Conservation of cofitness between GFF1566 and GFF459 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1566 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 1.0 GFF459 Outer membrane protein A precursor 0.50 14
Escherichia coli ECRC62 0.92 BNILDI_11300 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.87 BNILDI_03575 yiaD OmpA family lipoprotein — —
Escherichia coli ECOR38 0.91 HEPCGN_20150 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.87 HEPCGN_14915 yiaD OmpA family lipoprotein low > 85
Escherichia coli ECRC98 0.91 JDDGAC_24575 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.87 JDDGAC_19655 yiaD OmpA family lipoprotein — —
Escherichia coli ECRC101 0.91 MCAODC_11435 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.87 MCAODC_06540 yiaD OmpA family lipoprotein — —
Escherichia coli ECRC102 0.91 NIAGMN_18680 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.87 NIAGMN_13785 yiaD OmpA family lipoprotein — —
Escherichia coli ECRC99 0.91 KEDOAH_07225 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.87 KEDOAH_12125 yiaD OmpA family lipoprotein — —
Escherichia coli ECRC101 0.91 OKFHMN_20915 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.87 OKFHMN_16025 yiaD OmpA family lipoprotein — —
Klebsiella michiganensis M5al 0.91 BWI76_RS05620 NAD-dependent succinate-semialdehyde dehydrogenase 0.85 BWI76_RS26935 OmpA family lipoprotein low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_01071 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD 0.87 OHPLBJKB_00154 putative lipoprotein YiaD low > 73
Escherichia coli BL21 0.91 ECD_02517 succinate-semialdehyde dehydrogenase I, NADP-dependent 0.90 ECD_03402 multicopy suppressor of bamB; outer membrane lipoprotein low > 60
Escherichia coli BW25113 0.91 b2661 gabD succinate-semialdehyde dehydrogenase I, NADP-dependent (NCBI) 0.87 b3552 yiaD predicted outer membrane lipoprotien (NCBI) low > 76
Escherichia coli ECOR27 0.91 NOLOHH_12740 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.87 NOLOHH_07970 yiaD OmpA family lipoprotein low > 57
Escherichia fergusonii Becca 0.89 EFB2_01269 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD 0.88 EFB2_00255 putative lipoprotein YiaD low > 86
Escherichia coli Nissle 1917 0.89 ECOLIN_RS14840 NADP-dependent succinate-semialdehyde dehydrogenase 0.87 ECOLIN_RS20325 OmpA family lipoprotein low > 52
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_495 Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) (from data) 0.36 PfGW456L13_1624 Outer membrane protein assembly factor YaeT precursor low > 87
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS00910 NADP-dependent succinate-semialdehyde dehydrogenase 0.35 PFLU_RS04630 OmpA family lipoprotein low > 109
Pseudomonas fluorescens SBW25 0.83 PFLU_RS00910 NADP-dependent succinate-semialdehyde dehydrogenase 0.35 PFLU_RS04630 OmpA family lipoprotein low > 109
Pseudomonas sp. S08-1 0.83 OH686_11875 Succinate-semialdehyde dehydrogenase [NAD(P)+] 0.35 OH686_06290 Outer membrane porin, OmpA family — —
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_1734 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.36 Pf1N1B4_2964 Outer membrane protein assembly factor YaeT precursor low > 87
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_4014 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.35 Pf6N2E2_5327 Outer membrane protein assembly factor YaeT precursor low > 103
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_10720 succinate-semialdehyde dehydrogenase 0.35 AO356_17015 cell envelope biogenesis protein OmpA low > 104
Pseudomonas simiae WCS417 0.82 PS417_00895 succinate-semialdehyde dehydrogenase 0.34 PS417_04565 cell envelope biogenesis protein OmpA low > 88
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_11505 succinate-semialdehyde dehydrogenase (EC 1.2.1.16) (from data) 0.35 AO353_15165 cell envelope biogenesis protein OmpA low > 101
Pseudomonas sp. RS175 0.82 PFR28_04755 Glutarate-semialdehyde dehydrogenase 0.36 PFR28_00255 putative lipoprotein YiaD low > 88
Pseudomonas putida KT2440 0.82 PP_0213 succinate-semialdehyde dehydrogenase (NADP+) 0.34 PP_0773 OmpA/MotB domain-containing protein low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0091 succinate semialdehyde dehydrogenase 0.33 Psyr_1005 OmpA/MotB low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0091 succinate semialdehyde dehydrogenase 0.33 Psyr_1005 OmpA/MotB low > 86
Pseudomonas stutzeri RCH2 0.81 Psest_4237 succinate-semialdehyde dehydrogenase 0.49 Psest_3218 Outer membrane protein and related peptidoglycan-associated (lipo)proteins low > 67
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS21760 succinate-semialdehyde dehydrogenase 0.29 RR42_RS16015 membrane protein low > 128
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS11690 NADP-dependent succinate-semialdehyde dehydrogenase 0.26 QEN71_RS25020 OmpA family protein low > 153
Sinorhizobium meliloti 1021 0.72 SMc02780 succinate-semialdehyde dehydrogenase [NADP+] protein 0.37 SMc00354 hypothetical protein — —
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS05395 succinate-semialdehyde dehdyrogenase 0.22 HSERO_RS21940 membrane protein low > 78
Shewanella oneidensis MR-1 0.71 SO1275 gabD succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] (from data) 0.49 SO3969 OmpA family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.71 Shewana3_3092 succinate semialdehyde dehydrogenase (RefSeq) 0.48 Shewana3_0665 OmpA/MotB domain-containing protein (RefSeq) low > 73
Castellaniella sp019104865 MT123 0.69 ABCV34_RS09380 NADP-dependent succinate-semialdehyde dehydrogenase 0.23 ABCV34_RS10830 OmpA family protein low > 48
Shewanella amazonensis SB2B 0.69 Sama_2637 succinate-semialdehyde dehydrogenase (NAD(P)(+)) (RefSeq) 0.47 Sama_3096 OmpA family protein (RefSeq) low > 62
Agrobacterium fabrum C58 0.67 Atu4247 aldehyde dehydrogenase 0.35 Atu2722 porin low > 89
Serratia liquefaciens MT49 0.67 IAI46_16465 NADP-dependent succinate-semialdehyde dehydrogenase 0.73 IAI46_00110 OmpA family lipoprotein low > 86
Paraburkholderia graminis OAS925 0.66 ABIE53_005621 succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase 0.24 ABIE53_001266 outer membrane protein OmpA-like peptidoglycan-associated protein low > 113
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS22430 succinate-semialdehyde dehydrogenase 0.24 BPHYT_RS04960 membrane protein low > 109
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS09540 NAD-dependent succinate-semialdehyde dehydrogenase 0.27 RALBFv3_RS04400 OmpA family protein low > 76
Ralstonia solanacearum UW163 0.66 UW163_RS04040 NAD-dependent succinate-semialdehyde dehydrogenase 0.27 UW163_RS09270 OmpA family protein — —
Ralstonia solanacearum PSI07 0.66 RPSI07_RS23810 NAD-dependent succinate-semialdehyde dehydrogenase 0.27 RPSI07_RS12970 OmpA family protein low > 81
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_03178 succinate semialdehyde dehydrogenase 0.24 H281DRAFT_00156 Outer membrane protein OmpA low > 103
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS05195 NAD-dependent succinate-semialdehyde dehydrogenase 0.28 ABZR87_RS16255 OmpA family protein low > 80
Acinetobacter radioresistens SK82 0.65 MPMX26_01991 Glutarate-semialdehyde dehydrogenase 0.37 MPMX26_02417 putative lipoprotein YiaD low > 36
Ralstonia solanacearum GMI1000 0.64 RS_RS00140 NAD-dependent succinate-semialdehyde dehydrogenase 0.28 RS_RS11950 OmpA family lipoprotein low > 80
Phaeobacter inhibens DSM 17395 0.64 PGA1_c29650 succinate-semialdehyde dehdyrogenase GabD 0.37 PGA1_c29000 inner membrane lipoprotein low > 62
Rhizobium sp. OAE497 0.64 ABIE40_RS00140 NAD-dependent succinate-semialdehyde dehydrogenase 0.38 ABIE40_RS11645 OmpA family protein low > 107
Marinobacter adhaerens HP15 0.63 HP15_2020 succinate-semialdehyde dehydrogenase I 0.43 HP15_2555 OmpA/MotB domain protein low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF1556 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.21 GFF286 Outer membrane lipoprotein omp16 precursor — —
Dinoroseobacter shibae DFL-12 0.60 Dshi_2887 succinic semialdehyde dehydrogenase (RefSeq) 0.23 Dshi_3025 OmpA/MotB domain protein (RefSeq) low > 64
Caulobacter crescentus NA1000 Δfur 0.59 CCNA_03242 succinic semialdehyde dehydrogenase 0.34 CCNA_00201 outer membrane protein low > 67
Caulobacter crescentus NA1000 0.59 CCNA_03242 succinic semialdehyde dehydrogenase 0.34 CCNA_00201 outer membrane protein low > 66
Shewanella loihica PV-4 0.58 Shew_3173 succinic semialdehyde dehydrogenase (RefSeq) 0.47 Shew_0908 OmpA/MotB domain-containing protein (RefSeq) low > 60
Rahnella sp. WP5 0.58 EX31_RS12300 NAD-dependent succinate-semialdehyde dehydrogenase 0.69 EX31_RS05890 OmpA family lipoprotein low > 89
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_08760 NAD-dependent succinate-semialdehyde dehydrogenase 0.34 CSW01_06045 lipoprotein low > 62
Pantoea sp. MT58 0.57 IAI47_07580 NAD-dependent succinate-semialdehyde dehydrogenase 0.75 IAI47_00140 OmpA family lipoprotein low > 76
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3290 succinate-semialdehyde dehydrogenase 0.86 EX28DRAFT_3812 Outer membrane protein and related peptidoglycan-associated (lipo)proteins low > 76
Enterobacter sp. TBS_079 0.55 MPMX20_04145 Glutarate-semialdehyde dehydrogenase 0.86 MPMX20_00182 putative lipoprotein YiaD low > 85
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_1604 succinate-semialdehyde dehydrogenase 0.34 B158DRAFT_2386 Outer membrane protein and related peptidoglycan-associated (lipo)proteins low > 40
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS14760 NAD-dependent succinate-semialdehyde dehydrogenase 0.31 A4249_RS13240 OmpA family protein low > 48
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS09015 aldehyde dehydrogenase 0.17 ABI39_RS17430 OmpA family protein low > 72
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS13490 aldehyde dehydrogenase 0.17 HMPREF1058_RS03790 OmpA family protein low > 67
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS02505 aldehyde dehydrogenase 0.20 HMPREF1078_RS00515 OmpA family protein low > 61

Not shown: 16 genomes with orthologs for GFF1566 only; 6 genomes with orthologs for GFF459 only