| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_0673 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 1.0 | Psest_3931 | | Signal transduction histidine kinase, nitrogen specific | 0.30 | 6 |
| Pseudomonas sp. S08-1 | 0.87 | OH686_09400 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.87 | OH686_10635 | | Nitrogen regulation protein NtrB | low | > 80 |
| Pseudomonas simiae WCS417 | 0.86 | PS417_24800 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.86 | PS417_01640 | | histidine kinase | low | > 88 |
| Pseudomonas putida KT2440 | 0.86 | PP_0547 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.86 | PP_5047 | | two-component system sensory histidine kinase/phosphatase GlnL/GlnG | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.86 | PFLU_RS26735 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.86 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.86 | PFLU_RS26735 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.86 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.85 | Pf1N1B4_2676 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.86 | Pf1N1B4_1610 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.85 | AO353_06550 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.86 | AO353_12150 | | histidine kinase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.85 | Pf6N2E2_4982 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.87 | Pf6N2E2_3825 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.85 | Psyr_0630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.88 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.85 | Psyr_0630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.88 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.85 | PfGW456L13_1344 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.86 | PfGW456L13_346 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.85 | AO356_15235 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.87 | AO356_09725 | | histidine kinase | low | > 104 |
| Pseudomonas sp. RS175 | 0.84 | PFR28_03883 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.86 | PFR28_04945 | | Sensory histidine kinase/phosphatase NtrB | low | > 88 |
| Shewanella amazonensis SB2B | 0.66 | Sama_0769 | | UDP-N-acetylmuramate (RefSeq) | 0.40 | Sama_3426 | | nitrogen regulation protein (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.65 | MIT1002_00168 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.41 | MIT1002_03185 | | Nitrogen regulation protein NR(II) | low | > 70 |
| Shewanella loihica PV-4 | 0.65 | Shew_3144 | | UDP-N-acetylmuramate (RefSeq) | 0.39 | Shew_3560 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_12875 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.45 | CSW01_13860 | | nitrogen regulation protein NR(II) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.64 | SO3805 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) | 0.39 | SO4471 | ntrB | nitrogen regulation protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_0791 | | UDP-N-acetylmuramate (RefSeq) | 0.39 | Shewana3_0259 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.62 | MPMX26_03053 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.44 | MPMX26_01293 | | Sensory histidine kinase/phosphatase NtrB | low | > 36 |
| Marinobacter adhaerens HP15 | 0.62 | HP15_616 | | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.56 | HP15_426 | | signal transduction histidine kinase, nitrogen specific, NtrB | low | > 73 |
| Dechlorosoma suillum PS | 0.62 | Dsui_0384 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.41 | Dsui_1050 | | signal transduction histidine kinase, nitrogen specific | low | > 51 |
| Ralstonia solanacearum UW163 | 0.61 | UW163_RS07655 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.37 | UW163_RS12995 | | PAS domain-containing sensor histidine kinase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.61 | RALBFv3_RS05970 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.37 | RALBFv3_RS15535 | | PAS domain-containing sensor histidine kinase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.61 | ABZR87_RS01630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.35 | ABZR87_RS11065 | | nitrogen regulation protein NR(II) | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.61 | RPSI07_RS11275 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.36 | RPSI07_RS17820 | | PAS domain-containing sensor histidine kinase | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.61 | RS_RS13915 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.37 | RS_RS06315 | | PAS domain-containing sensor histidine kinase | low | > 80 |
| Serratia liquefaciens MT49 | 0.61 | IAI46_01800 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.42 | IAI46_24955 | | nitrogen regulation protein NR(II) | low | > 86 |
| Herbaspirillum seropedicae SmR1 | 0.61 | HSERO_RS01965 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.40 | HSERO_RS15685 | | histidine kinase | low | > 78 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.60 | OHPLBJKB_03802 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.42 | OHPLBJKB_04183 | | Sensory histidine kinase/phosphatase NtrB | low | > 73 |
| Escherichia coli BL21 | 0.60 | ECD_04101 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.42 | ECD_03754 | | sensory histidine kinase in two-component regulatory system with GlnG | low | > 60 |
| Escherichia coli ECRC62 | 0.60 | BNILDI_07315 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.42 | BNILDI_05295 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECRC98 | 0.60 | JDDGAC_15580 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.42 | JDDGAC_17730 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECRC101 | 0.60 | OKFHMN_11940 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.42 | OKFHMN_14105 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECRC99 | 0.60 | KEDOAH_16215 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.42 | KEDOAH_14045 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECOR38 | 0.60 | HEPCGN_10140 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.42 | HEPCGN_12735 | glnL | nitrogen regulation protein NR(II) | low | > 85 |
| Escherichia coli ECOR27 | 0.60 | NOLOHH_04200 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.42 | NOLOHH_06235 | glnL | nitrogen regulation protein NR(II) | low | > 57 |
| Escherichia fergusonii Becca | 0.60 | EFB2_04300 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.42 | EFB2_04747 | | Sensory histidine kinase/phosphatase NtrB | low | > 86 |
| Escherichia coli ECRC101 | 0.60 | MCAODC_02445 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.42 | MCAODC_04605 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli Nissle 1917 | 0.60 | ECOLIN_RS24560 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.42 | ECOLIN_RS22300 | | nitrogen regulation protein NR(II) | low | > 52 |
| Paraburkholderia sabiae LMG 24235 | 0.60 | QEN71_RS27145 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.36 | QEN71_RS05670 | | nitrogen regulation protein NR(II) | low | > 153 |
| Escherichia coli BW25113 | 0.60 | b4233 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (NCBI) | 0.42 | b3869 | glnL | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | low | > 76 |
| Klebsiella michiganensis M5al | 0.60 | BWI76_RS02820 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.41 | BWI76_RS00390 | | two-component system sensor histidine kinase NtrB | low | > 92 |
| Escherichia coli ECRC102 | 0.60 | NIAGMN_09790 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.42 | NIAGMN_11860 | glnL | nitrogen regulation protein NR(II) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.60 | RR42_RS17675 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.37 | RR42_RS12985 | | histidine kinase | low | > 128 |
| Erwinia tracheiphila SCR3 | 0.60 | LU632_RS02135 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.43 | LU632_RS22140 | glnL | nitrogen regulation protein NR(II) | low | > 74 |
| Enterobacter asburiae PDN3 | 0.60 | EX28DRAFT_3420 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.42 | EX28DRAFT_4351 | | Signal transduction histidine kinase, nitrogen specific | low | > 76 |
| Pantoea sp. MT58 | 0.60 | IAI47_02755 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.41 | IAI47_00455 | | nitrogen regulation protein NR(II) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF881 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.41 | GFF2221 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_00515 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.42 | MPMX20_04596 | | Sensory histidine kinase/phosphatase NtrB | low | > 85 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_06288 | | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.37 | H281DRAFT_00453 | | two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.59 | ABIE53_003563 | | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.37 | ABIE53_002805 | | two-component system nitrogen regulation sensor histidine kinase GlnL | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.59 | BPHYT_RS16990 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.36 | BPHYT_RS12940 | | signal transduction histidine kinase | low | > 109 |
| Dickeya dadantii 3937 | 0.59 | DDA3937_RS18580 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.42 | DDA3937_RS00130 | | nitrogen regulation protein NR(II) | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.59 | HER17_RS02615 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.41 | HER17_RS21435 | | nitrogen regulation protein NR(II) | low | > 75 |
| Dickeya dianthicola 67-19 | 0.58 | HGI48_RS18515 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.41 | HGI48_RS21230 | | nitrogen regulation protein NR(II) | low | > 71 |
| Dickeya dianthicola ME23 | 0.58 | DZA65_RS19650 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.41 | DZA65_RS22205 | | nitrogen regulation protein NR(II) | low | > 75 |
| Rahnella sp. WP5 | 0.58 | EX31_RS08665 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.42 | EX31_RS15875 | | nitrogen regulation protein NR(II) | low | > 89 |
| Kangiella aquimarina DSM 16071 | 0.57 | B158DRAFT_2035 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.29 | B158DRAFT_0715 | | Signal transduction histidine kinase, nitrogen specific | low | > 40 |
| Dyella japonica UNC79MFTsu3.2 | 0.56 | ABZR86_RS17365 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.31 | ABZR86_RS15510 | | ATP-binding protein | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.55 | LRK54_RS06610 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.27 | LRK54_RS07985 | | ATP-binding protein | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.55 | OKGIIK_17020 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase | 0.29 | OKGIIK_14470 | | PAS domain-containing sensor histidine kinase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.55 | LRK55_RS06355 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.26 | LRK55_RS07735 | | ATP-binding protein | low | > 63 |
| Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS10690 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.28 | ABCV34_RS03535 | | nitrogen regulation protein NR(II) | low | > 48 |
| Variovorax sp. SCN45 | 0.55 | GFF4445 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) | 0.34 | GFF3067 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 127 |
| Variovorax sp. OAS795 | 0.55 | ABID97_RS06355 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.34 | ABID97_RS09940 | | nitrogen regulation protein NR(II) | low | > 91 |
| Lysobacter sp. OAE881 | 0.51 | ABIE51_RS17450 | | Mur ligase family protein | 0.27 | ABIE51_RS01365 | | ATP-binding protein | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.50 | GFF583 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.37 | GFF5270 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | — | — |
| Acidovorax sp. GW101-3H11 | 0.48 | Ac3H11_4032 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.35 | Ac3H11_4431 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 79 |
Not shown: 3 genomes with orthologs for Psest_0673 only; 11 genomes with orthologs for Psest_3931 only