| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Sphingobium sp. HT1-2 | 1.0 | GFF4076 | | Two-component transcriptional response regulator, LuxR family | 1.0 | GFF377 | | Protein-export protein SecB (maintains pre-export unfolded state) | low | > 95 |
| Sphingomonas koreensis DSMZ 15582 | 0.90 | Ga0059261_1369 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 0.59 | Ga0059261_0802 | | protein-export chaperone SecB | low | > 68 |
| Rhodopseudomonas palustris CGA009 | 0.73 | TX73_009870 | | response regulator transcription factor | 0.47 | TX73_001570 | | protein-export chaperone SecB | low | > 86 |
| Agrobacterium fabrum C58 | 0.72 | Atu0970 | | two component response regulator | 0.33 | Atu0006 | | protein-export protein SECB | — | — |
| Sinorhizobium meliloti 1021 | 0.72 | SMc00458 | | transcriptional regulator | 0.34 | SMc02788 | | preprotein translocase subunit SecB | — | — |
| Azospirillum sp. SherDot2 | 0.71 | MPMX19_04078 | | Virulence transcriptional regulatory protein PhoP | 0.38 | MPMX19_02553 | | Protein-export protein SecB | low | > 112 |
| Rhizobium sp. OAE497 | 0.71 | ABIE40_RS05660 | | response regulator transcription factor | 0.38 | ABIE40_RS19265 | | protein-export chaperone SecB | low | > 107 |
| Bosea sp. OAE506 | 0.71 | ABIE41_RS21475 | | response regulator transcription factor | 0.39 | ABIE41_RS04630 | | protein-export chaperone SecB | low | > 77 |
| Azospirillum brasilense Sp245 | 0.69 | AZOBR_RS18790 | | transcriptional regulator | 0.39 | AZOBR_RS01720 | | preprotein translocase subunit SecB | low | > 97 |
| Xanthobacter sp. DMC5 | 0.66 | GFF3491 | | Transcriptional regulatory protein PhoP | 0.43 | GFF3714 | | Protein-export protein SecB | — | — |
| Magnetospirillum magneticum AMB-1 | 0.63 | AMB_RS00960 | | DNA-binding response regulator | 0.31 | AMB_RS22995 | | protein-export protein SecB | low | > 64 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.63 | A4249_RS15665 | | response regulator transcription factor | 0.35 | A4249_RS13480 | | protein-export chaperone SecB | low | > 48 |
| Rhodospirillum rubrum S1H | 0.62 | Rru_A3187 | | Two component Transcriptional regulator, Winged helix family (NCBI) | 0.36 | Rru_A3610 | | protein export chaperone SecB (NCBI) | low | > 58 |
| Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS15610 | | response regulator transcription factor | 0.29 | ABCV34_RS14255 | | protein-export chaperone SecB | low | > 48 |
| Caulobacter crescentus NA1000 | 0.61 | CCNA_02854 | | two-component response regulator | 0.35 | CCNA_03858 | | protein translocase subunit secB | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.61 | CCNA_02854 | | two-component response regulator | 0.35 | CCNA_03858 | | protein translocase subunit secB | low | > 67 |
| Vibrio cholerae E7946 ATCC 55056 | 0.59 | CSW01_08235 | | DNA-binding response regulator | 0.24 | CSW01_13410 | | protein-export protein SecB | low | > 62 |
| Shewanella amazonensis SB2B | 0.55 | Sama_3303 | | response regulator receiver protein (RefSeq) | 0.29 | Sama_0062 | | preprotein translocase subunit SecB (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.54 | SO4647 | | DNA-binding response regulator (NCBI ptt file) | 0.27 | SO0052 | secB | protein-export protein SecB (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.53 | Shew_2695 | | two component transcriptional regulator (RefSeq) | 0.27 | Shew_3804 | | preprotein translocase subunit SecB (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.53 | Shewana3_4025 | | two component transcriptional regulator (RefSeq) | 0.27 | Shewana3_0053 | | preprotein translocase subunit SecB (RefSeq) | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.52 | LRK53_RS17390 | | response regulator transcription factor | 0.33 | LRK53_RS03645 | | protein-export chaperone SecB | — | — |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_01421 | | Transcriptional regulatory protein PhoP | 0.28 | MIT1002_00486 | | Protein-export protein SecB | low | > 70 |
| Rhodanobacter denitrificans FW104-10B01 | 0.51 | LRK54_RS05985 | | response regulator transcription factor | 0.32 | LRK54_RS10855 | | protein-export chaperone SecB | low | > 59 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.51 | Xcc-8004.5008.1 | | Two-component system regulatory protein | 0.31 | Xcc-8004.270.1 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | — | — |
| Lysobacter sp. OAE881 | 0.51 | ABIE51_RS03940 | | response regulator transcription factor | 0.31 | ABIE51_RS00490 | | protein-export chaperone SecB | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.51 | LRK55_RS05740 | | response regulator transcription factor | 0.32 | LRK55_RS10545 | | protein-export chaperone SecB | — | — |
| Rhodanobacter sp. FW510-T8 | 0.50 | OKGIIK_00635 | ompR | DNA-binding response regulator | 0.32 | OKGIIK_13020 | secB | protein-export chaperone SecB | — | — |
| Marinobacter adhaerens HP15 | 0.50 | HP15_2937 | | two component transcriptional regulator, winged helix family | 0.30 | HP15_3003 | | protein-export protein SecB | low | > 73 |
| Dyella japonica UNC79MFTsu3.2 | 0.50 | ABZR86_RS18360 | | response regulator transcription factor | 0.31 | ABZR86_RS13255 | | protein-export chaperone SecB | — | — |
| Pseudomonas segetis P6 | 0.50 | MPMX49_02578 | | Transcriptional regulatory protein QseB | 0.27 | MPMX49_04291 | | Protein-export protein SecB | low | > 75 |
| Kangiella aquimarina DSM 16071 | 0.50 | B158DRAFT_1560 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 0.25 | B158DRAFT_0711 | | protein translocase subunit secB | — | — |
| Methylophilus sp. DMC18 | 0.48 | GFF417 | | Transcriptional regulatory protein QseB | 0.33 | GFF1796 | | Protein-export protein SecB | — | — |
| Pseudomonas aeruginosa PA14 | 0.48 | IKLFDK_13340 | | two-component system response regulator CarR | 0.27 | IKLFDK_27865 | | protein-export chaperone SecB | low | > 100 |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_3533 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 0.24 | Psest_0165 | | protein-export chaperone SecB | low | > 67 |
| Pseudomonas sp. SVBP6 | 0.47 | COO64_RS17260 | | response regulator transcription factor | 0.27 | COO64_RS13310 | secB | protein-export chaperone SecB | low | > 93 |
| Pseudomonas sp. DMC3 | 0.47 | GFF1365 | | Transcriptional regulatory protein QseB | 0.29 | GFF4086 | | Protein-export protein SecB | low | > 89 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_2451 | | Two-component system response regulator QseB | 0.30 | PfGW456L13_350 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_19775 | | transcriptional regulator | 0.30 | AO353_12130 | | preprotein translocase subunit SecB | low | > 101 |
| Pseudomonas sp. S08-1 | 0.46 | OH686_00055 | | Two-component system response regulator QseB | 0.26 | OH686_14670 | | protein-export chaperone SecB | low | > 80 |
| Pseudomonas sp. BP01 | 0.46 | JOY50_RS10885 | | response regulator transcription factor | 0.27 | JOY50_RS09435 | secB | protein-export chaperone SecB | — | — |
| Pseudomonas fluorescens SBW25 | 0.46 | PFLU_RS10435 | | response regulator transcription factor | 0.26 | PFLU_RS01670 | | protein-export chaperone SecB | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.46 | GEMAOFIL_02165 | | Transcriptional regulatory protein QseB | 0.27 | GEMAOFIL_00544 | | Protein-export protein SecB | low | > 93 |
| Pseudomonas fluorescens SBW25-INTG | 0.46 | PFLU_RS10435 | | response regulator transcription factor | 0.26 | PFLU_RS01670 | | protein-export chaperone SecB | low | > 109 |
| Pseudomonas putida KT2440 | 0.46 | PP_2347 | | DNA-binding response regulator | 0.27 | PP_5053 | | Protein-export protein SecB | low | > 96 |
| Pseudomonas sp. RS175 | 0.46 | PFR28_02847 | | Transcriptional regulatory protein QseB | 0.29 | PFR28_04941 | | Protein-export protein SecB | low | > 88 |
| Pseudomonas simiae WCS417 | 0.46 | PS417_10270 | | transcriptional regulator | 0.27 | PS417_01620 | | preprotein translocase subunit SecB | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_3212 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | 0.26 | Psyr_4882 | | protein translocase subunit secB | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_3212 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | 0.26 | Psyr_4882 | | protein translocase subunit secB | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_21280 | | transcriptional regulator | 0.30 | AO356_09755 | | preprotein translocase subunit SecB | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_41 | | Two-component system response regulator QseB | 0.30 | Pf6N2E2_3829 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.46 | Pf1N1B4_105 | | Two-component system response regulator QseB | 0.29 | Pf1N1B4_1614 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | — | — |
| Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_3057 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 0.29 | EX28DRAFT_3860 | | protein-export chaperone SecB | — | — |
| Erwinia amylovora T8 | 0.44 | OLJFJH_07175 | | two-component system response regulator PmrA | 0.30 | OLJFJH_05910 | | protein-export chaperone SecB | low | > 58 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.44 | GFF3138 | | Two-component system response regulator QseB | 0.30 | GFF401 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | low | > 78 |
| Rahnella sp. WP5 | 0.43 | EX31_RS08605 | | two-component system response regulator PmrA | 0.27 | EX31_RS14345 | | protein-export chaperone SecB | low | > 89 |
| Klebsiella michiganensis M5al | 0.43 | BWI76_RS24335 | | two-component system response regulator QseB | 0.28 | BWI76_RS27215 | | protein-export protein SecB | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.42 | OHPLBJKB_00677 | | Transcriptional regulatory protein QseB | 0.29 | OHPLBJKB_00090 | | Protein-export protein SecB | — | — |
| Dechlorosoma suillum PS | 0.42 | Dsui_2248 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | 0.34 | Dsui_1275 | | protein-export chaperone SecB | low | > 51 |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_03863 | | Transcriptional regulatory protein QseB | 0.29 | MPMX20_00124 | | Protein-export protein SecB | — | — |
| Escherichia coli BW25113 | 0.42 | b3025 | qseB | DNA-binding response regulator in two-component regulatory system with QseC (NCBI) | 0.29 | b3609 | secB | export protein SecB (NCBI) | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.42 | LU632_RS21175 | pmrA | two-component system response regulator PmrA | 0.28 | LU632_RS21880 | secB | protein-export chaperone SecB | low | > 74 |
| Escherichia fergusonii Becca | 0.42 | EFB2_00788 | | Transcriptional regulatory protein QseB | 0.29 | EFB2_00201 | | Protein-export protein SecB | — | — |
| Escherichia coli BL21 | 0.42 | ECD_02897 | | quorum sensing DNA-binding response regulator in two-component regulatory system with QseC | 0.29 | ECD_03467 | | protein export chaperone | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.42 | IJEDHG_13855 | pmrA | two-component system response regulator PmrA | 0.28 | IJEDHG_07915 | secB | protein-export chaperone SecB | — | — |
| Escherichia coli ECOR38 | 0.42 | HEPCGN_17740 | | Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC | 0.29 | HEPCGN_14590 | secB | protein-export chaperone SecB | — | — |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS11640 | | two-component system response regulator PhoP | 0.29 | HER17_RS20740 | | protein-export chaperone SecB | low | > 75 |
| Escherichia coli ECRC102 | 0.42 | NIAGMN_16645 | | Transcriptional regulatory protein QseB | 0.29 | NIAGMN_13510 | secB | protein-export chaperone SecB | low | > 80 |
| Escherichia coli ECRC99 | 0.42 | KEDOAH_09265 | | Transcriptional regulatory protein QseB | 0.29 | KEDOAH_12400 | secB | protein-export chaperone SecB | — | — |
| Escherichia coli ECRC100 | 0.42 | OKFHMN_18880 | | Transcriptional regulatory protein QseB | 0.29 | OKFHMN_15750 | secB | protein-export chaperone SecB | — | — |
| Escherichia coli ECRC101 | 0.42 | MCAODC_09395 | | Transcriptional regulatory protein QseB | 0.29 | MCAODC_06260 | secB | protein-export chaperone SecB | — | — |
| Escherichia coli ECRC62 | 0.42 | BNILDI_00855 | | Transcriptional regulatory protein QseB | 0.29 | BNILDI_03885 | secB | protein-export chaperone SecB | — | — |
| Escherichia coli ECOR27 | 0.42 | NOLOHH_10660 | | Transcriptional regulatory protein QseB | 0.29 | NOLOHH_07630 | secB | protein-export chaperone SecB | low | > 76 |
| Escherichia coli ECRC98 | 0.42 | JDDGAC_22515 | | Transcriptional regulatory protein QseB | 0.29 | JDDGAC_19375 | secB | protein-export chaperone SecB | — | — |
| Escherichia coli Nissle 1917 | 0.42 | ECOLIN_RS17425 | | quorum sensing response regulator transcription factor QseB | 0.29 | ECOLIN_RS20600 | | protein-export chaperone SecB | — | — |
| Klebsiella pneumoniae MKP103 | 0.41 | KDGMDA_05180 | | two-component system response regulator QseB | 0.28 | KDGMDA_07900 | | protein-export chaperone SecB | low | > 95 |
| Serratia liquefaciens MT49 | 0.41 | IAI46_10395 | | two-component system response regulator PhoP | 0.29 | IAI46_24695 | | protein-export chaperone SecB | low | > 86 |
| Ralstonia solanacearum PSI07 | 0.40 | RPSI07_RS08050 | | DNA-binding response regulator | 0.29 | RPSI07_RS22395 | | protein-export chaperone SecB | 0.39 | 44 |
Not shown: 7 genomes with orthologs for GFF4076 only; 13 genomes with orthologs for GFF377 only