| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_1772 | | Aspartate/tyrosine/aromatic aminotransferase | 1.0 | Psest_3818 | | endoribonuclease L-PSP, putative | 0.73 | 20 |
| Pseudomonas sp. RS175 | 0.93 | PFR28_00984 | | Glutamate-pyruvate aminotransferase AlaA | 0.89 | PFR28_04425 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_261 | | Aspartate aminotransferase (EC 2.6.1.1) | 0.89 | Pf1N1B4_2112 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.33 | 44 |
| Pseudomonas fluorescens FW300-N2E3 | 0.93 | AO353_19150 | | aminotransferase | 0.88 | AO353_09285 | | reactive intermediate/imine deaminase | 0.34 | 1 |
| Pseudomonas fluorescens GW456-L13 | 0.93 | PfGW456L13_2252 | | Aspartate aminotransferase (EC 2.6.1.1) | 0.88 | PfGW456L13_779 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.34 | 83 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_03090 | | aminotransferase | 0.88 | AO356_12475 | | reactive intermediate/imine deaminase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.92 | Pf6N2E2_2446 | | Aspartate aminotransferase (EC 2.6.1.1) | 0.89 | Pf6N2E2_4360 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | low | > 103 |
| Pseudomonas sp. S08-1 | 0.92 | OH686_22575 | | Alanine transaminase | 0.85 | OH686_13545 | | RidA/YER057c/UK114 superfamily protein | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.91 | Psyr_3615 | | Aminotransferase, class I and II | 0.85 | Psyr_0208 | | endoribonuclease L-PSP | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.91 | Psyr_3615 | | Aminotransferase, class I and II | 0.85 | Psyr_0208 | | endoribonuclease L-PSP | 0.41 | 54 |
| Pseudomonas simiae WCS417 | 0.91 | PS417_08560 | | aminotransferase | 0.88 | PS417_27835 | | endoribonuclease | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS08510 | | pyridoxal phosphate-dependent aminotransferase | 0.88 | PFLU_RS29515 | | RidA family protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS08510 | | pyridoxal phosphate-dependent aminotransferase | 0.88 | PFLU_RS29515 | | RidA family protein | low | > 109 |
| Pseudomonas putida KT2440 | 0.90 | PP_1872 | | glutamate-pyruvate aminotransferase | 0.91 | PP_5303 | | aminoacrylate/iminopropionate hydrolase/deaminase | low | > 96 |
| Serratia liquefaciens MT49 | 0.78 | IAI46_17720 | | pyridoxal phosphate-dependent aminotransferase | 0.39 | IAI46_02265 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.77 | GFF1894 | | Aspartate aminotransferase (EC 2.6.1.1) | 0.43 | GFF928 | | Endoribonuclease L-PSP | low | > 78 |
| Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_0319 | | Aspartate/tyrosine/aromatic aminotransferase | 0.39 | EX28DRAFT_3444 | | reactive intermediate/imine deaminase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.77 | MPMX20_03220 | | Glutamate-pyruvate aminotransferase AlaA | 0.40 | MPMX20_00542 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 85 |
| Klebsiella michiganensis M5al | 0.77 | BWI76_RS20205 | | aminotransferase AlaT | 0.42 | BWI76_RS02985 | | reactive intermediate/imine deaminase | low | > 92 |
| Escherichia coli BW25113 | 0.77 | b2290 | yfbQ | aspartate aminotransferase (NCBI) | 0.43 | b3113 | yhaR | orf, hypothetical protein (VIMSS) | low | > 76 |
| Escherichia coli ECOR38 | 0.77 | HEPCGN_22030 | alaA | alanine transaminase AlaA | 0.43 | HEPCGN_17255 | tdcF | enamine/imine deaminase | low | > 85 |
| Escherichia coli ECRC62 | 0.77 | BNILDI_13365 | alaA | alanine transaminase AlaA | 0.43 | BNILDI_01325 | tdcF | enamine/imine deaminase | — | — |
| Escherichia coli Nissle 1917 | 0.77 | ECOLIN_RS13295 | | alanine transaminase AlaA | 0.43 | ECOLIN_RS17920 | | enamine/imine deaminase | low | > 52 |
| Escherichia coli ECOR27 | 0.77 | NOLOHH_14445 | alaA | alanine transaminase AlaA | 0.43 | NOLOHH_10200 | tdcF | enamine/imine deaminase | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.77 | OHPLBJKB_01415 | | Glutamate-pyruvate aminotransferase AlaA | 0.43 | OHPLBJKB_00587 | | Putative reactive intermediate deaminase TdcF | low | > 73 |
| Escherichia fergusonii Becca | 0.77 | EFB2_01568 | | Glutamate-pyruvate aminotransferase AlaA | 0.43 | EFB2_00701 | | Putative reactive intermediate deaminase TdcF | low | > 86 |
| Escherichia coli BL21 | 0.77 | ECD_02215 | | glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase | 0.43 | ECD_02980 | | putative reactive intermediate deaminase | 0.39 | 51 |
| Escherichia coli ECRC101 | 0.76 | MCAODC_13865 | alaA | alanine transaminase AlaA | 0.43 | MCAODC_08935 | tdcF | enamine/imine deaminase | — | — |
| Escherichia coli ECRC101 | 0.76 | OKFHMN_22825 | alaA | alanine transaminase AlaA | 0.43 | OKFHMN_18420 | tdcF | enamine/imine deaminase | — | — |
| Escherichia coli ECRC99 | 0.76 | KEDOAH_05370 | alaA | alanine transaminase AlaA | 0.43 | KEDOAH_09725 | tdcF | enamine/imine deaminase | — | — |
| Escherichia coli ECRC102 | 0.76 | NIAGMN_20595 | alaA | alanine transaminase AlaA | 0.43 | NIAGMN_16185 | tdcF | enamine/imine deaminase | — | — |
| Escherichia coli ECRC98 | 0.76 | JDDGAC_26790 | alaA | alanine transaminase AlaA | 0.43 | JDDGAC_22055 | tdcF | enamine/imine deaminase | — | — |
| Pantoea sp. MT58 | 0.76 | IAI47_06350 | | pyridoxal phosphate-dependent aminotransferase | 0.42 | IAI47_16870 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.48 | 8 |
| Vibrio cholerae E7946 ATCC 55056 | 0.76 | CSW01_09870 | | pyridoxal phosphate-dependent aminotransferase | 0.42 | CSW01_12735 | | RidA family protein | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.75 | LU632_RS07955 | | pyridoxal phosphate-dependent aminotransferase | 0.39 | LU632_RS20960 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 74 |
| Dickeya dadantii 3937 | 0.75 | DDA3937_RS14345 | | pyridoxal phosphate-dependent aminotransferase | 0.42 | DDA3937_RS01915 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 74 |
| Dickeya dianthicola ME23 | 0.75 | DZA65_RS14995 | | pyridoxal phosphate-dependent aminotransferase | 0.40 | DZA65_RS01960 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.75 | HGI48_RS14320 | | pyridoxal phosphate-dependent aminotransferase | 0.41 | HGI48_RS01890 | | 2-iminobutanoate/2-iminopropanoate deaminase | — | — |
| Pectobacterium carotovorum WPP14 | 0.75 | HER17_RS07115 | | pyridoxal phosphate-dependent aminotransferase | 0.42 | HER17_RS19520 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 75 |
| Rahnella sp. WP5 | 0.74 | EX31_RS19445 | | pyridoxal phosphate-dependent aminotransferase | 0.42 | EX31_RS12775 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 89 |
| Marinobacter adhaerens HP15 | 0.72 | HP15_2095 | | aspartate aminotransferase | 0.73 | HP15_306 | | YjgF-like protein | 0.65 | 68 |
| Shewanella amazonensis SB2B | 0.71 | Sama_1697 | | aminotransferase AlaT (RefSeq) | 0.75 | Sama_0263 | | YjgF-like protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.71 | Shew_1914 | | aminotransferase AlaT (RefSeq) | 0.73 | Shew_3500 | | putative endoribonuclease L-PSP (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.70 | SO2483 | | aspartate aminotransferase, putative (NCBI ptt file) | 0.71 | SO0358 | | endoribonuclease L-PSP, putative (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.70 | Shewana3_2145 | | aminotransferase AlaT (RefSeq) | 0.70 | Shewana3_3813 | | putative endoribonuclease L-PSP (RefSeq) | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.70 | MPMX26_01871 | | Glutamate-pyruvate aminotransferase AlaA | 0.69 | MPMX26_02797 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 36 |
| Dechlorosoma suillum PS | 0.69 | Dsui_2908 | | aspartate/tyrosine/aromatic aminotransferase | 0.79 | Dsui_0312 | | endoribonuclease L-PSP, putative | — | — |
| Alteromonas macleodii MIT1002 | 0.69 | MIT1002_02306 | | Glutamate-pyruvate aminotransferase AlaA | 0.73 | MIT1002_00109 | | Putative reactive intermediate deaminase TdcF | low | > 70 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.69 | H281DRAFT_00809 | | alanine-synthesizing transaminase | 0.37 | H281DRAFT_01079 | | Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.69 | ABIE53_002025 | | alanine-synthesizing transaminase | 0.27 | ABIE53_003968 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.69 | RR42_RS12545 | | aminotransferase | 0.33 | RR42_RS16710 | | endoribonuclease L-PSP | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.68 | QEN71_RS22410 | | pyridoxal phosphate-dependent aminotransferase | 0.46 | QEN71_RS41190 | | RidA family protein | — | — |
| Burkholderia phytofirmans PsJN | 0.68 | BPHYT_RS08950 | | aminotransferase | 0.31 | BPHYT_RS29300 | | endoribonuclease L-PSP | low | > 109 |
| Ralstonia solanacearum GMI1000 | 0.68 | RS_RS06650 | | pyridoxal phosphate-dependent aminotransferase | 0.27 | RS_RS24425 | | RidA family protein | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.68 | RALBFv3_RS15870 | | pyridoxal phosphate-dependent aminotransferase | 0.37 | RALBFv3_RS20925 | | endoribonuclease L-PSP | low | > 76 |
| Ralstonia solanacearum UW163 | 0.68 | UW163_RS13315 | | pyridoxal phosphate-dependent aminotransferase | 0.37 | UW163_RS22060 | | endoribonuclease L-PSP | — | — |
| Ralstonia solanacearum PSI07 | 0.67 | RPSI07_RS17495 | | pyridoxal phosphate-dependent aminotransferase | 0.27 | RPSI07_RS06815 | | RidA family protein | low | > 81 |
| Variovorax sp. SCN45 | 0.67 | GFF2803 | | Alanine transaminase (EC 2.6.1.2) | 0.31 | GFF3442 | | RidA/YER057c/UK114 superfamily protein | low | > 127 |
| Variovorax sp. OAS795 | 0.67 | ABID97_RS10885 | | pyridoxal phosphate-dependent aminotransferase | 0.29 | ABID97_RS22895 | | RidA family protein | low | > 91 |
| Ralstonia sp. UNC404CL21Col | 0.66 | ABZR87_RS11440 | | pyridoxal phosphate-dependent aminotransferase | 0.32 | ABZR87_RS05790 | | RidA family protein | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.66 | GFF3934 | | Aspartate aminotransferase (EC 2.6.1.1) | 0.27 | GFF3622 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | low | > 90 |
| Bifidobacterium breve UCC2003 | 0.63 | BBR_RS15560 | | aminotransferase class V-fold PLP-dependent enzyme | 0.33 | BBR_RS12070 | | endoribonuclease L-PSP | low | > 34 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.62 | CA264_06065 | | aminotransferase | 0.39 | CA264_17590 | | RidA family protein | 0.42 | 16 |
| Lysobacter sp. OAE881 | 0.43 | ABIE51_RS18840 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.67 | ABIE51_RS17260 | | RidA family protein | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.40 | LRK55_RS10860 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.65 | LRK55_RS11525 | | RidA family protein | 0.60 | 59 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.39 | Xcc-8004.1010.1 | | Aspartate aminotransferase (EC 2.6.1.1) | 0.64 | Xcc-8004.1205.1 | | hypothetical protein | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.39 | LRK54_RS11155 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.65 | LRK54_RS11800 | | RidA family protein | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_12720 | aspB | aminotransferase | 0.65 | OKGIIK_12095 | ridA | reactive intermediate/imine deaminase | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.39 | ABZR86_RS12435 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.68 | ABZR86_RS11845 | | RidA family protein | low | > 74 |
| Azospirillum sp. SherDot2 | 0.21 | MPMX19_02392 | | Aspartate/prephenate aminotransferase | 0.31 | MPMX19_04018 | | 2-aminomuconate deaminase | low | > 112 |
| Rhizobium sp. OAE497 | 0.19 | ABIE40_RS12925 | | pyridoxal phosphate-dependent aminotransferase | 0.22 | ABIE40_RS21405 | | RidA family protein | low | > 107 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.19 | Echvi_0032 | | Aspartate/tyrosine/aromatic aminotransferase | 0.41 | Echvi_1327 | | endoribonuclease L-PSP, putative | low | > 79 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.15 | ABZR88_RS12100 | | pyridoxal phosphate-dependent aminotransferase | 0.41 | ABZR88_RS17245 | | RidA family protein | — | — |
| Fusobacterium nucleatum SB010 | 0.15 | HUW76_05840 | | pyridoxal phosphate-dependent aminotransferase | 0.42 | HUW76_10065 | | RidA family protein | 0.92 | 21 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.15 | CA265_RS11675 | | aspartate aminotransferase | 0.43 | CA265_RS22825 | | reactive intermediate/imine deaminase | 0.87 | 45 |
Not shown: 7 genomes with orthologs for Psest_1772 only; 18 genomes with orthologs for Psest_3818 only