Conservation of cofitness between PS417_05570 and PS417_18600 in Pseudomonas simiae WCS417

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_05570 DeoR faimly transcriptional regulator 1.0 PS417_18600 isopropylmalate isomerase 0.36 10
Pseudomonas fluorescens SBW25 0.99 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.99 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.99 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_1733 Glycerol-3-phosphate regulon repressor, DeoR family 0.94 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 87
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_768 Glycerol-3-phosphate regulon repressor, DeoR family 0.94 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_5573 Glycerol-3-phosphate regulon repressor, DeoR family 0.94 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 103
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_18245 DeoR family transcriptional regulator 0.94 AO356_21400 isopropylmalate isomerase low > 104
Pseudomonas sp. RS175 0.96 PFR28_03369 Glycerol-3-phosphate regulon repressor 0.93 PFR28_02824 3-isopropylmalate dehydratase large subunit 0.26 48
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_04185 DeoR family transcriptional regulator 0.94 AO353_20620 isopropylmalate isomerase low > 101
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_3906 regulatory protein, DeoR 0.92 Psyr_1983 3-isopropylmalate dehydratase, large subunit low > 86
Pseudomonas putida KT2440 0.91 PP_1074 DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate 0.90 PP_1985 3-isopropylmalate dehydratase large subunit low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_3906 regulatory protein, DeoR 0.92 Psyr_1983 3-isopropylmalate dehydratase, large subunit low > 86
Pseudomonas stutzeri RCH2 0.77 Psest_2774 Transcriptional regulators of sugar metabolism 0.86 Psest_2591 3-isopropylmalate dehydratase, large subunit
Pseudomonas sp. S08-1 0.74 OH686_20365 Glycerol-3-phosphate regulon repressor GlpR 0.88 OH686_04480 3-isopropylmalate dehydratase large subunit low > 80
Pectobacterium carotovorum WPP14 0.60 HER17_RS01530 DeoR/GlpR family transcriptional regulator 0.62 HER17_RS03075 3-isopropylmalate dehydratase large subunit low > 75
Dickeya dadantii 3937 0.59 DDA3937_RS19670 DeoR/GlpR family transcriptional regulator 0.62 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit low > 74
Dickeya dianthicola 67-19 0.59 HGI48_RS19800 DeoR/GlpR family transcriptional regulator 0.62 HGI48_RS18065 3-isopropylmalate dehydratase large subunit low > 71
Dickeya dianthicola ME23 0.59 DZA65_RS20890 DeoR/GlpR family transcriptional regulator 0.62 DZA65_RS19210 3-isopropylmalate dehydratase large subunit
Erwinia tracheiphila SCR3 0.58 LU632_RS23005 DeoR/GlpR family transcriptional regulator 0.57 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit low > 74
Serratia liquefaciens MT49 0.57 IAI46_23910 DeoR/GlpR family transcriptional regulator 0.59 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00281 Glycerol-3-phosphate regulon repressor 0.61 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia coli Nissle 1917 0.57 ECOLIN_RS19540 DeoR/GlpR family transcriptional regulator 0.61 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit
Escherichia fergusonii Becca 0.57 EFB2_00406 Glycerol-3-phosphate regulon repressor 0.61 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli BL21 0.57 ECD_03274 DNA-binding transcriptional repressor 0.61 ECD_00074 3-isopropylmalate dehydratase large subunit low > 61
Escherichia coli ECOR27 0.57 NOLOHH_08735 glpR DeoR/GlpR family transcriptional regulator 0.61 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 75
Escherichia coli ECRC98 0.57 JDDGAC_20570 glpR DeoR/GlpR family transcriptional regulator 0.61 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 86
Escherichia coli BW25113 0.57 b3423 glpR DNA-binding transcriptional repressor (NCBI) 0.61 b0072 leuC isopropylmalate isomerase large subunit (NCBI) low > 76
Escherichia coli ECRC101 0.57 MCAODC_07470 glpR DeoR/GlpR family transcriptional regulator 0.61 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 87
Escherichia coli ECRC102 0.57 NIAGMN_14710 glpR DeoR/GlpR family transcriptional regulator 0.61 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC62 0.57 BNILDI_02780 glpR DeoR/GlpR family transcriptional regulator 0.61 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 75
Escherichia coli ECOR38 0.57 HEPCGN_15760 glpR DeoR/GlpR family transcriptional regulator 0.61 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 87
Escherichia coli ECRC100 0.57 OKFHMN_16940 glpR DeoR/GlpR family transcriptional regulator 0.61 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 80
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_18830 DeoR/GlpR family transcriptional regulator 0.59 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Escherichia coli ECRC99 0.57 KEDOAH_11200 glpR DeoR/GlpR family transcriptional regulator 0.61 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF590 Glycerol-3-phosphate regulon repressor, DeoR family 0.60 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Pantoea sp. MT58 0.56 IAI47_01765 DeoR/GlpR family transcriptional regulator 0.61 IAI47_16010 3-isopropylmalate dehydratase large subunit low > 76
Rahnella sp. WP5 0.56 EX31_RS04995 DeoR/GlpR family transcriptional regulator 0.62 EX31_RS03690 3-isopropylmalate dehydratase large subunit low > 89
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.472.1 Glycerol-3-phosphate regulon repressor, DeoR family 0.86 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 74
Klebsiella michiganensis M5al 0.56 BWI76_RS26175 DeoR/GlpR family transcriptional regulator 0.60 BWI76_RS04670 3-isopropylmalate dehydratase large subunit low > 92
Enterobacter asburiae PDN3 0.56 EX28DRAFT_4123 transcriptional regulator, DeoR family 0.61 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit low > 76
Enterobacter sp. TBS_079 0.55 MPMX20_04306 Glycerol-3-phosphate regulon repressor 0.60 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 low > 85
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_04225 transcriptional regulator, DeoR family 0.72 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit low > 103
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS02250 DeoR/GlpR family DNA-binding transcription regulator 0.72 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.46 70
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS16470 DeoR faimly transcriptional regulator 0.72 BPHYT_RS33915 isopropylmalate isomerase low > 109
Alteromonas macleodii MIT1002 0.53 MIT1002_00199 Glycerol-3-phosphate regulon repressor 0.58 MIT1002_00947 3-isopropylmalate dehydratase large subunit low > 70
Paraburkholderia graminis OAS925 0.52 ABIE53_003465 DeoR family glycerol-3-phosphate regulon repressor 0.72 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit low > 113
Sinorhizobium meliloti 1021 0.52 SMc02521 glycerol-3-phosphate regulon repressor transcription regulator protein 0.65 SMc03823 isopropylmalate isomerase large subunit 0.58 13
Marinobacter adhaerens HP15 0.51 HP15_2167 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein 0.78 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain 0.36 66
Variovorax sp. SCN45 0.51 GFF2678 Glycerol-3-phosphate regulon repressor GlpR 0.70 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 127
Variovorax sp. OAS795 0.51 ABID97_RS19960 DeoR/GlpR family DNA-binding transcription regulator 0.70 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Agrobacterium fabrum C58 0.50 Atu3898 DeoR family transcriptional regulator 0.63 Atu2709 3-isopropylmalate dehydratase, large subunit low > 89
Azospirillum brasilense Sp245 0.50 AZOBR_RS25600 DeoR faimly transcriptional regulator 0.67 AZOBR_RS03545 isopropylmalate isomerase
Rhizobium sp. OAE497 0.49 ABIE40_RS17880 DeoR/GlpR family DNA-binding transcription regulator 0.62 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit low > 107
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS13795 DeoR family transcriptional regulator 0.73 RR42_RS14400 isopropylmalate isomerase
Ralstonia solanacearum GMI1000 0.48 RS_RS15295 DeoR/GlpR transcriptional regulator 0.72 RS_RS10000 3-isopropylmalate dehydratase large subunit low > 80
Ralstonia solanacearum PSI07 0.48 RPSI07_RS09890 DeoR/GlpR transcriptional regulator 0.72 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit low > 81
Ralstonia solanacearum UW163 0.48 UW163_RS06265 DeoR/GlpR transcriptional regulator 0.72 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS07355 DeoR/GlpR transcriptional regulator 0.72 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit low > 76
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS03015 DeoR/GlpR family DNA-binding transcription regulator 0.72 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit low > 80
Azospirillum sp. SherDot2 0.47 MPMX19_05965 Glycerol-3-phosphate regulon repressor 0.67 MPMX19_01998 3-isopropylmalate dehydratase large subunit low > 112
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS04835 DeoR faimly transcriptional regulator 0.71 HSERO_RS16515 isopropylmalate isomerase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF2808 Glycerol-3-phosphate regulon repressor, DeoR family 0.69 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Rhodopseudomonas palustris CGA009 0.44 TX73_022865 DeoR/GlpR family DNA-binding transcription regulator 0.62 TX73_001245 3-isopropylmalate dehydratase large subunit
Dinoroseobacter shibae DFL-12 0.43 Dshi_0631 transcriptional regulator, DeoR family (RefSeq) 0.59 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.33 PGA1_c08250 putative glycerol-3-phosphate regulon repressor glpR 0.60 PGA1_c29780 3-isopropylmalate dehydratase large subunit low > 62
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_2626 transcriptional regulator, DeoR family 0.59 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.48 40
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS11450 transcriptional repressor AgaR 0.60 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Rhodanobacter denitrificans MT42 0.24 LRK55_RS11180 transcriptional repressor AgaR 0.60 LRK55_RS07105 3-isopropylmalate dehydratase large subunit low > 63
Bosea sp. OAE506 0.24 ABIE41_RS02380 DeoR/GlpR family DNA-binding transcription regulator 0.65 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Rhodospirillum rubrum S1H 0.23 Rru_A1265 Transcriptional Regulator, DeoR family (NCBI) 0.68 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI) low > 58
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_11465 transcriptional regulator 0.54 CA264_09435 3-isopropylmalate dehydratase large subunit low > 74
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS01995 DeoR/GlpR transcriptional regulator 0.51 ABI39_RS10200 3-isopropylmalate dehydratase large subunit
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS02715 DeoR/GlpR transcriptional regulator 0.51 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit low > 67

Not shown: 1 genomes with orthologs for PS417_05570 only; 28 genomes with orthologs for PS417_18600 only