Conservation of cofitness between Psest_3338 and Psest_2845 in Pseudomonas stutzeri RCH2

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3338 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 1.0 Psest_2845 [Protein-PII] uridylyltransferase 0.30 12
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_5048 Dna binding response regulator PrrA (RegA) 0.81 PfGW456L13_4711 [Protein-PII] uridylyltransferase (EC 2.7.7.59) low > 87
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_4230 Helix-turn-helix, Fis-type 0.80 Psyr_1341 Protein-P-II uridylyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_4230 Helix-turn-helix, Fis-type 0.80 Psyr_1341 Protein-P-II uridylyltransferase low > 86
Pseudomonas fluorescens SBW25 0.86 PFLU_RS04140 response regulator transcription factor 0.81 PFLU_RS06265 [protein-PII] uridylyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS04140 response regulator transcription factor 0.81 PFLU_RS06265 [protein-PII] uridylyltransferase low > 109
Pseudomonas simiae WCS417 0.86 PS417_04100 chemotaxis protein CheY 0.81 PS417_06200 protein-PII uridylyltransferase — —
Pseudomonas sp. RS175 0.86 PFR28_00137 Photosynthetic apparatus regulatory protein RegA 0.79 PFR28_00394 Bifunctional uridylyltransferase/uridylyl-removing enzyme — —
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_05335 chemotaxis protein CheY 0.81 AO353_16450 protein-PII uridylyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_1115 Dna binding response regulator PrrA (RegA) 0.81 Pf1N1B4_3081 [Protein-PII] uridylyltransferase (EC 2.7.7.59) low > 87
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_3302 Dna binding response regulator PrrA (RegA) 0.81 Pf6N2E2_3072 [Protein-PII] uridylyltransferase (EC 2.7.7.59) — —
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_07205 chemotaxis protein CheY 0.81 AO356_06050 protein-PII uridylyltransferase — —
Pseudomonas putida KT2440 0.84 PP_0888 Photosynthetic apparatus regulatory protein RegA 0.80 PP_1589 uridylyltransferase low > 96
Pseudomonas sp. S08-1 0.84 OH686_08680 Dna binding response regulator PrrA (RegA) 0.83 OH686_06495 protein-P-II uridylyltransferase low > 80
Dechlorosoma suillum PS 0.59 Dsui_1180 response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein 0.34 Dsui_2696 (protein-PII) uridylyltransferase low > 51
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS10115 response regulator transcription factor 0.31 ABZR86_RS21575 [protein-PII] uridylyltransferase — —
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_10900 two-component system response regulator 0.32 OKGIIK_10125 glnD [protein-PII] uridylyltransferase — —
Rhodanobacter denitrificans MT42 0.53 LRK55_RS03810 response regulator transcription factor 0.33 LRK55_RS02995 [protein-PII] uridylyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS04040 response regulator transcription factor 0.33 LRK54_RS03245 [protein-PII] uridylyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_02208 two component transcriptional regulator, Fis family 0.32 H281DRAFT_00608 UTP--GlnB (protein PII) uridylyltransferase, GlnD — —
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS01625 chemotaxis protein CheY 0.32 BPHYT_RS12150 PII uridylyl-transferase low > 109
Paraburkholderia graminis OAS925 0.50 ABIE53_000420 two-component system response regulator RegA 0.31 ABIE53_002507 [protein-PII] uridylyltransferase — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS00325 response regulator transcription factor 0.31 QEN71_RS06410 [protein-PII] uridylyltransferase — —
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS13000 chemotaxis protein CheY 0.33 HSERO_RS10865 PII uridylyl-transferase low > 78
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS01085 chemotaxis protein CheY 0.30 RR42_RS11885 (protein-PII) uridylyltransferase low > 128
Dinoroseobacter shibae DFL-12 0.47 Dshi_3430 two component transcriptional regulator, Fis family (RefSeq) 0.22 Dshi_2833 UTP-GlnB uridylyltransferase, GlnD (RefSeq) — —
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS05135 response regulator transcription factor 0.31 ABZR87_RS11815 [protein-PII] uridylyltransferase — —
Caulobacter crescentus NA1000 0.46 CCNA_01845 two-component response regulator protein 0.22 CCNA_00013 protein-PII uridylyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.46 CCNA_01845 two-component response regulator protein 0.22 CCNA_00013 protein-PII uridylyltransferase — —
Ralstonia solanacearum GMI1000 0.46 RS_RS00200 DNA-binding response regulator 0.31 RS_RS07035 bifunctional uridylyltransferase/uridylyl-removing protein — —
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_1932 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 0.39 B158DRAFT_1072 UTP--GlnB (protein PII) uridylyltransferase, GlnD low > 40
Ralstonia solanacearum PSI07 0.45 RPSI07_RS23750 DNA-binding response regulator 0.32 RPSI07_RS17110 [protein-PII] uridylyltransferase low > 81
Ralstonia solanacearum UW163 0.45 UW163_RS03965 DNA-binding response regulator 0.31 UW163_RS13695 [protein-PII] uridylyltransferase — —
Marinobacter adhaerens HP15 0.45 HP15_3981 two component transcriptional regulator, Fis family 0.51 HP15_1163 [protein-PII] uridylyltransferase low > 73
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS09615 DNA-binding response regulator 0.31 RALBFv3_RS00365 [protein-PII] uridylyltransferase 0.38 24
Rhizobium sp. OAE497 0.45 ABIE40_RS19505 ActR/PrrA/RegA family redox response regulator transcription factor 0.23 ABIE40_RS01765 [protein-PII] uridylyltransferase low > 107
Sinorhizobium meliloti 1021 0.45 SMc02584 transcriptional regulator 0.24 SMc01124 PII uridylyl-transferase — —
Agrobacterium fabrum C58 0.44 Atu0050 two component response regulator 0.24 Atu0346 uridylyltransferase/uridylyl-removing enzyme UTase low > 89
Shewanella amazonensis SB2B 0.43 Sama_3186 response regulator receiver protein (RefSeq) 0.38 Sama_1137 PII uridylyl-transferase (RefSeq) low > 62
Phaeobacter inhibens DSM 17395 0.43 PGA1_c35390 photosynthetic apparatus regulatory protein RegA 0.21 PGA1_c26750 uridylyltransferase GlnD — —
Rhodopseudomonas palustris CGA009 0.43 TX73_002960 ActR/PrrA/RegA family redox response regulator transcription factor 0.23 TX73_003060 [protein-PII] uridylyltransferase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.3041.1 Dna binding response regulator PrrA (RegA) 0.32 Xcc-8004.3543.1 [Protein-PII] uridylyltransferase (EC 2.7.7.59) — —
Bosea sp. OAE506 0.42 ABIE41_RS21050 response regulator transcription factor 0.23 ABIE41_RS00205 [protein-PII] uridylyltransferase low > 77
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS04475 response regulator transcription factor 0.23 A4249_RS13590 [protein-PII] uridylyltransferase low > 48
Azospirillum sp. SherDot2 0.42 MPMX19_06181 Photosynthetic apparatus regulatory protein RegA 0.25 MPMX19_00912 Bifunctional uridylyltransferase/uridylyl-removing enzyme — —
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3147 Dna binding response regulator PrrA (RegA) 0.30 Ac3H11_537 [Protein-PII] uridylyltransferase (EC 2.7.7.59) — —
Variovorax sp. OAS795 0.41 ABID97_RS07610 response regulator transcription factor 0.30 ABID97_RS15665 [protein-PII] uridylyltransferase low > 91
Variovorax sp. SCN45 0.41 GFF5672 Dna binding response regulator PrrA (RegA) 0.30 GFF1322 [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme 0.78 14
Shewanella sp. ANA-3 0.41 Shewana3_3707 response regulator receiver protein (RefSeq) 0.37 Shewana3_2817 PII uridylyl-transferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.41 SO4172 DNA-binding response regulator (NCBI ptt file) 0.37 SO1626 glnD protein-P-II uridylyltransferase (NCBI ptt file) low > 76
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1560 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 0.24 Ga0059261_2737 UTP--GlnB (protein PII) uridylyltransferase, GlnD low > 68
Azospirillum brasilense Sp245 0.40 AZOBR_RS23150 chemotaxis protein CheY 0.24 AZOBR_RS02110 protein-PII uridylyltransferase low > 97
Shewanella loihica PV-4 0.40 Shew_3342 two component Fis family transcriptional regulator (RefSeq) 0.37 Shew_2637 PII uridylyl-transferase (RefSeq) low > 60

Not shown: 1 genomes with orthologs for Psest_3338 only; 35 genomes with orthologs for Psest_2845 only