Conservation of cofitness between Psest_2317 and Psest_2316 in Pseudomonas stutzeri RCH2

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2317 Uncharacterized protein conserved in bacteria 1.0 Psest_2316 phosphoenolpyruvate synthase 0.34 4
Pseudomonas sp. S08-1 0.90 OH686_01665 Phosphoenolpyruvate synthase regulatory protein 0.92 OH686_01660 phosphoenolpyruvate synthase low > 80
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_2089 Protein of unknown function DUF299 0.89 Psyr_2090 phosphoenolpyruvate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_2089 Protein of unknown function DUF299 0.89 Psyr_2090 phosphoenolpyruvate synthase low > 86
Pseudomonas sp. RS175 0.88 PFR28_01037 Phosphoenolpyruvate synthase regulatory protein 0.89 PFR28_01038 Phosphoenolpyruvate synthase low > 88
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_00875 transcriptional regulator 0.90 AO353_00865 phosphoenolpyruvate synthase 0.39 12
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_02830 transcriptional regulator 0.89 AO356_02825 phosphoenolpyruvate synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_2391 FIG137360: hypothetical protein 0.89 Pf6N2E2_2389 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 103
Pseudomonas putida KT2440 0.87 PP_2081 putative phosphoenolpyruvate synthase regulatory protein 0.91 PP_2082 phosphoenolpyruvate synthetase 0.45 4
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3824 FIG137360: hypothetical protein 0.90 Pf1N1B4_3826 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 87
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS22635 kinase/pyrophosphorylase 0.91 PFLU_RS22630 phosphoenolpyruvate synthase low > 109
Pseudomonas simiae WCS417 0.87 PS417_21025 PEP synthetase regulatory protein 0.91 PS417_21020 phosphoenolpyruvate synthase 0.41 1
Pseudomonas fluorescens SBW25 0.87 PFLU_RS22635 kinase/pyrophosphorylase 0.91 PFLU_RS22630 phosphoenolpyruvate synthase low > 109
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_4113 FIG137360: hypothetical protein 0.89 PfGW456L13_4112 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 87
Marinobacter adhaerens HP15 0.69 HP15_2230 phosphotransferase YdiA 0.81 HP15_2229 phosphoenolpyruvate synthase 0.68 1
Acinetobacter radioresistens SK82 0.56 MPMX26_01167 Phosphoenolpyruvate synthase regulatory protein 0.79 MPMX26_01166 Phosphoenolpyruvate synthase — —
Kangiella aquimarina DSM 16071 0.55 B158DRAFT_1552 Uncharacterized protein conserved in bacteria 0.74 B158DRAFT_1553 phosphoenolpyruvate synthase (EC 2.7.9.2) low > 40
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS07245 pyruvate, water dikinase regulatory protein 0.67 ABZR86_RS07250 phosphoenolpyruvate synthase low > 74
Rahnella sp. WP5 0.51 EX31_RS13940 kinase/pyrophosphorylase 0.71 EX31_RS13935 phosphoenolpyruvate synthase low > 89
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS00470 kinase/pyrophosphorylase 0.66 RALBFv3_RS00475 phosphoenolpyruvate synthase — —
Ralstonia solanacearum UW163 0.51 UW163_RS13800 kinase/pyrophosphorylase 0.65 UW163_RS13805 phosphoenolpyruvate synthase — —
Dechlorosoma suillum PS 0.51 Dsui_2678 hypothetical protein 0.70 Dsui_2677 phosphoenolpyruvate synthase — —
Ralstonia solanacearum PSI07 0.51 RPSI07_RS17020 kinase/pyrophosphorylase 0.66 RPSI07_RS17015 phosphoenolpyruvate synthase — —
Ralstonia solanacearum GMI1000 0.51 RS_RS07125 phosphoenolpyruvate synthase regulatory protein 0.66 RS_RS07130 phosphoenolpyruvate synthase — —
Alteromonas macleodii MIT1002 0.51 MIT1002_01815 Phosphoenolpyruvate synthase regulatory protein 0.72 MIT1002_01816 Phosphoenolpyruvate synthase low > 70
Shewanella amazonensis SB2B 0.51 Sama_2073 hypothetical protein (RefSeq) 0.72 Sama_2072 phosphoenolpyruvate synthase (RefSeq) 0.39 39
Shewanella oneidensis MR-1 0.51 SO2645 conserved hypothetical protein (NCBI ptt file) 0.71 SO2644 ppsA phosphoenolpyruvate synthase (NCBI ptt file) 0.34 19
Shewanella sp. ANA-3 0.51 Shewana3_1735 hypothetical protein (RefSeq) 0.71 Shewana3_1736 phosphoenolpyruvate synthase (RefSeq) low > 73
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS16875 kinase/pyrophosphorylase 0.68 LRK54_RS16870 phosphoenolpyruvate synthase low > 59
Rhodanobacter denitrificans MT42 0.51 LRK55_RS16590 pyruvate, water dikinase regulatory protein 0.68 LRK55_RS16585 phosphoenolpyruvate synthase low > 63
Serratia liquefaciens MT49 0.51 IAI46_11110 kinase/pyrophosphorylase 0.71 IAI46_11115 phosphoenolpyruvate synthase low > 86
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS06500 pyruvate, water dikinase regulatory protein 0.66 QEN71_RS06505 phosphoenolpyruvate synthase 0.42 11
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_07965 ppsR phosphoenolpyruvate synthase regulatory protein 0.68 OKGIIK_07970 ppsA phosphoenolpyruvate synthase low > 52
Shewanella loihica PV-4 0.50 Shew_1548 hypothetical protein (RefSeq) 0.71 Shew_1549 phosphoenolpyruvate synthase (RefSeq) — —
Pantoea sp. MT58 0.50 IAI47_10910 kinase/pyrophosphorylase 0.71 IAI47_10905 phosphoenolpyruvate synthase low > 76
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS11795 PEP synthetase regulatory protein 0.67 RR42_RS11790 phosphoenolpyruvate synthase 0.71 1
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS11920 pyruvate, water dikinase regulatory protein 0.66 ABZR87_RS11925 phosphoenolpyruvate synthase — —
Acidovorax sp. GW101-3H11 0.50 Ac3H11_207 FIG137360: hypothetical protein 0.67 Ac3H11_206 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 79
Dickeya dianthicola 67-19 0.50 HGI48_RS12880 kinase/pyrophosphorylase 0.72 HGI48_RS12875 phosphoenolpyruvate synthase low > 71
Pectobacterium carotovorum WPP14 0.50 HER17_RS08880 kinase/pyrophosphorylase 0.71 HER17_RS08885 phosphoenolpyruvate synthase low > 75
Dickeya dianthicola ME23 0.50 DZA65_RS13345 kinase/pyrophosphorylase 0.71 DZA65_RS13340 phosphoenolpyruvate synthase low > 75
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_00626 hypothetical protein 0.66 H281DRAFT_00627 phosphoenolpyruvate synthase — —
Paraburkholderia graminis OAS925 0.50 ABIE53_002487 regulator of PEP synthase PpsR (kinase-PPPase family) 0.66 ABIE53_002485 pyruvate,water dikinase 0.51 1
Dickeya dadantii 3937 0.49 DDA3937_RS12810 kinase/pyrophosphorylase 0.71 DDA3937_RS12805 phosphoenolpyruvate synthase low > 74
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS12060 hypothetical protein 0.67 BPHYT_RS12055 phosphoenolpyruvate synthase 0.16 96
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF3919 FIG137360: hypothetical protein 0.68 GFF3920 Phosphoenolpyruvate synthase (EC 2.7.9.2) — —
Lysobacter sp. OAE881 0.49 ABIE51_RS09530 pyruvate, water dikinase regulatory protein 0.66 ABIE51_RS09520 phosphoenolpyruvate synthase low > 62
Escherichia coli ECRC101 0.49 MCAODC_18270 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.71 MCAODC_18265 ppsA phosphoenolpyruvate synthase — —
Escherichia coli ECRC102 0.49 NIAGMN_00925 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.71 NIAGMN_00920 ppsA phosphoenolpyruvate synthase — —
Escherichia fergusonii Becca 0.49 EFB2_02288 Phosphoenolpyruvate synthase regulatory protein 0.71 EFB2_02289 Phosphoenolpyruvate synthase low > 86
Escherichia coli BL21 0.49 ECD_01672 PEP synthase kinase and PEP synthase pyrophosphorylase 0.71 ECD_01671 phosphoenolpyruvate synthase — —
Escherichia coli ECRC99 0.49 KEDOAH_00970 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.71 KEDOAH_00965 ppsA phosphoenolpyruvate synthase — —
Escherichia coli ECOR38 0.49 HEPCGN_05505 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.71 HEPCGN_05510 ppsA phosphoenolpyruvate synthase low > 85
Escherichia coli ECOR27 0.49 NOLOHH_17660 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.71 NOLOHH_17665 ppsA phosphoenolpyruvate synthase — —
Escherichia coli ECRC101 0.49 OKFHMN_27140 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.71 OKFHMN_27145 ppsA phosphoenolpyruvate synthase — —
Castellaniella sp019104865 MT123 0.49 ABCV34_RS04030 pyruvate, water dikinase regulatory protein 0.67 ABCV34_RS04025 phosphoenolpyruvate synthase — —
Escherichia coli ECRC62 0.49 BNILDI_16450 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.71 BNILDI_16455 ppsA phosphoenolpyruvate synthase — —
Escherichia coli Nissle 1917 0.49 ECOLIN_RS09520 posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.71 ECOLIN_RS09510 phosphoenolpyruvate synthase — —
Escherichia coli ECRC98 0.49 JDDGAC_01715 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.71 JDDGAC_01720 ppsA phosphoenolpyruvate synthase — —
Escherichia coli BW25113 0.49 b1703 ydiA hypothetical protein (NCBI) 0.71 b1702 pps phosphoenolpyruvate synthase (NCBI) 0.19 25
Variovorax sp. SCN45 0.48 GFF2819 Phosphoenolpyruvate synthase regulatory protein 0.67 GFF2818 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 127
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF3537 FIG137360: hypothetical protein 0.71 GFF3539 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 78
Variovorax sp. OAS795 0.48 ABID97_RS10810 pyruvate, water dikinase regulatory protein 0.67 ABID97_RS10815 phosphoenolpyruvate synthase — —
Enterobacter sp. TBS_079 0.48 MPMX20_01921 Phosphoenolpyruvate synthase regulatory protein 0.71 MPMX20_01922 Phosphoenolpyruvate synthase low > 85
Klebsiella michiganensis M5al 0.48 BWI76_RS17070 phosphoenolpyruvate synthase regulatory protein 0.71 BWI76_RS17065 phosphoenolpyruvate synthase low > 92
Erwinia tracheiphila SCR3 0.48 LU632_RS11015 kinase/pyrophosphorylase 0.70 LU632_RS11025 ppsA phosphoenolpyruvate synthase low > 74
Enterobacter asburiae PDN3 0.47 EX28DRAFT_1705 Uncharacterized protein conserved in bacteria 0.72 EX28DRAFT_1704 phosphoenolpyruvate synthase (EC 2.7.9.2) low > 76
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.2415.1 FIG137360: hypothetical protein 0.66 Xcc-8004.2412.1 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 74
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_19045 phosphoenolpyruvate synthase regulatory protein 0.71 CSW01_19050 phosphoenolpyruvate synthase low > 62

Not shown: 14 genomes with orthologs for Psest_2317 only; 4 genomes with orthologs for Psest_2316 only