Conservation of cofitness between GFF4229 and GFF2018 in Hydrogenophaga sp. GW460-11-11-14-LB1

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4229 Exopolyphosphatase (EC 3.6.1.11) 1.0 GFF2018 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 0.73 7
Acidovorax sp. GW101-3H11 0.62 Ac3H11_455 Exopolyphosphatase (EC 3.6.1.11) 0.89 Ac3H11_4956 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA low > 79
Variovorax sp. SCN45 0.60 GFF1091 Exopolyphosphatase (EC 3.6.1.11) 0.83 GFF3336 tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmG
Variovorax sp. OAS795 0.59 ABID97_RS14590 Ppx/GppA phosphatase family protein 0.84 ABID97_RS02905 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS04855 exopolyphosphatase 0.75 QEN71_RS29345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04419 Ppx/GppA phosphatase 0.75 H281DRAFT_02385 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Dechlorosoma suillum PS 0.34 Dsui_2813 exopolyphosphatase 0.71 Dsui_0846 glucose-inhibited division protein A low > 51
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS14105 exopolyphosphatase 0.75 BPHYT_RS19440 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
Ralstonia solanacearum PSI07 0.33 RPSI07_RS15335 exopolyphosphatase 0.75 RPSI07_RS08410 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Ralstonia solanacearum GMI1000 0.33 RS_RS07710 exopolyphosphatase 0.75 RS_RS16675 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Ralstonia solanacearum UW163 0.33 UW163_RS15420 exopolyphosphatase 0.75 UW163_RS04745 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS02110 exopolyphosphatase 0.75 RALBFv3_RS08865 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS14060 exopolyphosphatase 0.75 ABZR87_RS04125 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.36 63
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS13430 exopolyphosphatase 0.71 RR42_RS20215 tRNA uridine 5-carboxymethylaminomethyl modification protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_0294 Exopolyphosphatase 0.66 Psyr_5132 Glucose-inhibited division protein A subfamily low > 86
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_0294 Exopolyphosphatase 0.66 Psyr_5132 Glucose-inhibited division protein A subfamily low > 86
Pseudomonas putida KT2440 0.32 PP_5216 exopolyphosphatase 0.66 PP_0004 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_875 Exopolyphosphatase (EC 3.6.1.11) 0.66 PfGW456L13_671 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_12900 exopolyphosphatase 0.65 AO356_11665 tRNA uridine 5-carboxymethylaminomethyl modification protein
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4454 Exopolyphosphatase (EC 3.6.1.11) 0.65 Pf6N2E2_4203 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Pseudomonas simiae WCS417 0.32 PS417_27425 exopolyphosphatase 0.66 PS417_28520 tRNA uridine 5-carboxymethylaminomethyl modification protein
Pseudomonas sp. RS175 0.32 PFR28_04344 Exopolyphosphatase 0.66 PFR28_04587 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS29090 exopolyphosphatase 0.66 PFLU_RS30175 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Pseudomonas fluorescens SBW25 0.32 PFLU_RS29090 exopolyphosphatase 0.66 PFLU_RS30175 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Pseudomonas stutzeri RCH2 0.32 Psest_3731 exopolyphosphatase 0.65 Psest_4365 glucose-inhibited division protein A
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS09440 exopolyphosphatase 0.76 HSERO_RS23965 tRNA uridine 5-carboxymethylaminomethyl modification protein
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_08880 exopolyphosphatase 0.66 AO353_10445 tRNA uridine 5-carboxymethylaminomethyl modification protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_2209 Exopolyphosphatase (EC 3.6.1.11) 0.66 Pf1N1B4_1934 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Pseudomonas sp. S08-1 0.31 OH686_11275 Exopolyphosphatase 0.65 OH686_12660 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Castellaniella sp019104865 MT123 0.30 ABCV34_RS15575 Ppx/GppA phosphatase family protein 0.62 ABCV34_RS11725 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Enterobacter sp. TBS_079 0.30 MPMX20_03357 Exopolyphosphatase 0.62 MPMX20_04626 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG low > 85
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0165 exopolyphosphatase 0.62 EX28DRAFT_4017 glucose-inhibited division protein A
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_03775 exopolyphosphatase 0.62 CSW01_14055 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 62
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.4065.1 Exopolyphosphatase (EC 3.6.1.11) 0.59 Xcc-8004.488.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA low > 74
Rhodanobacter denitrificans MT42 0.29 LRK55_RS14730 Ppx/GppA phosphatase family protein 0.60 LRK55_RS09830 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS15015 Ppx/GppA family phosphatase 0.60 LRK54_RS10190 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 16
Klebsiella michiganensis M5al 0.29 BWI76_RS21000 exopolyphosphatase 0.62 BWI76_RS00230 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Lysobacter sp. OAE881 0.29 ABIE51_RS14235 exopolyphosphatase 0.59 ABIE51_RS01205 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 62
Erwinia tracheiphila SCR3 0.29 LU632_RS24270 gppA guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.61 LU632_RS24815 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Pantoea sp. MT58 0.29 IAI47_18540 guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.63 IAI47_00300 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 76
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS00705 Ppx/GppA phosphatase family protein 0.60 ABZR86_RS15760 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 74
Rahnella sp. WP5 0.29 EX31_RS22675 exopolyphosphatase 0.63 EX31_RS06140 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 89
Acinetobacter radioresistens SK82 0.29 MPMX26_00569 Exopolyphosphatase 0.61 MPMX26_01147 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG low > 36
Serratia liquefaciens MT49 0.29 IAI46_00570 exopolyphosphatase 0.62 IAI46_25110 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 86
Dickeya dianthicola 67-19 0.29 HGI48_RS15230 exopolyphosphatase 0.63 HGI48_RS21380 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.67 63
Dickeya dadantii 3937 0.29 DDA3937_RS15155 exopolyphosphatase 0.62 DDA3937_RS21605 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 74
Dickeya dianthicola ME23 0.29 DZA65_RS16050 exopolyphosphatase 0.62 DZA65_RS22360 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 75
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_03775 ppx exopolyphosphatase 0.60 OKGIIK_13725 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 52
Pectobacterium carotovorum WPP14 0.28 HER17_RS06420 exopolyphosphatase 0.63 HER17_RS21600 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 75
Escherichia coli ECRC102 0.28 NIAGMN_12360 gppA guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.63 NIAGMN_12540 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Escherichia coli ECRC100 0.28 OKFHMN_14605 gppA guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.63 OKFHMN_14785 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 80
Escherichia coli ECRC98 0.28 JDDGAC_18225 gppA guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.63 JDDGAC_18405 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 86
Escherichia coli ECRC101 0.28 MCAODC_05110 gppA guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.63 MCAODC_05290 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_04275 'Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase' transl_table=11 0.63 OHPLBJKB_04312 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
Escherichia coli BW25113 0.28 b3779 gpp guanosine pentaphosphatase/exopolyphosphatase (NCBI) 0.63 b3741 gidA glucose-inhibited division protein A (NCBI) low > 76
Escherichia coli ECRC99 0.28 KEDOAH_13545 gppA guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.63 KEDOAH_13365 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
Escherichia coli BL21 0.28 ECD_03657 guanosine pentaphosphatase/exopolyphosphatase 0.63 ECD_03625 5-methylaminomethyl-2-thiouridine modification at tRNA U34 low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF2166 Exopolyphosphatase (EC 3.6.1.11) 0.62 GFF1716 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA low > 78
Escherichia coli ECOR27 0.28 NOLOHH_06740 gppA guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.63 NOLOHH_06920 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 75
Escherichia coli ECRC62 0.28 BNILDI_04785 gppA guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.63 BNILDI_04605 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 75
Alteromonas macleodii MIT1002 0.28 MIT1002_00871 Exopolyphosphatase 0.62 MIT1002_04124 Glucose-inhibited division protein A low > 70
Escherichia coli ECOR38 0.28 HEPCGN_13315 gppA guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.63 HEPCGN_13500 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.83 25
Escherichia coli Nissle 1917 0.28 ECOLIN_RS21695 guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.63 ECOLIN_RS21515 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 55
Escherichia fergusonii Becca 0.28 EFB2_04859 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 0.63 EFB2_04892 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 0.59 28
Shewanella oneidensis MR-1 0.27 SO2185 ppx exopolyphosphatase (NCBI ptt file) 0.63 SO4758 gidA glucose-inhibited division protein A (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.27 Shewana3_2418 Ppx/GppA phosphatase (RefSeq) 0.62 Shewana3_0002 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (RefSeq) low > 73
Shewanella amazonensis SB2B 0.26 Sama_2012 guanosine-5'-triphosphate,3'-diphosphate diphosphatase (RefSeq) 0.63 Sama_3655 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (RefSeq)
Marinobacter adhaerens HP15 0.26 HP15_228 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 0.63 HP15_3690 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_2313 Exopolyphosphatase 0.64 B158DRAFT_0377 glucose-inhibited division protein A low > 40
Shewanella loihica PV-4 0.24 Shew_3078 Ppx/GppA phosphatase (RefSeq) 0.64 Shew_3856 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (RefSeq)
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_0477 Exopolyphosphatase 0.46 Echvi_1059 glucose-inhibited division protein A

Not shown: 0 genomes with orthologs for GFF4229 only; 28 genomes with orthologs for GFF2018 only