Conservation of cofitness between GFF4297 and GFF2017 in Hydrogenophaga sp. GW460-11-11-14-LB1

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4297 FIG001341: Probable Fe(2+)-trafficking protein YggX 1.0 GFF2017 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.69 9
Variovorax sp. SCN45 0.86 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.55 GFF3337 16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170) low > 127
Variovorax sp. OAS795 0.86 ABID97_RS15460 oxidative damage protection protein 0.56 ABID97_RS02910 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia solanacearum UW163 0.82 UW163_RS12845 oxidative damage protection protein 0.42 UW163_RS04750 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS15385 oxidative damage protection protein 0.42 RALBFv3_RS08860 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia solanacearum PSI07 0.81 RPSI07_RS17970 Fe(2+)-trafficking protein 0.42 RPSI07_RS08415 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS11010 oxidative damage protection protein 0.42 ABZR87_RS04120 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Ralstonia solanacearum GMI1000 0.81 RS_RS06190 Fe(2+)-trafficking protein 0.41 RS_RS16670 ribosomal RNA small subunit methyltransferase G — —
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_00443 Fe-S cluster biosynthesis and repair protein YggX 0.37 H281DRAFT_02386 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) — —
Cupriavidus basilensis FW507-4G11 0.79 RR42_RS13040 iron transporter 0.36 RR42_RS20210 16S rRNA methyltransferase low > 128
Acidovorax sp. GW101-3H11 0.79 Ac3H11_580 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.62 Ac3H11_4955 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Dechlorosoma suillum PS 0.78 Dsui_1571 Fe-S cluster protector protein 0.32 Dsui_0847 16S rRNA (guanine(527)-N(7))-methyltransferase GidB low > 51
Paraburkholderia graminis OAS925 0.77 ABIE53_002815 Fe-S cluster biosynthesis and repair protein YggX 0.37 ABIE53_000263 16S rRNA (guanine527-N7)-methyltransferase low > 113
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS05615 oxidative damage protection protein 0.36 QEN71_RS29340 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 153
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS12990 iron transporter 0.36 BPHYT_RS19435 16S rRNA methyltransferase low > 109
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_02560 yggX oxidative damage protection protein 0.38 OKGIIK_15445 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 52
Rhodanobacter denitrificans MT42 0.61 LRK55_RS13060 oxidative damage protection protein 0.38 LRK55_RS08445 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 63
Rhodanobacter denitrificans FW104-10B01 0.61 LRK54_RS13320 oxidative damage protection protein 0.38 LRK54_RS08680 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 59
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0206 Fe-S cluster protector protein 0.31 B158DRAFT_0378 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) 0.46 25
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS19970 oxidative damage protection protein 0.36 ABZR86_RS14875 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Alteromonas macleodii MIT1002 0.55 MIT1002_00240 putative Fe(2+)-trafficking protein 0.37 MIT1002_04123 Ribosomal RNA small subunit methyltransferase G low > 70
Shewanella amazonensis SB2B 0.55 Sama_2491 hypothetical protein (RefSeq) 0.29 Sama_3654 gidB 16S rRNA methyltransferase GidB (RefSeq) 0.34 45
Shewanella sp. ANA-3 0.55 Shewana3_1180 hypothetical protein (RefSeq) 0.30 Shewana3_0001 gidB 16S rRNA methyltransferase GidB (RefSeq) low > 73
Shewanella oneidensis MR-1 0.55 SO3369 conserved hypothetical protein (NCBI ptt file) 0.30 SO4757 gidB glucose-inhibited division protein B (NCBI ptt file) low > 76
Castellaniella sp019104865 MT123 0.54 ABCV34_RS02400 oxidative damage protection protein 0.41 ABCV34_RS11720 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 48
Marinobacter adhaerens HP15 0.53 HP15_3016 Ion traffic superfamily protein 0.32 HP15_3689 glucose-inhibited division protein B low > 73
Pseudomonas stutzeri RCH2 0.53 Psest_0144 Fe-S cluster protector protein 0.31 Psest_4364 16S rRNA (guanine(527)-N(7))-methyltransferase GidB low > 67
Pseudomonas sp. S08-1 0.53 OH686_14545 Probable Fe(2+)-trafficking protein YggX 0.35 OH686_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Pseudomonas simiae WCS417 0.52 PS417_01540 iron transporter 0.35 PS417_28515 16S rRNA methyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_09835 iron transporter 0.37 AO356_11670 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 104
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS01585 oxidative damage protection protein 0.35 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas putida KT2440 0.51 PP_0285 Fe(2+)-trafficking protein 0.38 PP_0003 16S RNA methyltransferase — —
Lysobacter sp. OAE881 0.51 ABIE51_RS15145 oxidative damage protection protein 0.32 ABIE51_RS01740 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Pseudomonas fluorescens SBW25 0.51 PFLU_RS01585 oxidative damage protection protein 0.35 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_02405 Fe(2+)-trafficking protein 0.33 CSW01_14050 ribosomal RNA small subunit methyltransferase G — —
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.37 Pf6N2E2_4204 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 103
Shewanella loihica PV-4 0.49 Shew_1122 hypothetical protein (RefSeq) 0.29 Shew_3855 gidB glucose-inhibited division protein B (RefSeq) low > 60
Serratia liquefaciens MT49 0.49 IAI46_21470 oxidative damage protection protein 0.31 IAI46_25115 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 86
Dickeya dadantii 3937 0.49 DDA3937_RS04895 oxidative damage protection protein 0.31 DDA3937_RS21600 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.51 46
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.2121.1 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.30 Xcc-8004.5135.1 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_12045 iron transporter 0.37 AO353_10440 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 101
Pseudomonas sp. RS175 0.48 PFR28_04924 putative Fe(2+)-trafficking protein 0.38 PFR28_04586 Ribosomal RNA small subunit methyltransferase G low > 88
Dickeya dianthicola ME23 0.48 DZA65_RS05240 oxidative damage protection protein 0.30 DZA65_RS22365 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS04905 oxidative damage protection protein 0.31 HGI48_RS21385 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 71
Pantoea sp. MT58 0.48 IAI47_03555 oxidative damage protection protein 0.33 IAI47_00295 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Escherichia coli Nissle 1917 0.47 ECOLIN_RS16475 oxidative damage protection protein 0.32 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 52
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_367 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.37 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 87
Erwinia tracheiphila SCR3 0.47 LU632_RS05415 oxidative damage protection protein 0.32 LU632_RS24810 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_4902 Protein of unknown function DUF495 0.35 Psyr_5131 16S rRNA m(7)G-527 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_4902 Protein of unknown function DUF495 0.35 Psyr_5131 16S rRNA m(7)G-527 methyltransferase 0.29 78
Escherichia coli ECRC101 0.47 OKFHMN_19195 yggX oxidative damage protection protein 0.32 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC102 0.47 NIAGMN_16960 yggX oxidative damage protection protein 0.32 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00754 putative Fe(2+)-trafficking protein 0.32 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G low > 73
Escherichia coli ECRC101 0.47 MCAODC_09715 yggX oxidative damage protection protein 0.32 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli BL21 0.47 ECD_02792 oxidative damage protective factor for iron-sulfur proteins 0.32 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein low > 60
Escherichia coli ECRC62 0.47 BNILDI_09640 yggX oxidative damage protection protein 0.32 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia fergusonii Becca 0.47 EFB2_00940 putative Fe(2+)-trafficking protein 0.32 EFB2_04893 Ribosomal RNA small subunit methyltransferase G low > 86
Pectobacterium carotovorum WPP14 0.47 HER17_RS16630 oxidative damage protection protein 0.31 HER17_RS21605 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Enterobacter sp. TBS_079 0.47 MPMX20_03819 putative Fe(2+)-trafficking protein 0.32 MPMX20_04627 Ribosomal RNA small subunit methyltransferase G low > 85
Escherichia coli ECOR27 0.47 NOLOHH_11055 yggX oxidative damage protection protein 0.32 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 57
Escherichia coli BW25113 0.47 b2962 yggX hypothetical protein (NCBI) 0.32 b3740 gidB glucose-inhibited division protein B (NCBI) low > 76
Escherichia coli ECRC99 0.47 KEDOAH_08945 yggX oxidative damage protection protein 0.32 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC98 0.47 JDDGAC_22825 yggX oxidative damage protection protein 0.32 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECOR38 0.47 HEPCGN_18465 yggX oxidative damage protection protein 0.32 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3066 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.32 GFF1717 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 78
Klebsiella michiganensis M5al 0.46 BWI76_RS24160 Fe(2+)-trafficking protein 0.32 BWI76_RS00225 16S rRNA methyltransferase G — —
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_1632 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.36 Pf1N1B4_1935 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2999 Fe-S cluster protector protein 0.33 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Acinetobacter radioresistens SK82 0.46 MPMX26_00184 putative Fe(2+)-trafficking protein 0.33 MPMX26_01214 Ribosomal RNA small subunit methyltransferase G low > 36
Rahnella sp. WP5 0.46 EX31_RS02740 oxidative damage protection protein 0.29 EX31_RS06135 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 89

Not shown: 1 genomes with orthologs for GFF4297 only; 3 genomes with orthologs for GFF2017 only