Conservation of cofitness between GFF4227 and GFF1520 in Sphingobium sp. HT1-2

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF4227 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 1.0 GFF1520 Protein containing domains DUF404, DUF407 0.88 3
Agrobacterium fabrum C58 0.71 Atu4617 dTDP-D-glucose-4,6-dehydratase 0.61 Atu2338 hypothetical protein low > 89
Rhizobium sp. OAE497 0.70 ABIE40_RS08670 dTDP-glucose 4,6-dehydratase 0.61 ABIE40_RS14005 circularly permuted type 2 ATP-grasp protein low > 107
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_03744 dTDP-glucose 4,6-dehydratase 0.49 CCNA_01674 circularly permuted ATP-grasp type 2 protein low > 67
Caulobacter crescentus NA1000 0.65 CCNA_03744 dTDP-glucose 4,6-dehydratase 0.49 CCNA_01674 circularly permuted ATP-grasp type 2 protein low > 66
Xanthobacter sp. DMC5 0.63 GFF1115 dTDP-glucose 4,6-dehydratase 2 0.60 GFF1129 putative protein
Klebsiella pneumoniae MKP103 0.60 KDGMDA_26190 dTDP-glucose 4 6-dehydratase 0.59 KDGMDA_25015 Circularly permuted ATP-grasp type 2 low > 95
Rahnella sp. WP5 0.60 EX31_RS11515 dTDP-glucose 4,6-dehydratase 0.58 EX31_RS12770 circularly permuted type 2 ATP-grasp protein
Dickeya dianthicola ME23 0.59 DZA65_RS07110 dTDP-glucose 4,6-dehydratase 0.60 DZA65_RS01940 circularly permuted type 2 ATP-grasp protein low > 75
Rhodospirillum rubrum S1H 0.59 Rru_B0050 dTDP-glucose 4,6-dehydratase (NCBI) 0.59 Rru_A3390 hypothetical protein (NCBI) low > 58
Dickeya dianthicola 67-19 0.59 HGI48_RS06755 dTDP-glucose 4,6-dehydratase 0.60 HGI48_RS01870 circularly permuted type 2 ATP-grasp protein low > 71
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_10040 dTDP-glucose 4,6-dehydratase 0.58 AO356_20375 hypothetical protein
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3878 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.58 Pf6N2E2_5995 Protein containing domains DUF404, DUF407
Pseudomonas sp. RS175 0.59 PFR28_04894 dTDP-glucose 4,6-dehydratase 2 0.57 PFR28_01625 hypothetical protein
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_11885 dTDP-glucose 4,6-dehydratase 0.58 AO353_01180 hypothetical protein
Azospirillum sp. SherDot2 0.58 MPMX19_06725 dTDP-glucose 4,6-dehydratase 2 0.48 MPMX19_01348 hypothetical protein
Pseudomonas sp. SVBP6 0.58 COO64_RS00570 rfbB dTDP-glucose 4,6-dehydratase 0.58 COO64_RS06175 circularly permuted type 2 ATP-grasp protein
Pseudomonas simiae WCS417 0.58 PS417_01330 dTDP-glucose 4,6-dehydratase 0.57 PS417_21245 hypothetical protein
Pseudomonas segetis P6 0.58 MPMX49_02877 dTDP-glucose 4,6-dehydratase 2 0.56 MPMX49_02777 hypothetical protein
Pantoea sp. MT58 0.58 IAI47_18500 dTDP-glucose 4,6-dehydratase 0.59 IAI47_07235 circularly permuted type 2 ATP-grasp protein
Pseudomonas fluorescens SBW25 0.58 PFLU_RS01425 dTDP-glucose 4,6-dehydratase 0.58 PFLU_RS22865 circularly permuted type 2 ATP-grasp protein
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS01425 dTDP-glucose 4,6-dehydratase 0.58 PFLU_RS22865 circularly permuted type 2 ATP-grasp protein
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_4935 dTDP-glucose 4,6-dehydratase 0.57 Psyr_1869 Protein of unknown function DUF404:Protein of unknown function DUF407 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_4935 dTDP-glucose 4,6-dehydratase 0.57 Psyr_1869 Protein of unknown function DUF404:Protein of unknown function DUF407 low > 86
Serratia liquefaciens MT49 0.58 IAI46_00610 dTDP-glucose 4,6-dehydratase 0.59 IAI46_02250 circularly permuted type 2 ATP-grasp protein low > 87
Pseudomonas orientalis W4I3 0.58 QF045_RS04450 dTDP-glucose 4,6-dehydratase 0.58 QF045_RS23330 circularly permuted type 2 ATP-grasp protein
Marinobacter adhaerens HP15 0.58 HP15_p187g47 dTDP-glucose 4,6-dehydratase 0.48 HP15_3594 uncharacterized conserved protein UCP005522 low > 73
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_5939 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.58 Pf1N1B4_3790 Protein containing domains DUF404, DUF407 low > 87
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_02615 dTDP-glucose 4,6-dehydratase 2 0.58 GEMAOFIL_04391 hypothetical protein low > 96
Bosea sp. OAE506 0.57 ABIE41_RS02850 dTDP-glucose 4,6-dehydratase 0.60 ABIE41_RS13805 circularly permuted type 2 ATP-grasp protein low > 77
Pseudomonas sp. S08-1 0.57 OH686_14380 dTDP-glucose 4,6-dehydratase 0.58 OH686_22280 Protein containing domains DUF404, DUF407
Pseudomonas sp. DMC3 0.56 GFF4669 dTDP-glucose 4,6-dehydratase 0.58 GFF2645 putative protein
Klebsiella michiganensis M5al 0.55 BWI76_RS19065 dTDP-glucose 4,6-dehydratase 0.59 BWI76_RS17680 hypothetical protein low > 92
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_3099 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.55 Ga0059261_3690 Uncharacterized conserved protein low > 68
Paraburkholderia graminis OAS925 0.54 ABIE53_001137 dTDP-glucose 4,6-dehydratase 0.59 ABIE53_004164 putative circularly permuted ATP-grasp superfamily protein
Azospirillum brasilense Sp245 0.54 AZOBR_RS33415 dTDP-glucose 4 6-dehydratase 0.48 AZOBR_RS20035 hypothetical protein low > 97
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_04822 dTDP-glucose 4,6-dehydratase 0.60 H281DRAFT_03134 Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_2200 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.58 PfGW456L13_4152 Protein containing domains DUF404, DUF407
Acinetobacter radioresistens SK82 0.53 MPMX26_00450 dTDP-glucose 4,6-dehydratase 2 0.49 MPMX26_01149 hypothetical protein
Dinoroseobacter shibae DFL-12 0.53 Dshi_4115 dTDP-glucose 4,6-dehydratase (RefSeq) 0.59 Dshi_3242 protein of unknown function DUF404 (RefSeq) low > 64
Ralstonia solanacearum PSI07 0.53 RPSI07_RS20615 dTDP-glucose 4,6-dehydratase 0.59 RPSI07_RS18590 circularly permuted type 2 ATP-grasp protein
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS04265 dTDP-glucose 4,6-dehydratase 0.59 BPHYT_RS22075 hypothetical protein
Pseudomonas putida KT2440 0.53 PP_1785 dTDP-glucose 4,6-dehydratase 2 0.58 PP_2688 conserved protein of unknown function
Ralstonia solanacearum UW163 0.53 UW163_RS00920 dTDP-glucose 4,6-dehydratase 0.59 UW163_RS12240 circularly permuted type 2 ATP-grasp protein
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS08645 dTDP-glucose 4,6-dehydratase 0.58 ABZR87_RS10430 circularly permuted type 2 ATP-grasp protein low > 80
Synechococcus elongatus PCC 7942 0.53 Synpcc7942_2100 rfbB dTDP-glucose 4,6-dehydratase 0.51 Synpcc7942_1032 hypothetical protein low > 38
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS12645 dTDP-glucose 4,6-dehydratase 0.59 RALBFv3_RS14770 circularly permuted type 2 ATP-grasp protein
Ralstonia solanacearum GMI1000 0.53 RS_RS03430 dTDP-glucose 4,6-dehydratase 0.59 RS_RS05580 circularly permuted type 2 ATP-grasp protein
Magnetospirillum magneticum AMB-1 0.52 AMB_RS00295 dTDP-glucose 4,6-dehydratase 0.47 AMB_RS04180 circularly permuted type 2 ATP-grasp protein
Sinorhizobium meliloti 1021 0.52 SM_b21326 dTDP-D-glucose 4,6-dehydratase 0.61 SM_b20886 hypothetical protein low > 103
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS25755 dTDP-glucose 4,6-dehydratase 0.59 QEN71_RS18385 circularly permuted type 2 ATP-grasp protein
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS15840 spore coat protein 0.58 RR42_RS06135 hypothetical protein
Methylophilus sp. DMC18 0.51 GFF1321 dTDP-glucose 4,6-dehydratase 0.61 GFF2132 putative protein
Pseudomonas sp. BP01 0.50 JOY50_RS16040 rfbB dTDP-glucose 4,6-dehydratase 0.58 JOY50_RS03000 circularly permuted type 2 ATP-grasp protein
Variovorax sp. OAS795 0.50 ABID97_RS05660 dTDP-glucose 4,6-dehydratase 0.56 ABID97_RS19985 circularly permuted type 2 ATP-grasp protein
Variovorax sp. SCN45 0.50 GFF6882 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.56 GFF2683 Protein containing domains DUF404, DUF407
Pseudomonas aeruginosa PUPa3 0.49 DQ20_RS50445 rfbB;go_function=dTDP-glucose dTDP-glucose 4 6-dehydratase 0.57 DQ20_RS54415 circularly permuted type 2 ATP-grasp protein
Pseudomonas aeruginosa MRSN321 0.49 DY961_RS11655 rfbB;go_function=dTDP-glucose dTDP-glucose 4 6-dehydratase 0.57 DY961_RS20325 circularly permuted type 2 ATP-grasp protein
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1880 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.55 Ac3H11_265 Protein containing domains DUF404, DUF407
Pseudomonas aeruginosa PA14 0.49 IKLFDK_27680 dTDP-glucose 4 6-dehydratase 0.57 IKLFDK_08350 Circularly permuted type 2 ATP-grasp protein
Mucilaginibacter yixingensis YX-36 DSM 26809 0.49 ABZR88_RS17425 dTDP-glucose 4,6-dehydratase 0.52 ABZR88_RS00345 circularly permuted type 2 ATP-grasp protein
Synechocystis sp000284455 PCC 6803 0.49 SGL_RS15130 dTDP-glucose 4,6-dehydratase 0.51 SGL_RS12915 circularly permuted type 2 ATP-grasp protein low > 52
Dechlorosoma suillum PS 0.49 Dsui_1948 dTDP-glucose 4,6-dehydratase 0.60 Dsui_3236 hypothetical protein
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1837 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.56 GFF5540 Protein containing domains DUF404, DUF407
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS22050 spore coat protein 0.58 HSERO_RS03180 hypothetical protein
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_2329 dTDP-glucose 4,6-dehydratase 0.50 Echvi_3991 Uncharacterized conserved protein
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS19340 dTDP-glucose 4,6-dehydratase 0.50 CA265_RS05130 hypothetical protein
Cellulophaga baltica 18 0.42 M666_RS05585 dTDP-glucose 4,6-dehydratase 0.49 M666_RS16080 circularly permuted type 2 ATP-grasp protein
Mycobacterium tuberculosis H37Rv 0.36 Rv3464 dTDP-glucose 4,6-dehydratase RmlB 0.46 Rv2411c Conserved hypothetical protein
Rhodopseudomonas palustris CGA009 0.19 TX73_020345 GDP-mannose 4,6-dehydratase 0.61 TX73_011235 circularly permuted type 2 ATP-grasp protein low > 86

Not shown: 49 genomes with orthologs for GFF4227 only; 2 genomes with orthologs for GFF1520 only