Conservation of cofitness between EFB2_01343 and EFB2_03621 in Escherichia fergusonii Becca

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia fergusonii Becca 1.0 EFB2_01343 Nitrogen regulatory protein P-II 1 1.0 EFB2_03621 Trigger factor 0.66 10
Escherichia coli ECRC101 1.00 MCAODC_12030 glnB nitrogen regulatory protein P-II 0.99 MCAODC_27565 tig trigger factor low > 87
Escherichia coli ECRC62 1.00 BNILDI_11975 glnB nitrogen regulatory protein P-II 0.99 BNILDI_22690 tig trigger factor low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01154 Nitrogen regulatory protein P-II 1 0.99 OHPLBJKB_03237 Trigger factor low > 73
Escherichia coli ECRC102 1.00 NIAGMN_19270 glnB nitrogen regulatory protein P-II 0.99 NIAGMN_06395 tig trigger factor — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14450 nitrogen regulatory protein P-II 1.00 ECOLIN_RS02620 trigger factor — —
Escherichia coli BW25113 1.00 b2553 glnB regulatory protein P-II for glutamine synthetase (NCBI) 0.99 b0436 tig trigger factor (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_20645 glnB nitrogen regulatory protein P-II 0.99 HEPCGN_06955 tig trigger factor low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.00 GFF2454 Nitrogen regulatory protein P-II 0.96 GFF4352 Cell division trigger factor (EC 5.2.1.8) 0.81 76
Escherichia coli BL21 1.00 ECD_02445 regulatory protein P-II for glutamine synthetase 0.99 ECD_00387 peptidyl-prolyl cis/trans isomerase (trigger factor) low > 61
Escherichia coli ECOR27 1.00 NOLOHH_13175 glnB nitrogen regulatory protein P-II 0.99 NOLOHH_01275 tig trigger factor low > 75
Escherichia coli ECRC100 1.00 OKFHMN_21500 glnB nitrogen regulatory protein P-II 0.99 OKFHMN_08340 tig trigger factor low > 80
Escherichia coli ECRC99 1.00 KEDOAH_06720 glnB nitrogen regulatory protein P-II 0.99 KEDOAH_19625 tig trigger factor — —
Escherichia coli ECRC98 1.00 JDDGAC_25165 glnB nitrogen regulatory protein P-II 0.99 JDDGAC_11995 tig trigger factor low > 86
Enterobacter asburiae PDN3 0.99 EX28DRAFT_0097 nitrogen regulatory protein P-II family 0.95 EX28DRAFT_2535 trigger factor low > 76
Enterobacter sp. TBS_079 0.99 MPMX20_03422 Nitrogen regulatory protein P-II 0.94 MPMX20_01027 Trigger factor low > 85
Klebsiella michiganensis M5al 0.99 BWI76_RS21245 nitrogen regulatory protein P-II 0.96 BWI76_RS06520 trigger factor 0.27 8
Dickeya dadantii 3937 0.97 DDA3937_RS15635 nitrogen regulatory protein P-II 0.86 DDA3937_RS05635 trigger factor low > 74
Erwinia tracheiphila SCR3 0.96 LU632_RS17925 glnB nitrogen regulatory protein P-II 0.86 LU632_RS18350 tig trigger factor low > 74
Dickeya dianthicola 67-19 0.96 HGI48_RS15730 nitrogen regulatory protein P-II 0.85 HGI48_RS05680 trigger factor low > 71
Dickeya dianthicola ME23 0.96 DZA65_RS16810 nitrogen regulatory protein P-II 0.85 DZA65_RS06005 trigger factor 0.54 25
Pectobacterium carotovorum WPP14 0.95 HER17_RS05930 nitrogen regulatory protein P-II 0.86 HER17_RS15855 trigger factor low > 75
Serratia liquefaciens MT49 0.95 IAI46_19450 nitrogen regulatory protein P-II 0.88 IAI46_05005 trigger factor low > 86
Pantoea sp. MT58 0.95 IAI47_04950 nitrogen regulatory protein P-II 0.87 IAI47_14660 trigger factor 0.44 6
Rahnella sp. WP5 0.94 EX31_RS20610 nitrogen regulatory protein P-II 0.87 EX31_RS22240 trigger factor low > 89
Vibrio cholerae E7946 ATCC 55056 0.89 CSW01_11410 nitrogen regulatory protein P-II 0.71 CSW01_09620 trigger factor low > 62
Shewanella sp. ANA-3 0.85 Shewana3_3124 nitrogen regulatory protein P-II (RefSeq) 0.63 Shewana3_2662 tig trigger factor (RefSeq) low > 73
Shewanella oneidensis MR-1 0.85 SO3519 glnB-2 nitrogen regulatory protein P-II 1 (NCBI ptt file) 0.63 SO1793 tig trigger factor (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.84 Sama_0935 nitrogen regulatory protein P-II (RefSeq) 0.66 Sama_1223 tig trigger factor (RefSeq) low > 62
Shewanella loihica PV-4 0.83 Shew_1110 nitrogen regulatory protein P-II (RefSeq) 0.64 Shew_2509 tig trigger factor (RefSeq) low > 60
Hydrogenophaga sp. GW460-11-11-14-LB1 0.82 GFF4272 Nitrogen regulatory protein P-II 0.39 GFF4040 Cell division trigger factor (EC 5.2.1.8) low > 90
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS24890 P-II family nitrogen regulator 0.39 QEN71_RS21990 trigger factor low > 153
Burkholderia phytofirmans PsJN 0.82 BPHYT_RS05485 nitrogen regulatory protein P-II 1 0.39 BPHYT_RS09445 trigger factor 0.20 80
Paraburkholderia graminis OAS925 0.82 ABIE53_001346 nitrogen regulatory protein P-II 1 0.37 ABIE53_002114 trigger factor low > 113
Kangiella aquimarina DSM 16071 0.82 B158DRAFT_2530 nitrogen regulatory protein P-II family 0.46 B158DRAFT_1033 trigger factor low > 40
Paraburkholderia bryophila 376MFSha3.1 0.82 H281DRAFT_00219 nitrogen regulatory protein P-II family 0.39 H281DRAFT_00895 trigger factor low > 103
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS04300 nitrogen regulatory protein P-II 1 0.38 RR42_RS09015 trigger factor low > 128
Dechlorosoma suillum PS 0.81 Dsui_1687 nitrogen regulatory protein PII 0.37 Dsui_2195 trigger factor low > 51
Ralstonia solanacearum PSI07 0.80 RPSI07_RS13170 nitrogen regulatory protein P-II 1 0.36 RPSI07_RS16120 trigger factor — —
Variovorax sp. SCN45 0.80 GFF1151 Nitrogen regulatory protein P-II 0.38 GFF490 Cell division trigger factor (EC 5.2.1.8) low > 127
Ralstonia solanacearum GMI1000 0.80 RS_RS11770 nitrogen regulatory protein P-II 1 0.35 RS_RS08640 trigger factor low > 80
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS16080 P-II family nitrogen regulator 0.36 ABZR87_RS12800 trigger factor low > 80
Variovorax sp. OAS795 0.80 ABID97_RS14850 P-II family nitrogen regulator 0.39 ABID97_RS17605 trigger factor low > 91
Ralstonia solanacearum UW163 0.79 UW163_RS09490 nitrogen regulatory protein P-II 1 0.36 UW163_RS14665 trigger factor — —
Ralstonia solanacearum IBSBF1503 0.79 RALBFv3_RS04180 nitrogen regulatory protein P-II 1 0.36 RALBFv3_RS01355 trigger factor — —
Alteromonas macleodii MIT1002 0.79 MIT1002_02726 Nitrogen regulatory protein P-II 0.60 MIT1002_02761 Trigger factor low > 70
Rhodopseudomonas palustris CGA009 0.76 TX73_015385 P-II family nitrogen regulator 0.23 TX73_015360 trigger factor — —
Rhodospirillum rubrum S1H 0.75 Rru_A1130 Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) 0.25 Rru_A1549 Trigger factor (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.74 Ga0059261_3385 nitrogen regulatory protein P-II family 0.26 Ga0059261_0089 trigger factor — —
Brevundimonas sp. GW460-12-10-14-LB2 0.74 A4249_RS05675 P-II family nitrogen regulator 0.26 A4249_RS06500 trigger factor — —
Lysobacter sp. OAE881 0.74 ABIE51_RS00145 P-II family nitrogen regulator 0.31 ABIE51_RS14160 trigger factor low > 62
Magnetospirillum magneticum AMB-1 0.74 AMB_RS03570 P-II family nitrogen regulator 0.24 AMB_RS14050 trigger factor — —
Rhizobium sp. OAE497 0.74 ABIE40_RS09340 P-II family nitrogen regulator 0.23 ABIE40_RS08600 trigger factor — —
Xanthomonas campestris pv. campestris strain 8004 0.73 Xcc-8004.4913.1 Nitrogen regulatory protein P-II 0.29 Xcc-8004.4049.1 Cell division trigger factor (EC 5.2.1.8) low > 74
Caulobacter crescentus NA1000 0.73 CCNA_02046 nitrogen regulatory protein P-II 0.23 CCNA_02042 trigger factor chaperone — —
Bosea sp. OAE506 0.73 ABIE41_RS16890 P-II family nitrogen regulator 0.23 ABIE41_RS18065 trigger factor — —
Caulobacter crescentus NA1000 Δfur 0.73 CCNA_02046 nitrogen regulatory protein P-II 0.23 CCNA_02042 trigger factor chaperone — —
Azospirillum brasilense Sp245 0.73 AZOBR_RS07100 nitrogen regulatory protein P-II 1 0.26 AZOBR_RS07130 trigger factor — —
Agrobacterium fabrum C58 0.73 Atu1769 nitrogen regulatory protein PII 0.25 Atu1664 trigger factor — —
Sinorhizobium meliloti 1021 0.73 SMc00947 nitrogen regulatory protein PII 0.25 SMc02050 trigger factor — —
Azospirillum sp. SherDot2 0.73 MPMX19_01554 Nitrogen regulatory protein P-II 0.27 MPMX19_01549 Trigger factor — —
Castellaniella sp019104865 MT123 0.72 ABCV34_RS03065 P-II family nitrogen regulator 0.36 ABCV34_RS05140 trigger factor — —
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS09460 nitrogen regulatory protein P-II 1 0.39 HSERO_RS12920 trigger factor — —
Phaeobacter inhibens DSM 17395 0.69 PGA1_c29400 nitrogen regulatory protein P-II 0.23 PGA1_c18160 trigger factor Tig low > 62
Dinoroseobacter shibae DFL-12 0.69 Dshi_1838 nitrogen regulatory protein P-II (RefSeq) 0.24 Dshi_2190 trigger factor (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.66 DVU1232 glnB-1 nitrogen regulatory protein P-II (TIGR) 0.17 DVU1334 tig trigger factor (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.66 DvMF_0865 nitrogen regulatory protein P-II (RefSeq) 0.16 DvMF_0109 trigger factor (RefSeq) — —
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS14280 P-II family nitrogen regulator 0.07 ABI39_RS02335 trigger factor low > 72
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS06900 P-II family nitrogen regulator 0.06 HMPREF1058_RS03090 trigger factor low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_21345 transcriptional regulator 0.07 CA264_01415 trigger factor low > 74

Not shown: 9 genomes with orthologs for EFB2_01343 only; 24 genomes with orthologs for EFB2_03621 only