Conservation of cofitness between ECD_00149 and ECD_04089 in Escherichia coli BL21

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00149 ferrichrome outer membrane transporter 1.0 ECD_04089 UPF0053 family inner membrane protein low > 61
Escherichia coli ECOR27 1.00 NOLOHH_02665 fhuA ferrichrome porin FhuA 1.00 NOLOHH_04280 paeA Polyamine export protein low > 75
Escherichia coli ECRC62 1.00 BNILDI_09005 fhuA ferrichrome porin FhuA 1.00 BNILDI_07240 tlyC Polyamine export protein low > 75
Escherichia coli BW25113 1.00 b0150 fhuA ferrichrome outer membrane transporter (NCBI) 1.00 b4218 ytfL predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_13915 fhuA ferrichrome porin FhuA 1.00 JDDGAC_15655 paeA Polyamine export protein low > 86
Escherichia coli ECRC100 1.00 OKFHMN_10320 fhuA ferrichrome porin FhuA 1.00 OKFHMN_12015 paeA Polyamine export protein low > 80
Escherichia coli ECRC101 1.00 MCAODC_00835 fhuA ferrichrome porin FhuA 1.00 MCAODC_02530 paeA Polyamine export protein low > 87
Escherichia coli ECRC99 1.00 KEDOAH_17835 fhuA ferrichrome porin FhuA 1.00 KEDOAH_16140 paeA Polyamine export protein — —
Escherichia coli ECRC102 1.00 NIAGMN_08170 fhuA ferrichrome porin FhuA 1.00 NIAGMN_09865 paeA Polyamine export protein — —
Escherichia coli ECOR38 0.90 HEPCGN_08270 fhuA ferrichrome porin FhuA 1.00 HEPCGN_10215 paeA Polyamine export protein low > 87
Escherichia coli Nissle 1917 0.90 ECOLIN_RS00840 ferrichrome porin FhuA 1.00 ECOLIN_RS24495 hemolysin family protein low > 55
Escherichia fergusonii Becca 0.89 EFB2_03894 Ferrichrome outer membrane transporter/phage receptor 1.00 EFB2_04311 hypothetical protein low > 86
Enterobacter asburiae PDN3 0.89 EX28DRAFT_3739 TonB-dependent siderophore receptor 0.94 EX28DRAFT_3404 Hemolysins and related proteins containing CBS domains low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_03512 Ferrichrome outer membrane transporter/phage receptor 1.00 OHPLBJKB_03816 hypothetical protein low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF81 Ferric hydroxamate outer membrane receptor FhuA 0.93 GFF871 Putative membrane protein low > 78
Klebsiella michiganensis M5al 0.62 BWI76_RS05125 ferrichrome porin FhuA 0.92 BWI76_RS02765 membrane protein 0.29 52
Rahnella sp. WP5 0.56 EX31_RS03225 ferrichrome porin FhuA 0.80 EX31_RS08705 HlyC/CorC family transporter low > 89
Enterobacter sp. TBS_079 0.56 MPMX20_00836 Ferrichrome outer membrane transporter/phage receptor 0.93 MPMX20_00495 hypothetical protein low > 85
Serratia liquefaciens MT49 0.55 IAI46_21185 ferrichrome porin FhuA 0.82 IAI46_01760 HlyC/CorC family transporter low > 86
Pantoea sp. MT58 0.53 IAI47_15610 ferrichrome porin FhuA 0.83 IAI47_02710 HlyC/CorC family transporter low > 76
Azospirillum sp. SherDot2 0.33 MPMX19_05479 Ferrichrome outer membrane transporter/phage receptor 0.27 MPMX19_04101 hypothetical protein low > 112
Dickeya dadantii 3937 0.33 DDA3937_RS14700 TonB-dependent siderophore receptor 0.77 DDA3937_RS17170 HlyC/CorC family transporter low > 74
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS12840 TonB-dependent siderophore receptor 0.46 ABZR87_RS15885 hemolysin family protein low > 80
Pseudomonas fluorescens SBW25 0.33 PFLU_RS12695 TonB-dependent siderophore receptor 0.10 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS12695 TonB-dependent siderophore receptor 0.10 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas simiae WCS417 0.33 PS417_11955 ligand-gated channel 0.10 PS417_28050 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1813 Ferrichrome-iron receptor 0.11 Pf1N1B4_2042 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas sp. RS175 0.32 PFR28_04773 Ferrichrome outer membrane transporter/phage receptor 0.11 PFR28_04481 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_3994 Ferrichrome-iron receptor 0.11 Pf6N2E2_4068 Phosphate regulon metal ion transporter containing CBS domains low > 103
Dickeya dianthicola ME23 0.32 DZA65_RS15585 TonB-dependent siderophore receptor 0.77 DZA65_RS18310 HlyC/CorC family transporter low > 75
Dickeya dianthicola 67-19 0.32 HGI48_RS14640 TonB-dependent siderophore receptor 0.77 HGI48_RS17225 HlyC/CorC family transporter low > 71
Azospirillum brasilense Sp245 0.31 AZOBR_RS26605 TonB-denpendent receptor 0.29 AZOBR_RS16970 hypothetical protein low > 97
Pseudomonas putida KT2440 0.31 PP_0160 putative ferrioxamine receptor 0.11 PP_5322 putative metal ion transporter low > 96
Lysobacter sp. OAE881 0.31 ABIE51_RS00595 TonB-dependent siderophore receptor 0.21 ABIE51_RS06575 hemolysin family protein low > 62
Pectobacterium carotovorum WPP14 0.30 HER17_RS02320 TonB-dependent siderophore receptor 0.77 HER17_RS03970 hemolysin family protein low > 75
Agrobacterium fabrum C58 0.30 Atu5311 TonB-dependent receptor 0.21 Atu3732 hemolysin — —
Rhodopseudomonas palustris CGA009 0.30 TX73_017655 TonB-dependent siderophore receptor 0.22 TX73_014560 hemolysin family protein low > 86
Variovorax sp. OAS795 0.30 ABID97_RS21465 TonB-dependent siderophore receptor 0.55 ABID97_RS07170 hemolysin family protein low > 91
Rhodanobacter denitrificans MT42 0.29 LRK55_RS02500 TonB-dependent siderophore receptor 0.21 LRK55_RS12675 hemolysin family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS02745 TonB-dependent siderophore receptor 0.21 LRK54_RS12975 hemolysin family protein low > 59
Ralstonia solanacearum UW163 0.29 UW163_RS06950 TonB-dependent siderophore receptor 0.44 UW163_RS09720 HlyC/CorC family transporter — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS06675 TonB-dependent siderophore receptor 0.44 RALBFv3_RS03950 HlyC/CorC family transporter low > 76
Variovorax sp. SCN45 0.28 GFF2438 Ferrichrome-iron receptor 0.54 GFF2520 UPF0053 inner membrane protein YtfL low > 127
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1133 Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent 0.11 PfGW456L13_760 Phosphate regulon metal ion transporter containing CBS domains low > 87
Ralstonia solanacearum GMI1000 0.28 RS_RS14625 TonB-dependent siderophore receptor 0.45 RS_RS11430 HlyC/CorC family transporter 0.33 73
Ralstonia solanacearum PSI07 0.27 RPSI07_RS10550 TonB-dependent siderophore receptor 0.45 RPSI07_RS13270 HlyC/CorC family transporter low > 81
Rhizobium sp. OAE497 0.26 ABIE40_RS21735 TonB-dependent siderophore receptor 0.22 ABIE40_RS21835 hemolysin family protein low > 107
Rhodospirillum rubrum S1H 0.26 Rru_A2395 TonB-dependent siderophore receptor (NCBI) 0.26 Rru_A0756 hypothetical protein (NCBI) low > 58
Sinorhizobium meliloti 1021 0.26 SMc01657 ferrioxamine B receptor precursor protein 0.26 SMc00240 hypothetical protein low > 103
Dechlorosoma suillum PS 0.25 Dsui_2950 TonB-dependent siderophore receptor 0.29 Dsui_3105 CBS domain-containing protein low > 51
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS22550 ligand-gated channel protein 0.51 HSERO_RS08405 membrane protein low > 78
Acidovorax sp. GW101-3H11 0.24 Ac3H11_250 Ferrichrome-iron receptor 0.54 Ac3H11_4775 Putative membrane protein low > 79
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_3607 TonB-dependent siderophore receptor 0.26 Ga0059261_1443 Hemolysins and related proteins containing CBS domains low > 68
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_01065 TonB-dependent siderophore receptor 0.57 CSW01_18340 HlyC/CorC family transporter low > 62
Shewanella amazonensis SB2B 0.20 Sama_2875 outer membrane protein (RefSeq) 0.55 Sama_3284 hemolysin, putative (RefSeq) low > 62
Bosea sp. OAE506 0.19 ABIE41_RS03600 TonB-dependent siderophore receptor 0.20 ABIE41_RS13905 hemolysin family protein low > 77
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_3124 TonB-dependent siderophore receptor 0.12 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_3124 TonB-dependent siderophore receptor 0.12 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS31760 IclR family transcriptional regulator 0.44 RR42_RS04375 magnesium transporter low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF5752 Ferrichrome-iron receptor 0.27 GFF224 Magnesium and cobalt efflux protein CorC low > 90
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_05095 TonB-dependent receptor 0.11 AO353_09865 hypothetical protein low > 101
Xanthomonas campestris pv. campestris strain 8004 0.13 Xcc-8004.5299.1 Ferrichrome-iron receptor 0.21 Xcc-8004.3156.1 Magnesium and cobalt efflux protein CorC low > 74
Acinetobacter radioresistens SK82 0.13 MPMX26_01925 Metal-pseudopaline receptor CntO 0.55 MPMX26_02321 hypothetical protein — —
Shewanella sp. ANA-3 0.12 Shewana3_0983 TonB-dependent siderophore receptor (RefSeq) 0.59 Shewana3_0353 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.11 SO1156 TonB-dependent receptor (NCBI ptt file) 0.59 SO4351 CBS domain protein (NCBI ptt file) low > 76
Pedobacter sp. GW460-11-11-14-LB5 0.11 CA265_RS18590 TonB-dependent siderophore receptor 0.17 CA265_RS23615 hemolysin low > 88
Caulobacter crescentus NA1000 Δfur 0.11 CCNA_01856 ferrichrome-iron receptor 0.23 CCNA_00369 magnesium and cobalt efflux protein corC-like protein low > 67
Caulobacter crescentus NA1000 0.11 CCNA_01856 ferrichrome-iron receptor 0.23 CCNA_00369 magnesium and cobalt efflux protein corC-like protein low > 66
Shewanella loihica PV-4 0.10 Shew_3841 TonB-dependent siderophore receptor (RefSeq) 0.58 Shew_0284 hypothetical protein (RefSeq) low > 60
Mucilaginibacter yixingensis YX-36 DSM 26809 0.09 ABZR88_RS05795 TonB-dependent receptor 0.18 ABZR88_RS17090 hemolysin family protein low > 71
Erwinia tracheiphila SCR3 0.06 LU632_RS10235 TonB-dependent siderophore receptor 0.81 LU632_RS02100 hemolysin family protein low > 74

Not shown: 12 genomes with orthologs for ECD_00149 only; 16 genomes with orthologs for ECD_04089 only