| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_04103 | | putative antibiotic peptide MccB17 maturation peptidase | 1.0 | ECD_03347 | | oligopeptidase A | 0.52 | 32 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_11925 | pmbA | metalloprotease PmbA | 1.00 | OKFHMN_16415 | prlC | oligopeptidase A | low | > 80 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_02430 | pmbA | metalloprotease PmbA | 1.00 | MCAODC_06930 | prlC | oligopeptidase A | low | > 87 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_07325 | pmbA | metalloprotease PmbA | 1.00 | BNILDI_03210 | prlC | oligopeptidase A | low | > 75 |
| Escherichia coli BW25113 | 1.00 | b4235 | pmbA | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) | 1.00 | b3498 | prlC | oligopeptidase A (NCBI) | 0.55 | 2 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_10125 | pmbA | metalloprotease PmbA | 1.00 | HEPCGN_15325 | prlC | oligopeptidase A | low | > 87 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_09775 | pmbA | metalloprotease PmbA | 1.00 | NIAGMN_14180 | prlC | oligopeptidase A | — | — |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_04185 | pmbA | metalloprotease PmbA | 1.00 | NOLOHH_08350 | prlC | oligopeptidase A | 0.68 | 10 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_15565 | pmbA | metalloprotease PmbA | 1.00 | JDDGAC_20045 | prlC | oligopeptidase A | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03800 | | Metalloprotease PmbA | 1.00 | OHPLBJKB_00205 | | Oligopeptidase A | low | > 73 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_16230 | pmbA | metalloprotease PmbA | 1.00 | KEDOAH_11730 | prlC | oligopeptidase A | — | — |
| Escherichia fergusonii Becca | 0.99 | EFB2_04298 | | Metalloprotease PmbA | 1.00 | EFB2_00317 | | Oligopeptidase A | low | > 86 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS24570 | | metalloprotease PmbA | 0.99 | ECOLIN_RS19985 | | oligopeptidase A | low | > 55 |
| Enterobacter sp. TBS_079 | 0.96 | MPMX20_00517 | | Metalloprotease PmbA | 0.93 | MPMX20_04397 | | Oligopeptidase A | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.96 | GFF904 | | TldE protein, part of TldE/TldD proteolytic complex | 0.94 | GFF517 | | Oligopeptidase A (EC 3.4.24.70) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.96 | EX28DRAFT_3422 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.94 | EX28DRAFT_4063 | | Zn-dependent oligopeptidases | low | > 76 |
| Klebsiella michiganensis M5al | 0.94 | BWI76_RS02850 | | metalloprotease PmbA | 0.92 | BWI76_RS26610 | | oligopeptidase A | low | > 92 |
| Serratia liquefaciens MT49 | 0.86 | IAI46_22575 | | metalloprotease PmbA | 0.83 | IAI46_24210 | | oligopeptidase A | low | > 86 |
| Rahnella sp. WP5 | 0.85 | EX31_RS12320 | | metalloprotease PmbA | 0.82 | EX31_RS05165 | | oligopeptidase A | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.84 | HER17_RS20090 | | metalloprotease PmbA | 0.85 | HER17_RS21300 | | oligopeptidase A | low | > 75 |
| Pantoea sp. MT58 | 0.84 | IAI47_02765 | | metalloprotease PmbA | 0.86 | IAI47_01345 | | oligopeptidase A | 0.39 | 46 |
| Dickeya dadantii 3937 | 0.81 | DDA3937_RS01500 | | metalloprotease PmbA | 0.83 | DDA3937_RS21265 | | oligopeptidase A | low | > 74 |
| Erwinia tracheiphila SCR3 | 0.81 | LU632_RS02145 | pmbA | metalloprotease PmbA | 0.85 | LU632_RS19470 | prlC | oligopeptidase A | 0.69 | 27 |
| Dickeya dianthicola ME23 | 0.81 | DZA65_RS01480 | | metalloprotease PmbA | 0.83 | DZA65_RS00035 | | oligopeptidase A | low | > 75 |
| Dickeya dianthicola 67-19 | 0.81 | HGI48_RS01415 | | metalloprotease PmbA | 0.82 | HGI48_RS00045 | | oligopeptidase A | low | > 71 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_12845 | | metalloprotease PmbA | 0.73 | CSW01_01010 | | oligopeptidase A | low | > 62 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_3631 | | microcin-processing peptidase 1 (RefSeq) | 0.65 | Shewana3_4051 | | oligopeptidase A (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.59 | Sama_0482 | | PmbA protein (RefSeq) | 0.64 | Sama_3546 | | oligopeptidase A (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.59 | SO4078 | pmbA | pmba protein (NCBI ptt file) | 0.65 | SO4699 | prlC | oligopeptidase A (NCBI ptt file) | 0.28 | 40 |
| Shewanella loihica PV-4 | 0.57 | Shew_0416 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.66 | Shew_3657 | | oligopeptidase A (RefSeq) | 0.72 | 1 |
| Alteromonas macleodii MIT1002 | 0.54 | MIT1002_00230 | | peptidase PmbA | 0.64 | MIT1002_03633 | | Oligopeptidase A | low | > 70 |
| Pseudomonas sp. RS175 | 0.48 | PFR28_00163 | | Metalloprotease PmbA | 0.57 | PFR28_04699 | | Oligopeptidase A | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.48 | PFLU_RS04350 | | metalloprotease PmbA | 0.56 | PFLU_RS00240 | | oligopeptidase A | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_3278 | | TldE protein, part of TldE/TldD proteolytic complex | 0.57 | Pf6N2E2_4091 | | Oligopeptidase A (EC 3.4.24.70) | 0.26 | 77 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_07085 | | peptidase PmbA | 0.57 | AO356_11120 | | oligopeptidase A | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.48 | PFLU_RS04350 | | metalloprotease PmbA | 0.56 | PFLU_RS00240 | | oligopeptidase A | 0.28 | 102 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_04295 | | peptidase PmbA | 0.57 | PS417_00245 | | oligopeptidase A | 0.49 | 18 |
| Pseudomonas putida KT2440 | 0.47 | PP_0942 | | regulatory protease | 0.57 | PP_0096 | | oligopeptidase A | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_1090 | | TldE protein, part of TldE/TldD proteolytic complex | 0.56 | Pf1N1B4_1844 | | Oligopeptidase A (EC 3.4.24.70) | 0.42 | 1 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_05205 | | peptidase PmbA | 0.56 | AO353_10775 | | oligopeptidase A | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_5024 | | TldE protein, part of TldE/TldD proteolytic complex | 0.56 | PfGW456L13_624 | | Oligopeptidase A (EC 3.4.24.70) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.58 | Psyr_0045 | | oligopeptidase A, Metallo peptidase, MEROPS family M03A | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.58 | Psyr_0045 | | oligopeptidase A, Metallo peptidase, MEROPS family M03A | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_3318 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.57 | Psest_4320 | | Zn-dependent oligopeptidases | low | > 67 |
| Herbaspirillum seropedicae SmR1 | 0.45 | HSERO_RS09265 | | peptidase C69 | 0.48 | HSERO_RS07290 | | oligopeptidase A | 0.45 | 3 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.45 | Xcc-8004.1885.1 | | TldE protein, part of TldE/TldD proteolytic complex | 0.46 | Xcc-8004.4539.1 | | Oligopeptidase A (EC 3.4.24.70) | low | > 74 |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS20695 | | metalloprotease PmbA | 0.45 | ABID97_RS14080 | | M3 family metallopeptidase | 0.86 | 2 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS21700 | | metalloprotease PmbA | 0.49 | ABZR86_RS14940 | | M3 family metallopeptidase | 0.62 | 13 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_08570 | | TldE protein, part of TldE/TldD proteolytic complex | 0.56 | OH686_12360 | | Oligopeptidase A | low | > 80 |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_10260 | pmbA | metalloprotease PmbA | 0.49 | OKGIIK_15380 | dcp | oligopeptidase A | low | > 52 |
| Variovorax sp. SCN45 | 0.45 | GFF4697 | | TldE protein, part of TldE/TldD proteolytic complex | 0.44 | GFF963 | | Oligopeptidase A (EC 3.4.24.70) | low | > 127 |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS03125 | | metalloprotease PmbA | 0.48 | LRK55_RS08380 | | M3 family metallopeptidase | 0.71 | 46 |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS03375 | | metalloprotease PmbA | 0.48 | LRK54_RS08615 | | M3 family metallopeptidase | 0.85 | 4 |
| Dechlorosoma suillum PS | 0.44 | Dsui_1234 | | putative Zn-dependent protease-like protein | 0.49 | Dsui_0046 | | Zn-dependent oligopeptidase | 0.63 | 19 |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_3262 | | TldE protein, part of TldE/TldD proteolytic complex | 0.43 | Ac3H11_4097 | | Oligopeptidase A (EC 3.4.24.70) | 0.29 | 31 |
| Ralstonia solanacearum IBSBF1503 | 0.43 | RALBFv3_RS13965 | | metalloprotease PmbA | 0.47 | RALBFv3_RS01690 | | oligopeptidase A | low | > 76 |
| Ralstonia solanacearum UW163 | 0.43 | UW163_RS15845 | | metalloprotease PmbA | 0.47 | UW163_RS15000 | | oligopeptidase A | — | — |
| Ralstonia sp. UNC404CL21Col | 0.43 | ABZR87_RS09660 | | metalloprotease PmbA | 0.46 | ABZR87_RS13490 | | M3 family metallopeptidase | 0.40 | 30 |
| Paraburkholderia graminis OAS925 | 0.43 | ABIE53_003116 | | PmbA protein | 0.48 | ABIE53_002798 | | oligopeptidase A | 0.59 | 2 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.43 | H281DRAFT_04304 | | microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 | 0.47 | H281DRAFT_00461 | | oligopeptidase A Metallo peptidase. MEROPS family M03A | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.43 | RPSI07_RS19505 | | metalloprotease PmbA | 0.46 | RPSI07_RS15795 | | oligopeptidase A | 0.41 | 52 |
| Kangiella aquimarina DSM 16071 | 0.43 | B158DRAFT_2075 | | microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 | 0.60 | B158DRAFT_0457 | | Zn-dependent oligopeptidases | low | > 40 |
| Burkholderia phytofirmans PsJN | 0.43 | BPHYT_RS14705 | | peptidase C69 | 0.48 | BPHYT_RS12875 | | oligopeptidase A | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.43 | QEN71_RS04270 | | metalloprotease PmbA | 0.48 | QEN71_RS05695 | | M3 family metallopeptidase | 0.82 | 19 |
| Castellaniella sp019104865 MT123 | 0.42 | ABCV34_RS10610 | | metalloprotease PmbA | 0.43 | ABCV34_RS04180 | | M3 family metallopeptidase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF3655 | | TldE protein, part of TldE/TldD proteolytic complex | 0.44 | GFF4214 | | Oligopeptidase A (EC 3.4.24.70) | low | > 90 |
| Ralstonia solanacearum GMI1000 | 0.41 | RS_RS04700 | | metalloprotease PmbA | 0.47 | RS_RS08035 | | oligopeptidase A | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.41 | RR42_RS14750 | | peptidase PMbA | 0.46 | RR42_RS07340 | | oligopeptidase A | low | > 128 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.20 | BT3649 | | putative modulator of DNA gyrase (NCBI ptt file) | 0.33 | BT4262 | | peptidyl-dipeptidase (NCBI ptt file) | low | > 81 |
| Bacteroides stercoris CC31F | 0.17 | HMPREF1181_RS03170 | | TldD/PmbA family protein | 0.34 | HMPREF1181_RS06150 | | M3 family metallopeptidase | low | > 56 |
Not shown: 19 genomes with orthologs for ECD_04103 only; 3 genomes with orthologs for ECD_03347 only