Conservation of cofitness between ECD_02179 and ECD_02180 in Escherichia coli BL21

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02179 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 1.0 ECD_02180 undecaprenyl phosphate-L-Ara4FN transferase 0.98 1
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1.00 OHPLBJKB_01457 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 73
Escherichia coli ECRC62 1.00 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 BNILDI_13530 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 75
Escherichia coli ECOR27 0.99 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 NOLOHH_14615 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 75
Escherichia coli ECOR38 0.99 HEPCGN_22210 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.99 HEPCGN_22205 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 87
Escherichia coli BW25113 0.99 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) 1.00 b2254 yfbF undecaprenyl phosphate-L-Ara4FN transferase (NCBI) low > 76
Escherichia coli Nissle 1917 0.97 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.99 ECOLIN_RS13130 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Escherichia coli ECRC98 0.95 JDDGAC_26960 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 JDDGAC_26955 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 86
Escherichia coli ECRC102 0.95 NIAGMN_20765 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 NIAGMN_20760 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Escherichia coli ECRC99 0.95 KEDOAH_05200 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 KEDOAH_05205 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Escherichia coli ECRC100 0.95 OKFHMN_22995 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 OKFHMN_22990 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 80
Escherichia coli ECRC101 0.95 MCAODC_14035 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 MCAODC_14030 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.52 23
Escherichia fergusonii Becca 0.95 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.99 EFB2_01602 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 0.88 GFF1859 Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-) low > 78
Enterobacter sp. TBS_079 0.81 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.84 MPMX20_04379 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.85 EX28DRAFT_4083 Glycosyltransferases involved in cell wall biogenesis 0.52 28
Klebsiella michiganensis M5al 0.79 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.87 BWI76_RS26480 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.62 2
Erwinia tracheiphila SCR3 0.78 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.81 LU632_RS16490 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.85 2
Dickeya dadantii 3937 0.78 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.80 DDA3937_RS21385 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.48 74
Dickeya dianthicola ME23 0.77 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.78 DZA65_RS22615 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.79 HGI48_RS21630 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.70 8
Pectobacterium carotovorum WPP14 0.72 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.68 HER17_RS06525 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 75
Serratia liquefaciens MT49 0.71 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.78 IAI46_11020 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 86
Pantoea sp. MT58 0.71 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.76 IAI47_21620 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.47 4
Rahnella sp. WP5 0.70 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.77 EX31_RS14015 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.88 1
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase 0.68 AO353_25535 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.67 Psyr_2690 Glycosyl transferase, family 2 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.67 Psyr_2690 Glycosyl transferase, family 2 low > 86
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS15735 pyridoxal phosphate-dependent aminotransferase 0.45 RR42_RS30910 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_10755 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.24 OKGIIK_01345 Glycosyl transferase family 2 low > 52
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.47 H281DRAFT_00804 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Paraburkholderia graminis OAS925 0.32 ABIE53_002021 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.47 ABIE53_002020 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS22430 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.47 QEN71_RS22435 glycosyltransferase
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS08930 aminotransferase DegT 0.48 BPHYT_RS08925 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Ralstonia solanacearum PSI07 0.32 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.49 RPSI07_RS17520 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS10435 aminotransferase DegT 0.46 HSERO_RS10430 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Rhodospirillum rubrum S1H 0.31 Rru_A2746 DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) 0.27 Rru_A1005 Glycosyl transferase, family 2 (NCBI)
Pseudomonas simiae WCS417 0.31 PS417_27245 aminotransferase DegT 0.68 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.47 5
Pseudomonas fluorescens SBW25 0.31 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.68 PFLU_RS14830 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.81 16
Ralstonia solanacearum UW163 0.31 UW163_RS13295 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.49 UW163_RS13290 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.68 PFLU_RS14830 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 109
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS15850 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.49 RALBFv3_RS15845 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Ralstonia solanacearum GMI1000 0.30 RS_RS06630 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.49 RS_RS06625 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_00234 WecE-family cell wall biogenesis enzyme 0.24 CCNA_02983 polyprenyl-phosphate beta-D-glucosyltransferase low > 67
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS11420 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.48 ABZR87_RS11415 glycosyltransferase
Caulobacter crescentus NA1000 0.30 CCNA_00234 WecE-family cell wall biogenesis enzyme 0.24 CCNA_02983 polyprenyl-phosphate beta-D-glucosyltransferase low > 66
Magnetospirillum magneticum AMB-1 0.30 AMB_RS00560 DegT/DnrJ/EryC1/StrS family aminotransferase 0.25 AMB_RS01160 glycosyltransferase
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase 0.24 Pf1N1B4_798 Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-) low > 87
Marinobacter adhaerens HP15 0.28 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family 0.27 HP15_3970 glycosyl transferase, group 2 family protein
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.23 Pf6N2E2_2738 Glycosyltransferase low > 103
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_4370 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.26 PfGW456L13_4787 Bactoprenol glucosyl transferase GtrB (EC 2.4.1.-) low > 87
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_07955 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.24 CA264_01495 glycosyltransferase
Alteromonas macleodii MIT1002 0.25 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.25 MIT1002_01632 hypothetical protein low > 70
Desulfovibrio vulgaris Miyazaki F 0.25 DvMF_1911 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) 0.24 DvMF_1923 glycosyl transferase family 2 (RefSeq) low > 51
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_03400 aminotransferase DegT 0.23 AO356_04470 bactoprenol glucosyl transferase low > 104
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS01760 aminotransferase DegT 0.22 CA265_RS03725 glycosyltransferase
Phaeobacter inhibens DSM 17395 0.23 PGA1_c05070 putative pyridoxal-phosphate-dependent aminotransferase 0.24 PGA1_c27850 glycosyltransferase low > 62
Bacteroides thetaiotaomicron VPI-5482 0.23 BT0612 putative aminotransferase (NCBI ptt file) 0.26 BT3379 putative glycosyltransferase (NCBI ptt file) low > 81
Mucilaginibacter yixingensis YX-36 DSM 26809 0.23 ABZR88_RS08945 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.24 ABZR88_RS10610 glycosyltransferase family 2 protein
Variovorax sp. SCN45 0.22 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.25 GFF6747 Glycosyl transferase, family 2 low > 127
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.23 Ga0059261_1298 Glycosyltransferases involved in cell wall biogenesis
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.4490.1 Lipopolysaccharide biosynthesis protein RffA 0.24 Xcc-8004.1586.1 Glycosyltransferase low > 74
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS18520 DegT/DnrJ/EryC1/StrS family aminotransferase 0.24 ABZR86_RS18915 glycosyltransferase family 2 protein low > 74
Rhodopseudomonas palustris CGA009 0.20 TX73_020615 DegT/DnrJ/EryC1/StrS family aminotransferase 0.20 TX73_005895 glycosyltransferase family 2 protein
Rhodanobacter denitrificans FW104-10B01 0.20 LRK54_RS05160 DegT/DnrJ/EryC1/StrS family aminotransferase 0.22 LRK54_RS09030 glycosyltransferase family 2 protein low > 59
Rhodanobacter denitrificans MT42 0.20 LRK55_RS04940 DegT/DnrJ/EryC1/StrS family aminotransferase 0.22 LRK55_RS19125 glycosyltransferase family 2 protein low > 63
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS13755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.25 ABI39_RS13200 glycosyltransferase family 2 protein
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_3862 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.27 Echvi_0903 Glycosyltransferases involved in cell wall biogenesis low > 79
Sinorhizobium meliloti 1021 0.18 SM_b21248 aminotransferase 0.24 SMc02384 glycosyltransferase transmembrane protein low > 103
Bacteroides ovatus ATCC 8483 0.17 BACOVA_03734 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.25 BACOVA_05364 glycosyltransferase, group 2 family protein
Bacteroides stercoris CC31F 0.16 HMPREF1181_RS14960 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.26 HMPREF1181_RS08630 glycosyltransferase family 2 protein low > 56

Not shown: 16 genomes with orthologs for ECD_02179 only; 9 genomes with orthologs for ECD_02180 only