Conservation of cofitness between Dsui_0311 and Dsui_2149 in Dechlorosoma suillum PS

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_0311 ATP-dependent DNA helicase RecG 1.0 Dsui_2149 DNA helicase, Rad3 0.66 17
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS05675 DNA helicase RecG 0.56 RALBFv3_RS01530 ATP-dependent DNA helicase low > 76
Ralstonia solanacearum UW163 0.59 UW163_RS07950 DNA helicase RecG 0.56 UW163_RS14840 ATP-dependent DNA helicase — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS17390 ATP-dependent DNA helicase RecG 0.58 RR42_RS07580 helicase 0.30 122
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.56 ABZR87_RS13325 ATP-dependent DNA helicase low > 80
Ralstonia solanacearum GMI1000 0.58 RS_RS13565 DNA helicase RecG 0.56 RS_RS08195 ATP-dependent DNA helicase — —
Ralstonia solanacearum PSI07 0.58 RPSI07_RS11625 DNA helicase RecG 0.56 RPSI07_RS15960 ATP-dependent DNA helicase — —
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.56 BPHYT_RS12495 helicase low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.55 QEN71_RS06060 ATP-dependent DNA helicase — —
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.58 HSERO_RS14855 helicase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.56 H281DRAFT_00533 ATP-dependent DNA helicase DinG low > 103
Paraburkholderia graminis OAS925 0.56 ABIE53_000833 ATP-dependent DNA helicase RecG 0.55 ABIE53_002724 ATP-dependent DNA helicase DinG low > 113
Acidovorax sp. GW101-3H11 0.51 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.36 Ac3H11_2460 DinG family ATP-dependent helicase YoaA low > 79
Variovorax sp. OAS795 0.50 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.36 ABID97_RS14180 ATP-dependent DNA helicase low > 91
Castellaniella sp019104865 MT123 0.49 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.46 ABCV34_RS01875 ATP-dependent DNA helicase low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.32 GFF4872 DinG family ATP-dependent helicase YoaA low > 90
Variovorax sp. SCN45 0.48 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.36 GFF986 DinG family ATP-dependent helicase YoaA low > 127
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.15 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 — —
Pseudomonas stutzeri RCH2 0.46 Psest_4192 ATP-dependent DNA helicase RecG 0.15 Psest_2857 Rad3-related DNA helicases — —
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.15 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 low > 87
Pseudomonas fluorescens SBW25 0.45 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG low > 109
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG low > 109
Lysobacter sp. OAE881 0.45 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.36 ABIE51_RS05195 ATP-dependent DNA helicase low > 62
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_09320 ATP-dependent DNA helicase RecG 0.15 AO353_17020 ATP-dependent DNA helicase DinG 0.38 43
Pseudomonas simiae WCS417 0.45 PS417_27870 ATP-dependent DNA helicase RecG 0.15 PS417_06510 ATP-dependent DNA helicase DinG low > 88
Pseudomonas sp. S08-1 0.45 OH686_13505 ATP-dependent DNA helicase RecG 0.16 OH686_04830 ATP-dependent helicase DinG/Rad3 low > 80
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_12380 ATP-dependent DNA helicase RecG 0.15 AO356_05425 ATP-dependent DNA helicase DinG 0.35 42
Pseudomonas sp. RS175 0.45 PFR28_04435 ATP-dependent DNA helicase RecG 0.15 PFR28_00520 ATP-dependent DNA helicase DinG low > 88
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.15 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 low > 103
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.42 ABZR86_RS19750 ATP-dependent DNA helicase low > 74
Shewanella loihica PV-4 0.44 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.34 Shew_2196 helicase c2 (RefSeq) low > 60
Shewanella sp. ANA-3 0.44 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.33 Shewana3_1859 helicase c2 (RefSeq) low > 73
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.42 LRK54_RS12765 ATP-dependent DNA helicase low > 59
Rhodanobacter denitrificans MT42 0.44 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.42 LRK55_RS12465 ATP-dependent DNA helicase low > 63
Alteromonas macleodii MIT1002 0.43 MIT1002_00111 ATP-dependent DNA helicase RecG 0.39 MIT1002_02593 putative ATP-dependent helicase DinG low > 70
Shewanella oneidensis MR-1 0.43 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.34 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) low > 76
Escherichia coli ECRC101 0.43 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 0.41 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli ECRC98 0.43 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 0.41 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli ECRC102 0.43 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 0.41 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli ECRC99 0.43 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 0.41 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli ECRC101 0.43 MCAODC_06055 recG ATP-dependent DNA helicase RecG 0.41 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA — —
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.42 OKGIIK_02195 dinG helicase low > 52
Rahnella sp. WP5 0.43 EX31_RS15820 ATP-dependent DNA helicase RecG 0.39 EX31_RS10615 ATP-dependent DNA helicase low > 89
Pantoea sp. MT58 0.43 IAI47_00500 ATP-dependent DNA helicase RecG 0.40 IAI47_08820 ATP-dependent DNA helicase low > 76
Escherichia coli ECOR38 0.43 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.41 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA low > 85
Shewanella amazonensis SB2B 0.43 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.34 Sama_1940 ATP-dependent helicase DinG (RefSeq) low > 62
Escherichia fergusonii Becca 0.43 EFB2_00136 ATP-dependent DNA helicase RecG 0.41 EFB2_02192 putative ATP-dependent DNA helicase YoaA low > 86
Escherichia coli Nissle 1917 0.43 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.41 ECOLIN_RS10055 ATP-dependent DNA helicase — —
Escherichia coli ECRC62 0.43 BNILDI_04090 recG ATP-dependent DNA helicase RecG 0.41 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 0.41 OHPLBJKB_01925 putative ATP-dependent helicase DinG low > 73
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.42 B158DRAFT_2492 Rad3-related DNA helicases 0.64 17
Escherichia coli ECOR27 0.42 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 0.41 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA low > 57
Escherichia coli BL21 0.42 ECD_03509 ATP-dependent DNA helicase 0.41 ECD_01778 putative ATP-dependent helicase, DinG family — —
Escherichia coli BW25113 0.42 b3652 recG ATP-dependent DNA helicase (NCBI) 0.40 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) low > 76
Dickeya dianthicola ME23 0.42 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.40 DZA65_RS11620 ATP-dependent DNA helicase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.40 GFF2823 DinG family ATP-dependent helicase YoaA low > 78
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.37 Xcc-8004.1496.1 DinG family ATP-dependent helicase YoaA low > 74
Erwinia tracheiphila SCR3 0.42 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.39 LU632_RS13150 ATP-dependent DNA helicase low > 74
Dickeya dadantii 3937 0.42 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.40 DDA3937_RS11240 ATP-dependent DNA helicase low > 74
Dickeya dianthicola 67-19 0.42 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.40 HGI48_RS11275 ATP-dependent DNA helicase low > 71
Enterobacter sp. TBS_079 0.42 MPMX20_00084 ATP-dependent DNA helicase RecG 0.40 MPMX20_02714 putative ATP-dependent DNA helicase YoaA low > 85
Serratia liquefaciens MT49 0.41 IAI46_24905 ATP-dependent DNA helicase RecG 0.39 IAI46_14550 ATP-dependent DNA helicase low > 86
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.40 EX28DRAFT_0750 Rad3-related DNA helicases low > 76
Pectobacterium carotovorum WPP14 0.41 HER17_RS21395 ATP-dependent DNA helicase RecG 0.40 HER17_RS11290 ATP-dependent DNA helicase low > 75
Klebsiella michiganensis M5al 0.41 BWI76_RS27440 DNA helicase RecG 0.40 BWI76_RS17815 ATP-dependent helicase low > 92
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_13680 DNA helicase RecG 0.40 CSW01_09930 ATP-dependent DNA helicase low > 62
Mycobacterium tuberculosis H37Rv 0.25 Rv2973c Probable ATP-dependent DNA helicase RecG 0.18 Rv1329c Probable ATP-dependent helicase DinG low > 58

Not shown: 30 genomes with orthologs for Dsui_0311 only; 2 genomes with orthologs for Dsui_2149 only