Conservation of cofitness between Dsui_2149 and Dsui_1811 in Dechlorosoma suillum PS

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_2149 DNA helicase, Rad3 1.0 Dsui_1811 recombination protein RecR 0.77 4
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS07580 helicase 0.72 RR42_RS13270 recombination protein RecR 0.59 7
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS14855 helicase 0.68 HSERO_RS18355 recombinase RecR low > 78
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS13325 ATP-dependent DNA helicase 0.70 ABZR87_RS10810 recombination mediator RecR low > 80
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS01530 ATP-dependent DNA helicase 0.67 RALBFv3_RS15170 recombination protein RecR low > 76
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS12495 helicase 0.69 BPHYT_RS09070 recombination protein RecR low > 109
Ralstonia solanacearum UW163 0.56 UW163_RS14840 ATP-dependent DNA helicase 0.67 UW163_RS12640 recombination protein RecR — —
Ralstonia solanacearum PSI07 0.56 RPSI07_RS15960 ATP-dependent DNA helicase 0.67 RPSI07_RS18205 recombination protein RecR — —
Ralstonia solanacearum GMI1000 0.56 RS_RS08195 ATP-dependent DNA helicase 0.67 RS_RS05980 recombination protein RecR low > 80
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_00533 ATP-dependent DNA helicase DinG 0.69 H281DRAFT_00834 DNA replication and repair protein RecR low > 103
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS06060 ATP-dependent DNA helicase 0.70 QEN71_RS22285 recombination mediator RecR low > 153
Paraburkholderia graminis OAS925 0.55 ABIE53_002724 ATP-dependent DNA helicase DinG 0.70 ABIE53_002048 recombination protein RecR 0.43 9
Castellaniella sp019104865 MT123 0.46 ABCV34_RS01875 ATP-dependent DNA helicase 0.59 ABCV34_RS15480 recombination mediator RecR low > 48
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_2492 Rad3-related DNA helicases 0.54 B158DRAFT_2480 DNA replication and repair protein RecR low > 40
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_02195 dinG helicase 0.55 OKGIIK_05655 recR recombination mediator RecR low > 52
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS12765 ATP-dependent DNA helicase 0.55 LRK54_RS01250 recombination mediator RecR low > 59
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS19750 ATP-dependent DNA helicase 0.55 ABZR86_RS06235 recombination mediator RecR low > 74
Rhodanobacter denitrificans MT42 0.42 LRK55_RS12465 ATP-dependent DNA helicase 0.55 LRK55_RS01020 recombination mediator RecR low > 63
Escherichia coli BL21 0.41 ECD_01778 putative ATP-dependent helicase, DinG family 0.53 ECD_00423 gap repair protein — —
Escherichia coli ECRC62 0.41 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA 0.53 BNILDI_22505 recR recombination mediator RecR — —
Escherichia coli ECOR38 0.41 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA 0.53 HEPCGN_06770 recR recombination mediator RecR low > 85
Escherichia coli ECRC98 0.41 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA 0.53 JDDGAC_11805 recR recombination mediator RecR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_01925 putative ATP-dependent helicase DinG 0.53 OHPLBJKB_03202 Recombination protein RecR low > 73
Escherichia coli ECRC101 0.41 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA 0.53 OKFHMN_08155 recR recombination mediator RecR — —
Escherichia coli ECOR27 0.41 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA 0.53 NOLOHH_01085 recR recombination mediator RecR low > 57
Escherichia coli ECRC102 0.41 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA 0.53 NIAGMN_06210 recR recombination mediator RecR — —
Escherichia coli ECRC99 0.41 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA 0.53 KEDOAH_19810 recR recombination mediator RecR — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS10055 ATP-dependent DNA helicase 0.53 ECOLIN_RS02805 recombination mediator RecR — —
Escherichia coli ECRC101 0.41 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA 0.53 MCAODC_27380 recR recombination mediator RecR — —
Escherichia fergusonii Becca 0.41 EFB2_02192 putative ATP-dependent DNA helicase YoaA 0.53 EFB2_03586 Recombination protein RecR low > 86
Escherichia coli BW25113 0.40 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) 0.53 b0472 recR recombination protein RecR (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF2823 DinG family ATP-dependent helicase YoaA 0.53 GFF4390 Recombination protein RecR low > 78
Pantoea sp. MT58 0.40 IAI47_08820 ATP-dependent DNA helicase 0.54 IAI47_14465 recombination protein RecR low > 76
Dickeya dadantii 3937 0.40 DDA3937_RS11240 ATP-dependent DNA helicase 0.54 DDA3937_RS05790 recombination protein RecR low > 74
Dickeya dianthicola 67-19 0.40 HGI48_RS11275 ATP-dependent DNA helicase 0.55 HGI48_RS05840 recombination protein RecR — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_0750 Rad3-related DNA helicases 0.53 EX28DRAFT_2485 DNA replication and repair protein RecR low > 76
Dickeya dianthicola ME23 0.40 DZA65_RS11620 ATP-dependent DNA helicase 0.55 DZA65_RS06165 recombination protein RecR low > 75
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_09930 ATP-dependent DNA helicase 0.55 CSW01_05375 recombination protein RecR low > 62
Enterobacter sp. TBS_079 0.40 MPMX20_02714 putative ATP-dependent DNA helicase YoaA 0.53 MPMX20_01074 Recombination protein RecR low > 85
Klebsiella michiganensis M5al 0.40 BWI76_RS17815 ATP-dependent helicase 0.54 BWI76_RS06830 recombination protein RecR low > 92
Pectobacterium carotovorum WPP14 0.40 HER17_RS11290 ATP-dependent DNA helicase 0.52 HER17_RS15695 recombination mediator RecR low > 75
Serratia liquefaciens MT49 0.39 IAI46_14550 ATP-dependent DNA helicase 0.53 IAI46_05240 recombination protein RecR low > 86
Alteromonas macleodii MIT1002 0.39 MIT1002_02593 putative ATP-dependent helicase DinG 0.55 MIT1002_02649 Recombination protein RecR low > 70
Erwinia tracheiphila SCR3 0.39 LU632_RS13150 ATP-dependent DNA helicase 0.55 LU632_RS18105 recR recombination mediator RecR low > 74
Rahnella sp. WP5 0.39 EX31_RS10615 ATP-dependent DNA helicase 0.53 EX31_RS22525 recombination protein RecR low > 89
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1496.1 DinG family ATP-dependent helicase YoaA 0.54 Xcc-8004.4012.1 Recombination protein RecR low > 74
Variovorax sp. OAS795 0.36 ABID97_RS14180 ATP-dependent DNA helicase 0.61 ABID97_RS14700 recombination mediator RecR low > 91
Lysobacter sp. OAE881 0.36 ABIE51_RS05195 ATP-dependent DNA helicase 0.60 ABIE51_RS14010 recombination mediator RecR low > 62
Acidovorax sp. GW101-3H11 0.36 Ac3H11_2460 DinG family ATP-dependent helicase YoaA 0.56 Ac3H11_473 Recombination protein RecR low > 79
Variovorax sp. SCN45 0.36 GFF986 DinG family ATP-dependent helicase YoaA 0.60 GFF1110 Recombination protein RecR low > 127
Shewanella loihica PV-4 0.34 Shew_2196 helicase c2 (RefSeq) 0.54 Shew_2233 recombination protein RecR (RefSeq) 0.36 35
Shewanella amazonensis SB2B 0.34 Sama_1940 ATP-dependent helicase DinG (RefSeq) 0.53 Sama_1312 recR recombination protein RecR (RefSeq) 0.63 9
Shewanella oneidensis MR-1 0.34 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) 0.52 SO2015 recR recombination protein RecR (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_1859 helicase c2 (RefSeq) 0.52 Shewana3_2444 recR recombination protein RecR (RefSeq) low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4872 DinG family ATP-dependent helicase YoaA 0.57 GFF4253 Recombination protein RecR low > 90
Mycobacterium tuberculosis H37Rv 0.18 Rv1329c Probable ATP-dependent helicase DinG 0.40 Rv3715c Probable recombination protein RecR low > 58
Pseudomonas sp. S08-1 0.16 OH686_04830 ATP-dependent helicase DinG/Rad3 0.52 OH686_02385 recombination protein RecR low > 80
Pseudomonas fluorescens GW456-L13 0.15 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 0.53 PfGW456L13_4074 Recombination protein RecR low > 87
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_17020 ATP-dependent DNA helicase DinG 0.52 AO353_00675 recombination protein RecR 0.49 13
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_05425 ATP-dependent DNA helicase DinG 0.52 AO356_02495 recombination protein RecR 0.65 7
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 0.52 Pf1N1B4_3864 Recombination protein RecR — —
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.52 PFLU_RS22415 recombination protein RecR low > 109
Pseudomonas fluorescens SBW25 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.52 PFLU_RS22415 recombination protein RecR low > 109
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 0.52 Pf6N2E2_2325 Recombination protein RecR 0.49 8
Pseudomonas sp. RS175 0.15 PFR28_00520 ATP-dependent DNA helicase DinG 0.53 PFR28_01077 Recombination protein RecR low > 88
Pseudomonas simiae WCS417 0.15 PS417_06510 ATP-dependent DNA helicase DinG 0.52 PS417_20800 recombination protein RecR 0.30 7
Pseudomonas stutzeri RCH2 0.15 Psest_2857 Rad3-related DNA helicases 0.53 Psest_2545 recombination protein RecR 0.19 33

Not shown: 2 genomes with orthologs for Dsui_2149 only; 34 genomes with orthologs for Dsui_1811 only