Conservation of cofitness between Dsui_2149 and Dsui_1227 in Dechlorosoma suillum PS

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_2149 DNA helicase, Rad3 1.0 Dsui_1227 DNA/RNA helicase, superfamily I 0.67 12
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS07580 helicase 0.62 RR42_RS15090 DNA helicase 0.41 14
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS14855 helicase 0.62 HSERO_RS02160 DNA-dependent helicase low > 78
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS13325 ATP-dependent DNA helicase 0.62 ABZR87_RS15705 UvrD-helicase domain-containing protein 0.33 18
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS12495 helicase 0.63 BPHYT_RS13840 DNA-dependent helicase — —
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS01530 ATP-dependent DNA helicase 0.61 RALBFv3_RS03775 DNA-dependent helicase — —
Ralstonia solanacearum UW163 0.56 UW163_RS14840 ATP-dependent DNA helicase 0.61 UW163_RS09895 DNA-dependent helicase — —
Ralstonia solanacearum PSI07 0.56 RPSI07_RS15960 ATP-dependent DNA helicase 0.62 RPSI07_RS13455 DNA-dependent helicase — —
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_00533 ATP-dependent DNA helicase DinG 0.63 H281DRAFT_04469 ATP-dependent DNA helicase UvrD — —
Ralstonia solanacearum GMI1000 0.56 RS_RS08195 ATP-dependent DNA helicase 0.61 RS_RS11220 DNA-dependent helicase low > 80
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS06060 ATP-dependent DNA helicase 0.62 QEN71_RS05110 3'-5' exonuclease — —
Paraburkholderia graminis OAS925 0.55 ABIE53_002724 ATP-dependent DNA helicase DinG 0.63 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS01875 ATP-dependent DNA helicase 0.59 ABCV34_RS05210 UvrD-helicase domain-containing protein low > 48
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_2492 Rad3-related DNA helicases 0.47 B158DRAFT_0238 Superfamily I DNA and RNA helicases 0.51 19
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_02195 dinG helicase 0.43 OKGIIK_16775 DNA helicase low > 52
Rhodanobacter denitrificans MT42 0.42 LRK55_RS12465 ATP-dependent DNA helicase 0.44 LRK55_RS06595 DNA helicase II — —
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS12765 ATP-dependent DNA helicase 0.44 LRK54_RS06850 DNA helicase II low > 59
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS19750 ATP-dependent DNA helicase 0.44 ABZR86_RS16965 DNA helicase II low > 74
Escherichia coli Nissle 1917 0.41 ECOLIN_RS10055 ATP-dependent DNA helicase 0.45 ECOLIN_RS21885 DNA helicase II — —
Escherichia coli ECRC102 0.41 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA 0.45 NIAGMN_12165 uvrD DNA helicase II — —
Escherichia coli ECRC62 0.41 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA 0.45 BNILDI_04995 uvrD DNA helicase II — —
Escherichia coli ECRC98 0.41 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA 0.45 JDDGAC_18035 uvrD DNA helicase II — —
Escherichia coli ECOR27 0.41 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA 0.45 NOLOHH_06540 uvrD DNA helicase II low > 57
Escherichia coli ECRC99 0.41 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA 0.45 KEDOAH_13740 uvrD DNA helicase II — —
Escherichia coli ECOR38 0.41 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA 0.45 HEPCGN_13115 uvrD DNA helicase II low > 85
Escherichia coli BL21 0.41 ECD_01778 putative ATP-dependent helicase, DinG family 0.45 ECD_03689 DNA-dependent ATPase I and helicase II — —
Escherichia coli ECRC101 0.41 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA 0.45 MCAODC_04915 uvrD DNA helicase II — —
Escherichia coli ECRC101 0.41 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA 0.45 OKFHMN_14410 uvrD DNA helicase II — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_01925 putative ATP-dependent helicase DinG 0.45 OHPLBJKB_04237 DNA helicase II 0.45 72
Escherichia fergusonii Becca 0.41 EFB2_02192 putative ATP-dependent DNA helicase YoaA 0.45 EFB2_04824 DNA helicase II low > 86
Escherichia coli BW25113 0.40 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) 0.45 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF2823 DinG family ATP-dependent helicase YoaA 0.45 GFF241 ATP-dependent DNA helicase UvrD/PcrA low > 78
Pantoea sp. MT58 0.40 IAI47_08820 ATP-dependent DNA helicase 0.44 IAI47_18390 DNA helicase II low > 76
Dickeya dadantii 3937 0.40 DDA3937_RS11240 ATP-dependent DNA helicase 0.45 DDA3937_RS19880 DNA helicase II low > 74
Dickeya dianthicola 67-19 0.40 HGI48_RS11275 ATP-dependent DNA helicase 0.45 HGI48_RS20035 DNA helicase II low > 71
Enterobacter asburiae PDN3 0.40 EX28DRAFT_0750 Rad3-related DNA helicases 0.45 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) low > 76
Dickeya dianthicola ME23 0.40 DZA65_RS11620 ATP-dependent DNA helicase 0.45 DZA65_RS21080 DNA helicase II low > 75
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_09930 ATP-dependent DNA helicase 0.45 CSW01_01015 DNA helicase II low > 62
Enterobacter sp. TBS_079 0.40 MPMX20_02714 putative ATP-dependent DNA helicase YoaA 0.45 MPMX20_04463 DNA helicase II low > 85
Klebsiella michiganensis M5al 0.40 BWI76_RS17815 ATP-dependent helicase 0.45 BWI76_RS01220 DNA-dependent helicase II low > 92
Pectobacterium carotovorum WPP14 0.40 HER17_RS11290 ATP-dependent DNA helicase 0.45 HER17_RS01360 DNA helicase II low > 75
Serratia liquefaciens MT49 0.39 IAI46_14550 ATP-dependent DNA helicase 0.44 IAI46_00735 DNA helicase II low > 86
Alteromonas macleodii MIT1002 0.39 MIT1002_02593 putative ATP-dependent helicase DinG 0.46 MIT1002_00153 DNA helicase II low > 70
Erwinia tracheiphila SCR3 0.39 LU632_RS13150 ATP-dependent DNA helicase 0.45 LU632_RS24125 uvrD DNA helicase II — —
Rahnella sp. WP5 0.39 EX31_RS10615 ATP-dependent DNA helicase 0.44 EX31_RS15175 DNA helicase II low > 89
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1496.1 DinG family ATP-dependent helicase YoaA 0.45 Xcc-8004.5114.1 ATP-dependent DNA helicase UvrD/PcrA low > 74
Variovorax sp. OAS795 0.36 ABID97_RS14180 ATP-dependent DNA helicase 0.61 ABID97_RS09150 UvrD-helicase domain-containing protein low > 91
Lysobacter sp. OAE881 0.36 ABIE51_RS05195 ATP-dependent DNA helicase 0.46 ABIE51_RS01985 DNA helicase II low > 62
Acidovorax sp. GW101-3H11 0.36 Ac3H11_2460 DinG family ATP-dependent helicase YoaA 0.61 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA low > 79
Variovorax sp. SCN45 0.36 GFF986 DinG family ATP-dependent helicase YoaA 0.60 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) low > 127
Shewanella loihica PV-4 0.34 Shew_2196 helicase c2 (RefSeq) 0.44 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) 0.46 25
Shewanella amazonensis SB2B 0.34 Sama_1940 ATP-dependent helicase DinG (RefSeq) 0.45 Sama_0419 uvrD DNA-dependent helicase II (RefSeq) low > 62
Shewanella oneidensis MR-1 0.34 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) 0.45 SO0467 uvrD DNA helicase II (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_1859 helicase c2 (RefSeq) 0.45 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4872 DinG family ATP-dependent helicase YoaA 0.61 GFF5598 ATP-dependent DNA helicase UvrD/PcrA — —
Mycobacterium tuberculosis H37Rv 0.18 Rv1329c Probable ATP-dependent helicase DinG 0.32 Rv0949 Probable ATP-dependent DNA helicase II UvrD1 low > 58
Pseudomonas sp. S08-1 0.16 OH686_04830 ATP-dependent helicase DinG/Rad3 0.42 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA low > 80
Pseudomonas fluorescens GW456-L13 0.15 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 0.44 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA 0.30 41
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_17020 ATP-dependent DNA helicase DinG 0.44 AO353_10055 DNA helicase II 0.54 7
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 0.43 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA — —
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_05425 ATP-dependent DNA helicase DinG 0.44 AO356_11990 DNA helicase II 0.71 6
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.44 PFLU_RS29900 DNA helicase II 0.23 19
Pseudomonas fluorescens SBW25 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.44 PFLU_RS29900 DNA helicase II 0.39 109
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 0.44 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA 0.48 9
Pseudomonas sp. RS175 0.15 PFR28_00520 ATP-dependent DNA helicase DinG 0.44 PFR28_04523 DNA helicase II low > 88
Pseudomonas stutzeri RCH2 0.15 Psest_2857 Rad3-related DNA helicases 0.44 Psest_4098 Superfamily I DNA and RNA helicases 0.20 28

Not shown: 3 genomes with orthologs for Dsui_2149 only; 30 genomes with orthologs for Dsui_1227 only