Conservation of cofitness between CSW01_10260 and CSW01_13285 in Vibrio cholerae E7946 ATCC 55056

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10260 thiol:disulfide interchange protein DsbE 1.0 CSW01_13285 ribulose-phosphate 3-epimerase 0.84 14
Escherichia coli Nissle 1917 0.69 ECOLIN_RS12830 thiol:disulfide interchange protein DsbE 0.77 ECOLIN_RS19345 ribulose-phosphate 3-epimerase — —
Escherichia coli ECRC101 0.69 MCAODC_14360 dsbE thiol:disulfide interchange protein DsbE 0.77 MCAODC_07660 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC62 0.69 BNILDI_13805 dsbE thiol:disulfide interchange protein DsbE 0.77 BNILDI_02600 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC98 0.69 JDDGAC_27270 dsbE thiol:disulfide interchange protein DsbE 0.77 JDDGAC_20760 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC99 0.69 KEDOAH_04875 dsbE thiol:disulfide interchange protein DsbE 0.77 KEDOAH_11010 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC100 0.69 OKFHMN_23310 dsbE thiol:disulfide interchange protein DsbE 0.77 OKFHMN_17130 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC102 0.69 NIAGMN_21075 dsbE thiol:disulfide interchange protein DsbE 0.77 NIAGMN_14900 dam adenine-specific DNA-methyltransferase — —
Escherichia coli BW25113 0.69 b2195 ccmG periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) 0.77 b3386 rpe ribulose-phosphate 3-epimerase (NCBI) low > 76
Escherichia fergusonii Becca 0.69 EFB2_01661 Thiol:disulfide interchange protein DsbE 0.77 EFB2_00442 Ribulose-phosphate 3-epimerase — —
Escherichia coli ECOR27 0.69 NOLOHH_14885 dsbE thiol:disulfide interchange protein DsbE 0.77 NOLOHH_08920 dam adenine-specific DNA-methyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_01516 Thiol:disulfide interchange protein DsbE 0.77 OHPLBJKB_00317 Ribulose-phosphate 3-epimerase — —
Escherichia coli BL21 0.69 ECD_02122 periplasmic thioredoxin of cytochrome c-type biogenesis 0.77 ECD_03238 D-ribulose-5-phosphate 3-epimerase low > 61
Escherichia coli ECOR38 0.68 HEPCGN_22575 dsbE thiol:disulfide interchange protein DsbE 0.77 HEPCGN_15950 rpe ribulose-phosphate 3-epimerase low > 88
Pantoea sp. MT58 0.67 IAI47_06095 DsbE family thiol:disulfide interchange protein 0.76 IAI47_01910 ribulose-phosphate 3-epimerase — —
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS00050 DsbE family thiol:disulfide interchange protein 0.76 PagCFBP13505_RS21685 ribulose-phosphate 3-epimerase — —
Serratia liquefaciens MT49 0.65 IAI46_18080 DsbE family thiol:disulfide interchange protein 0.76 IAI46_23685 ribulose-phosphate 3-epimerase low > 86
Klebsiella pneumoniae MKP103 0.65 KDGMDA_23840 DsbE family thiol:disulfide interchange protein 0.78 KDGMDA_06895 ribulose-phosphate 3-epimerase — —
Erwinia amylovora T8 0.63 OLJFJH_11105 DsbE family thiol:disulfide interchange protein 0.76 OLJFJH_04075 ribulose-phosphate 3-epimerase — —
Pectobacterium carotovorum WPP14 0.63 HER17_RS09060 DsbE family thiol:disulfide interchange protein 0.76 HER17_RS01795 ribulose-phosphate 3-epimerase low > 75
Rahnella sp. WP5 0.62 EX31_RS19740 DsbE family thiol:disulfide interchange protein 0.74 EX31_RS04705 ribulose-phosphate 3-epimerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4876 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 0.76 GFF633 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) — —
Marinobacter adhaerens HP15 0.49 HP15_2280 periplasmic protein thiol: disulfide oxidoreductase DsbE 0.69 HP15_3286 ribulose-phosphate 3-epimerase-like protein — —
Pseudomonas aeruginosa PA14 0.49 IKLFDK_07045 thiol:disulfide interchange protein DsbE 0.70 IKLFDK_22375 ribulose-phosphate 3-epimerase — —
Pseudomonas sp. SVBP6 0.48 COO64_RS25720 DsbE family thiol:disulfide interchange protein 0.71 COO64_RS22440 rpe ribulose-phosphate 3-epimerase — —
Pseudomonas putida KT2440 0.48 PP_4321 holocytochrome c synthetase subunit 0.71 PP_0415 ribulose-5-phosphate 3-epimerase — —
Pseudomonas sp. BP01 0.47 JOY50_RS00475 DsbE family thiol:disulfide interchange protein 0.71 JOY50_RS18210 rpe ribulose-phosphate 3-epimerase — —
Shewanella amazonensis SB2B 0.47 Sama_0249 thiol:disulfide interchange protein DsbE (RefSeq) 0.77 Sama_3362 ribulose-phosphate 3-epimerase (RefSeq) — —
Shewanella oneidensis MR-1 0.46 SO0267 dsbE thiol:disulfide interchange protein DsbE (NCBI ptt file) 0.78 SO0292 rpe ribulose-phosphate 3-epimerase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.45 Shewana3_0235 periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) 0.78 Shewana3_3888 ribulose-5-phosphate 3-epimerase (RefSeq) — —
Shewanella loihica PV-4 0.45 Shew_0194 periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) 0.77 Shew_0219 ribulose-phosphate 3-epimerase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.45 Psest_1760 periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 0.71 Psest_3652 ribulose-phosphate 3-epimerase — —
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_1329 periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 0.69 B158DRAFT_0267 ribulose-phosphate 3-epimerase — —
Pseudomonas segetis P6 0.43 MPMX49_03106 Thiol:disulfide interchange protein DsbE 0.71 MPMX49_00887 Ribulose-phosphate 3-epimerase — —
Pseudomonas sp. S08-1 0.42 OH686_02630 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 0.70 OH686_15115 ribulose-phosphate 3-epimerase — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_3387 Periplasmic protein thiol:disulfide oxidoreductase DsbE 0.71 Psyr_4611 ribulose-5-phosphate 3-epimerase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_3387 Periplasmic protein thiol:disulfide oxidoreductase DsbE 0.71 Psyr_4611 ribulose-5-phosphate 3-epimerase — —
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_18880 thiol:disulfide interchange protein 0.70 AO353_07240 ribulose phosphate epimerase — —
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_03630 thiol:disulfide interchange protein 0.70 AO356_14410 ribulose phosphate epimerase — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2554 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 0.71 Pf6N2E2_4820 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) — —
Pseudomonas simiae WCS417 0.40 PS417_08720 thiol:disulfide interchange protein 0.71 PS417_25735 ribulose-phosphate 3-epimerase — —
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_01876 Thiol:disulfide interchange protein DsbE 0.71 GEMAOFIL_05267 Ribulose-phosphate 3-epimerase — —
Pseudomonas sp. DMC3 0.40 GFF2491 Thiol:disulfide interchange protein DsbE 0.69 GFF22 Ribulose-phosphate 3-epimerase — —
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4310 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 0.70 PfGW456L13_1215 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) — —
Pseudomonas fluorescens SBW25 0.40 PFLU_RS08675 DsbE family thiol:disulfide interchange protein 0.71 PFLU_RS27390 ribulose-phosphate 3-epimerase — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS08675 DsbE family thiol:disulfide interchange protein 0.71 PFLU_RS27390 ribulose-phosphate 3-epimerase — —
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3645 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 0.71 Pf1N1B4_2543 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) — —
Pseudomonas sp. RS175 0.38 PFR28_00871 Thiol:disulfide interchange protein DsbE 0.70 PFR28_04049 Ribulose-phosphate 3-epimerase — —
Rhodanobacter sp000427505 FW510-R12 0.38 LRK53_RS12735 DsbE family thiol:disulfide interchange protein 0.66 LRK53_RS17105 ribulose-phosphate 3-epimerase — —
Rhodanobacter denitrificans MT42 0.37 LRK55_RS15810 DsbE family thiol:disulfide interchange protein 0.64 LRK55_RS11120 ribulose-phosphate 3-epimerase — —
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS16060 DsbE family thiol:disulfide interchange protein 0.63 LRK54_RS11390 ribulose-phosphate 3-epimerase — —
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_08590 bcp DsbE family thiol:disulfide interchange protein 0.62 OKGIIK_12435 rpe ribulose-phosphate 3-epimerase — —
Lysobacter sp. OAE881 0.36 ABIE51_RS08695 DsbE family thiol:disulfide interchange protein 0.66 ABIE51_RS04135 ribulose-phosphate 3-epimerase — —
Alteromonas macleodii MIT1002 0.36 MIT1002_00966 Cytochrome c biogenesis protein CcmG 0.74 MIT1002_00441 Ribulose-phosphate 3-epimerase — —
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS06450 DsbE family thiol:disulfide interchange protein 0.71 ABZR86_RS12200 ribulose-phosphate 3-epimerase — —
Dechlorosoma suillum PS 0.34 Dsui_1173 thiol-disulfide isomerase-like thioredoxin 0.66 Dsui_0221 ribulose-phosphate 3-epimerase — —
Dinoroseobacter shibae DFL-12 0.33 Dshi_3410 periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) 0.41 Dshi_3006 Ribulose-phosphate 3-epimerase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.33 PGA1_c18860 thiol:disulfide interchange protein CcmG 0.42 PGA1_c04170 ribulose-phosphate 3-epimerase Rpe — —
Sinorhizobium meliloti 1021 0.33 SMc03851 thiol:disulfide interchange protein (cytochrome C biogenesis protein) 0.44 SMc00511 D-ribulose-5-phosphate 3-epimerase — —
Rhodospirillum rubrum S1H 0.33 Rru_A0034 Periplasmic protein thiol-disulfide oxidoreductase DsbE (NCBI) 0.53 Rru_A2402 Ribulose-phosphate 3-epimerase (NCBI) — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS00745 thiol oxidoreductase DsbE 0.45 AZOBR_RS06755 ribulose-phosphate 3-epimerase — —
Xanthobacter sp. DMC5 0.31 GFF973 Thiol:disulfide interchange protein CycY 0.57 GFF2441 Ribulose-phosphate 3-epimerase — —
Rhizobium sp. OAE497 0.30 ABIE40_RS18300 DsbE family thiol:disulfide interchange protein 0.44 ABIE40_RS10105 ribulose-phosphate 3-epimerase — —
Azospirillum sp. SherDot2 0.30 MPMX19_02534 Thiol:disulfide interchange protein DsbE 0.56 MPMX19_02946 Ribulose-phosphate 3-epimerase — —
Magnetospirillum magneticum AMB-1 0.29 AMB_RS21255 DsbE family thiol:disulfide interchange protein 0.49 AMB_RS06980 ribulose-phosphate 3-epimerase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS12795 DsbE family thiol:disulfide interchange protein 0.44 A4249_RS13160 ribulose-phosphate 3-epimerase — —
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_03788 thiol:disulfide interchange protein tlpA 0.44 CCNA_00100 Ribulose-5-phosphate 3-epimerase — —
Caulobacter crescentus NA1000 0.28 CCNA_03788 thiol:disulfide interchange protein tlpA 0.44 CCNA_00100 Ribulose-5-phosphate 3-epimerase — —
Rhodopseudomonas palustris CGA009 0.28 TX73_001070 DsbE family thiol:disulfide interchange protein 0.39 TX73_019755 ribulose-phosphate 3-epimerase — —
Sphingobium sp. HT1-2 0.27 GFF84 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 0.47 GFF3274 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) — —
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_0171 Thiol-disulfide isomerase and thioredoxins 0.46 Ga0059261_2240 ribulose-phosphate 3-epimerase — —
Ralstonia solanacearum GMI1000 0.16 RS_RS13925 alkyl hydroperoxide reductase 0.63 RS_RS14420 ribulose-phosphate 3-epimerase — —
Paraburkholderia graminis OAS925 0.16 ABIE53_003565 thiol-disulfide isomerase/thioredoxin 0.66 ABIE53_003638 ribulose-phosphate 3-epimerase low > 113
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF5187 Thiol:disulfide oxidoreductase TlpA 0.60 GFF2197 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) — —
Fusobacterium nucleatum SB010 0.14 HUW76_06500 TlpA family protein disulfide reductase 0.41 HUW76_06410 ribulose-phosphate 3-epimerase — —

Not shown: 1 genomes with orthologs for CSW01_10260 only; 45 genomes with orthologs for CSW01_13285 only