| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03020 | | serine endoprotease DegQ | 1.0 | CSW01_12885 | | fructose 1,6-bisphosphatase | 0.65 | 12 |
| Dickeya dadantii 3937 | 0.63 | DDA3937_RS01605 | | serine endoprotease DegQ | 0.75 | DDA3937_RS18575 | | class 1 fructose-bisphosphatase | low | > 74 |
| Serratia liquefaciens MT49 | 0.63 | IAI46_22390 | | serine endoprotease DegQ | 0.76 | IAI46_01795 | | class 1 fructose-bisphosphatase | low | > 87 |
| Shewanella amazonensis SB2B | 0.63 | Sama_3073 | | serine protease (RefSeq) | 0.37 | Sama_0599 | | fructose-1,6-bisphosphatase (RefSeq) | — | — |
| Dickeya dianthicola 67-19 | 0.63 | HGI48_RS01520 | | serine endoprotease DegQ | 0.76 | HGI48_RS18510 | | class 1 fructose-bisphosphatase | low | > 71 |
| Dickeya dianthicola ME23 | 0.63 | DZA65_RS01585 | | serine endoprotease DegQ | 0.76 | DZA65_RS19645 | | class 1 fructose-bisphosphatase | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS19985 | | serine endoprotease DegQ | 0.76 | HER17_RS02620 | | class 1 fructose-bisphosphatase | low | > 75 |
| Shewanella oneidensis MR-1 | 0.60 | SO3942 | | serine protease, HtrA/DegQ/DegS family (NCBI ptt file) | 0.35 | SO3991 | fbp | fructose-1,6-bisphosphatase (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.60 | Shewana3_0690 | | peptidase Do (RefSeq) | 0.35 | Shewana3_0648 | | fructose-1,6-bisphosphatase (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.60 | Shew_3296 | | protease Do (RefSeq) | 0.35 | Shew_0773 | | fructose-1,6-bisphosphatase (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00842 | | Periplasmic pH-dependent serine endoprotease DegQ precursor | 0.35 | MIT1002_00169 | | Fructose-1,6-bisphosphatase class 1 | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF2974 | | Outer membrane stress sensor protease DegQ, serine protease | 0.76 | GFF880 | | Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) | low | > 78 |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS25365 | | serine endoprotease DegQ | 0.76 | BWI76_RS02815 | | fructose-bisphosphatase class I | low | > 92 |
| Pantoea sp. MT58 | 0.57 | IAI47_17260 | | serine endoprotease DegQ | 0.74 | IAI47_02750 | | class 1 fructose-bisphosphatase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.57 | MPMX20_04138 | | Periplasmic pH-dependent serine endoprotease DegQ | 0.76 | MPMX20_00514 | | Fructose-1,6-bisphosphatase class 1 | low | > 85 |
| Pantoea agglomerans CFBP13505 P0401 | 0.57 | PagCFBP13505_RS09425 | | serine endoprotease DegQ | 0.74 | PagCFBP13505_RS11345 | | class 1 fructose-bisphosphatase | low | > 74 |
| Enterobacter asburiae PDN3 | 0.57 | EX28DRAFT_3283 | | periplasmic serine protease, Do/DeqQ family | 0.76 | EX28DRAFT_3419 | | Fructose-1,6-bisphosphatase | low | > 76 |
| Klebsiella pneumoniae MKP103 | 0.57 | KDGMDA_06190 | | serine endoprotease DegQ | 0.76 | KDGMDA_11305 | | class 1 fructose-bisphosphatase | low | > 95 |
| Escherichia coli Nissle 1917 | 0.57 | ECOLIN_RS18545 | | serine endoprotease DegQ | 0.76 | ECOLIN_RS24555 | | class 1 fructose-bisphosphatase | low | > 55 |
| Escherichia coli ECOR27 | 0.57 | NOLOHH_09605 | degQ | serine endoprotease DegQ | 0.76 | NOLOHH_04205 | fbp | class 1 fructose-bisphosphatase | low | > 76 |
| Escherichia coli ECRC62 | 0.57 | BNILDI_01930 | degQ | serine endoprotease DegQ | 0.76 | BNILDI_07310 | fbp | class 1 fructose-bisphosphatase | low | > 75 |
| Escherichia coli BW25113 | 0.57 | b3234 | degQ | serine endoprotease, periplasmic (NCBI) | 0.76 | b4232 | fbp | fructose-1,6-bisphosphatase (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.57 | ECD_03094 | | serine endoprotease, periplasmic | 0.76 | ECD_04100 | | fructose-1,6-bisphosphatase I | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.57 | OHPLBJKB_00470 | | Periplasmic pH-dependent serine endoprotease DegQ | 0.76 | OHPLBJKB_03803 | | Fructose-1,6-bisphosphatase class 1 | low | > 74 |
| Escherichia fergusonii Becca | 0.57 | EFB2_00596 | | Periplasmic pH-dependent serine endoprotease DegQ | 0.76 | EFB2_04301 | | Fructose-1,6-bisphosphatase class 1 | low | > 86 |
| Escherichia coli ECRC98 | 0.57 | JDDGAC_21430 | degQ | serine endoprotease DegQ | 0.76 | JDDGAC_15585 | fbp | class 1 fructose-bisphosphatase | low | > 87 |
| Escherichia coli ECRC102 | 0.57 | NIAGMN_15565 | degQ | serine endoprotease DegQ | 0.76 | NIAGMN_09795 | fbp | class 1 fructose-bisphosphatase | low | > 80 |
| Escherichia coli ECRC100 | 0.57 | OKFHMN_17805 | degQ | serine endoprotease DegQ | 0.76 | OKFHMN_11945 | fbp | class 1 fructose-bisphosphatase | low | > 79 |
| Escherichia coli ECRC99 | 0.57 | KEDOAH_10345 | degQ | serine endoprotease DegQ | 0.76 | KEDOAH_16210 | fbp | class 1 fructose-bisphosphatase | — | — |
| Escherichia coli ECRC101 | 0.57 | MCAODC_08325 | degQ | serine endoprotease DegQ | 0.76 | MCAODC_02450 | fbp | class 1 fructose-bisphosphatase | low | > 87 |
| Escherichia coli ECOR38 | 0.57 | HEPCGN_16675 | degQ | serine endoprotease DegQ | 0.76 | HEPCGN_10145 | fbp | class 1 fructose-bisphosphatase | low | > 88 |
| Rahnella sp. WP5 | 0.56 | EX31_RS12475 | | Do family serine endopeptidase | 0.75 | EX31_RS08670 | | class 1 fructose-bisphosphatase | low | > 89 |
| Erwinia tracheiphila HP pepo 2.2 | 0.54 | IJEDHG_13665 | | serine endoprotease DegQ | 0.75 | IJEDHG_06785 | fbp | class 1 fructose-bisphosphatase | — | — |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS21355 | | Do family serine endopeptidase | 0.75 | LU632_RS02130 | fbp | class 1 fructose-bisphosphatase | — | — |
| Erwinia amylovora T8 | 0.52 | OLJFJH_00660 | | serine endoprotease DegP | 0.75 | OLJFJH_02370 | | class 1 fructose-bisphosphatase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.41 | ABZR86_RS17545 | | DegQ family serine endoprotease | 0.36 | ABZR86_RS15255 | | class 1 fructose-bisphosphatase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.40 | OKGIIK_00150 | | Periplasmic serine endoprotease DegP-like | 0.36 | OKGIIK_15125 | fbp | class 1 fructose-bisphosphatase | low | > 53 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.38 | Xcc-8004.4948.1 | | Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain | 0.38 | Xcc-8004.127.1 | | Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.37 | LRK54_RS06430 | | Do family serine endopeptidase | 0.36 | LRK54_RS08365 | | class 1 fructose-bisphosphatase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS06175 | | Do family serine endopeptidase | 0.36 | LRK55_RS08130 | | class 1 fructose-bisphosphatase | low | > 63 |
| Rhodanobacter sp000427505 FW510-R12 | 0.37 | LRK53_RS17720 | | Do family serine endopeptidase | 0.35 | LRK53_RS00140 | | class 1 fructose-bisphosphatase | low | > 59 |
| Lysobacter sp. OAE881 | 0.37 | ABIE51_RS03265 | | trypsin-like peptidase domain-containing protein | 0.36 | ABIE51_RS00860 | | class 1 fructose-bisphosphatase | low | > 62 |
| Magnetospirillum magneticum AMB-1 | 0.31 | AMB_RS17615 | | PDZ domain-containing protein | 0.41 | AMB_RS13390 | | fructose 1,6-bisphosphatase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.30 | TX73_016660 | | DegQ family serine endoprotease | 0.28 | TX73_024120 | | class 1 fructose-bisphosphatase | — | — |
| Rhodospirillum rubrum S1H | 0.30 | Rru_A2662 | | Peptidase S1C, Do (NCBI) | 0.37 | Rru_A2403 | | Inositol phosphatase/fructose-1,6-bisphosphatase (NCBI) | low | > 58 |
| Methylophilus sp. DMC18 | 0.30 | GFF1457 | | Periplasmic pH-dependent serine endoprotease DegQ | 0.31 | GFF2746 | | Fructose-1,6-bisphosphatase class 1 | low | > 43 |
| Sinorhizobium meliloti 1021 | 0.29 | SMc02365 | | protease precursor protein | 0.31 | SM_b20202 | | fructose-1,6-bisphosphatase | low | > 103 |
| Pseudomonas aeruginosa MRSN321 | 0.29 | DY961_RS08670 | mucD;inference=COORDINATES | serine protease MucD | 0.39 | DY961_RS11375 | | class 1 fructose-bisphosphatase | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.29 | DQ20_RS44180 | mucD;inference=COORDINATES | serine protease MucD | 0.39 | DQ20_RS50720 | | class 1 fructose-bisphosphatase | — | — |
| Xanthobacter sp. DMC5 | 0.29 | GFF3126 | | Periplasmic serine endoprotease DegP | 0.30 | GFF1141 | | Fructose-1,6-bisphosphatase class 1 | — | — |
| Pseudomonas aeruginosa PA14 | 0.29 | IKLFDK_03285 | | serine protease MucD | 0.40 | IKLFDK_27970 | | class 1 fructose-bisphosphatase | — | — |
| Dechlorosoma suillum PS | 0.29 | Dsui_1606 | | periplasmic serine protease, Do/DeqQ family | 0.41 | Dsui_1563 | | fructose-1,6-bisphosphatase | — | — |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS07245 | | DegQ family serine endoprotease | 0.37 | PFLU_RS01745 | | class 1 fructose-bisphosphatase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS07245 | | DegQ family serine endoprotease | 0.37 | PFLU_RS01745 | | class 1 fructose-bisphosphatase | — | — |
| Pseudomonas orientalis W4I3 | 0.29 | QF045_RS09850 | | DegQ family serine endoprotease | 0.38 | QF045_RS04755 | | class 1 fructose-bisphosphatase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.28 | PfGW456L13_4513 | | HtrA protease/chaperone protein | 0.39 | PfGW456L13_335 | | Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.28 | AO353_17640 | | serine peptidase | 0.38 | AO353_12205 | | fructose 1,6-bisphosphatase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS21975 | | peptidase | 0.41 | HSERO_RS17715 | | Fructose-1,6-bisphosphatase class 1 | — | — |
| Pseudomonas lactucae CFBP13502 | 0.28 | GEMAOFIL_01575 | | Periplasmic serine endoprotease DegP | 0.38 | GEMAOFIL_00560 | | Fructose-1,6-bisphosphatase class 1 | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_3326 | | HtrA protease/chaperone protein | 0.39 | Pf1N1B4_1596 | | Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) | — | — |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_3096 | | periplasmic serine protease, Do/DeqQ family | 0.39 | Psest_3956 | | Fructose-1,6-bisphosphatase | — | — |
| Pseudomonas segetis P6 | 0.28 | MPMX49_01404 | | Periplasmic serine endoprotease DegP | 0.40 | MPMX49_04276 | | Fructose-1,6-bisphosphatase class 1 | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.28 | A4249_RS07900 | | Do family serine endopeptidase | 0.34 | A4249_RS09315 | | class 1 fructose-bisphosphatase | low | > 48 |
| Pseudomonas sp. DMC3 | 0.28 | GFF2280 | | Periplasmic serine endoprotease DegP | 0.38 | GFF4070 | | Fructose-1,6-bisphosphatase class 1 | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.28 | DVU1468 | htrA | peptidase/PDZ domain protein (TIGR) | 0.48 | DVU1841 | fbp | fructose-1,6-bisphosphatase (TIGR) | low | > 55 |
| Pseudomonas fluorescens FW300-N2E2 | 0.28 | Pf6N2E2_2753 | | HtrA protease/chaperone protein | 0.38 | Pf6N2E2_3813 | | Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) | — | — |
| Pseudomonas sp. SVBP6 | 0.28 | COO64_RS16540 | | DegQ family serine endoprotease | 0.39 | COO64_RS13370 | | class 1 fructose-bisphosphatase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.28 | AO356_04560 | | serine peptidase | 0.38 | AO356_09670 | | fructose 1,6-bisphosphatase | — | — |
| Pseudomonas simiae WCS417 | 0.28 | PS417_07135 | | serine peptidase | 0.38 | PS417_01690 | | fructose 1,6-bisphosphatase | — | — |
| Pseudomonas putida KT2440 | 0.28 | PP_1430 | | putative periplasmic serine endoprotease DegP-like | 0.39 | PP_5040 | | fructose-1,6-bisphosphatase, class 1 | — | — |
| Pseudomonas sp. BP01 | 0.28 | JOY50_RS14680 | | DegQ family serine endoprotease | 0.38 | JOY50_RS09485 | | class 1 fructose-bisphosphatase | — | — |
| Sphingobium sp. HT1-2 | 0.27 | GFF2902 | | HtrA protease/chaperone protein | 0.36 | GFF5027 | | Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) | low | > 95 |
| Desulfovibrio vulgaris Miyazaki F | 0.27 | DvMF_0308 | | protease Do (RefSeq) | 0.49 | DvMF_0404 | | fructose-1,6-bisphosphatase (RefSeq) | — | — |
| Acinetobacter radioresistens SK82 | 0.27 | MPMX26_02161 | | Periplasmic pH-dependent serine endoprotease DegQ | 0.37 | MPMX26_02197 | | Fructose-1,6-bisphosphatase class 1 | — | — |
| Pseudomonas sp. S08-1 | 0.27 | OH686_20060 | | HtrA protease/chaperone protein | 0.39 | OH686_10290 | | Fructose-1,6-bisphosphatase, type I | — | — |
| Acinetobacter baumannii LAC-4 | 0.26 | RR41_RS05700 | | trypsin-like peptidase domain-containing protein | 0.39 | RR41_RS04640 | | class 1 fructose-bisphosphatase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.25 | CCNA_02846 | | DegP/HtrA-family serine protease | 0.36 | CCNA_01449 | | fructose-1,6-bisphosphatase, FIG superfamily | low | > 67 |
| Caulobacter crescentus NA1000 | 0.25 | CCNA_02846 | | DegP/HtrA-family serine protease | 0.36 | CCNA_01449 | | fructose-1,6-bisphosphatase, FIG superfamily | low | > 66 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.23 | ABZR88_RS21675 | | Do family serine endopeptidase | 0.65 | ABZR88_RS09750 | | class 1 fructose-bisphosphatase | low | > 71 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.23 | CA265_RS23030 | | serine protease | 0.64 | CA265_RS05220 | | fructose-bisphosphatase class I | low | > 88 |
Not shown: 13 genomes with orthologs for CSW01_03020 only; 24 genomes with orthologs for CSW01_12885 only