Conservation of cofitness between CSW01_02205 and CSW01_11210 in Vibrio cholerae E7946 ATCC 55056

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02205 ribonuclease E/G 1.0 CSW01_11210 flagellar hook protein FlgE 0.78 14
Dickeya dadantii 3937 0.80 DDA3937_RS01450 ribonuclease G 0.19 DDA3937_RS13465 flagellar hook protein FlgE low > 74
Escherichia coli ECRC98 0.80 JDDGAC_21370 rng ribonuclease G 0.22 JDDGAC_07320 flgE flagellar hook protein FlgE low > 87
Escherichia coli ECRC99 0.80 KEDOAH_10405 rng ribonuclease G 0.22 KEDOAH_24095 flgE flagellar hook protein FlgE — —
Escherichia coli ECRC101 0.80 MCAODC_08265 rng ribonuclease G 0.22 MCAODC_23020 flgE flagellar hook protein FlgE low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_00458 Ribonuclease G 0.22 OHPLBJKB_02589 Flagellar hook protein FlgE low > 74
Escherichia coli BW25113 0.80 b3247 cafA bundles of cytoplasmic filaments (VIMSS) 0.22 b1076 flgE flagellar hook protein E (NCBI) low > 76
Escherichia coli ECRC102 0.80 NIAGMN_15505 rng ribonuclease G 0.22 NIAGMN_24170 flgE flagellar hook protein FlgE low > 80
Escherichia coli ECOR27 0.80 NOLOHH_09530 rng ribonuclease G 0.22 NOLOHH_21190 flgE flagellar hook protein FlgE low > 76
Escherichia coli BL21 0.80 ECD_03106 ribonuclease G 0.22 ECD_01072 flagellar hook protein low > 61
Escherichia fergusonii Becca 0.80 EFB2_00584 Ribonuclease G 0.22 EFB2_02898 Flagellar hook protein FlgE low > 86
Escherichia coli ECRC100 0.80 OKFHMN_17745 rng ribonuclease G 0.22 OKFHMN_03660 flgE flagellar hook protein FlgE low > 79
Escherichia coli ECRC62 0.80 BNILDI_01990 rng ribonuclease G 0.22 BNILDI_19350 flgE flagellar hook protein FlgE low > 75
Escherichia coli Nissle 1917 0.80 ECOLIN_RS18605 ribonuclease G 0.22 ECOLIN_RS06230 flagellar hook protein FlgE — —
Escherichia coli ECOR38 0.80 HEPCGN_16610 rng ribonuclease G 0.22 HEPCGN_23830 flgE flagellar hook protein FlgE low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.22 GFF3357 Flagellar hook protein FlgE low > 78
Dickeya dianthicola ME23 0.80 DZA65_RS01430 ribonuclease G 0.19 DZA65_RS13995 flagellar hook protein FlgE low > 75
Dickeya dianthicola 67-19 0.80 HGI48_RS01370 ribonuclease G 0.18 HGI48_RS13510 flagellar hook protein FlgE low > 71
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3297 ribonuclease, Rne/Rng family 0.22 EX28DRAFT_1856 flagellar hook-basal body protein low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_04153 Ribonuclease G 0.23 MPMX20_01755 Flagellar hook protein FlgE low > 85
Serratia liquefaciens MT49 0.80 IAI46_22700 ribonuclease G 0.20 IAI46_15945 flagellar hook protein FlgE low > 87
Pectobacterium carotovorum WPP14 0.79 HER17_RS20150 ribonuclease G 0.19 HER17_RS08180 flagellar hook protein FlgE low > 75
Rahnella sp. WP5 0.79 EX31_RS12255 ribonuclease G 0.20 EX31_RS11300 flagellar hook protein FlgE low > 89
Erwinia amylovora T8 0.79 OLJFJH_06930 ribonuclease G 0.20 OLJFJH_15610 flagellar hook protein FlgE low > 58
Erwinia tracheiphila HP pepo 2.2 0.79 IJEDHG_13580 rng ribonuclease G 0.19 IJEDHG_21060 flgE flagellar hook protein FlgE low > 61
Erwinia tracheiphila SCR3 0.79 LU632_RS21430 rng ribonuclease G 0.19 LU632_RS10410 flgE flagellar hook protein FlgE low > 73
Pantoea agglomerans CFBP13505 P0401 0.78 PagCFBP13505_RS11050 ribonuclease G 0.20 PagCFBP13505_RS05185 flagellar hook protein FlgE 0.82 14
Pantoea sp. MT58 0.78 IAI47_02455 ribonuclease G 0.21 IAI47_12150 flagellar hook protein FlgE low > 76
Alteromonas macleodii MIT1002 0.74 MIT1002_00224 Ribonuclease G 0.38 MIT1002_01042 Flagellar hook protein FlgE low > 70
Shewanella oneidensis MR-1 0.74 SO4094 cafA ribonuclease G (NCBI ptt file) 0.42 SO3247 flgE flagellar hook protein FlgE (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.74 Shewana3_3644 ribonuclease G (RefSeq) 0.42 Shewana3_1324 flgE flagellar hook protein FlgE (RefSeq) low > 73
Shewanella amazonensis SB2B 0.72 Sama_0471 ribonuclease G (RefSeq) 0.42 Sama_2315 flgE flagellar hook protein FlgE (RefSeq) low > 62
Shewanella loihica PV-4 0.72 Shew_0407 ribonuclease G (RefSeq) 0.41 Shew_1348 flgE flagellar hook protein FlgE (RefSeq) low > 60
Pseudomonas fluorescens SBW25 0.57 PFLU_RS04325 ribonuclease G 0.22 PFLU_RS23165 flagellar hook protein FlgE low > 109
Pseudomonas sp. DMC3 0.57 GFF1813 Ribonuclease G 0.23 GFF4847 Flagellar hook protein FlgE 0.60 87
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_07110 ribonuclease G 0.23 AO356_18930 flagellar biosynthesis protein FlgE low > 104
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS04325 ribonuclease G 0.22 PFLU_RS23165 flagellar hook protein FlgE low > 109
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.22 Pf6N2E2_5697 Flagellar hook protein FlgE low > 103
Pseudomonas simiae WCS417 0.57 PS417_04270 ribonuclease G 0.22 PS417_21555 flagellar hook protein FlgE low > 88
Pseudomonas orientalis W4I3 0.57 QF045_RS07260 ribonuclease G 0.22 QF045_RS23640 flagellar hook protein FlgE low > 93
Dechlorosoma suillum PS 0.57 Dsui_0434 ribonuclease, Rne/Rng family 0.23 Dsui_1735 flagellar hook-basal body proteins low > 51
Pseudomonas aeruginosa PA14 0.57 IKLFDK_01695 ribonuclease G 0.23 IKLFDK_04960 flagellar hook protein FlgE low > 98
Pseudomonas aeruginosa MRSN321 0.57 DY961_RS24090 rng;go_function=RNA ribonuclease G 0.23 DY961_RS07050 flgE;inference=COORDINATES flagellar hook protein FlgE low > 100
Pseudomonas aeruginosa PUPa3 0.57 DQ20_RS56550 rng;go_function=RNA ribonuclease G 0.23 DQ20_RS45735 flgE;inference=COORDINATES flagellar hook protein FlgE 0.34 62
Pseudomonas sp. RS175 0.57 PFR28_00158 Ribonuclease G 0.24 PFR28_03251 Flagellar hook protein FlgE low > 88
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.25 Pf1N1B4_3475 Flagellar hook protein FlgE low > 87
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_01059 Ribonuclease G 0.23 GEMAOFIL_04454 Flagellar hook protein FlgE 0.60 54
Pseudomonas putida KT2440 0.57 PP_0937 endoribonuclease G (RNAse G) 0.24 PP_4388 Flagellar hook protein FlgE low > 96
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.23 PfGW456L13_2004 Flagellar hook protein FlgE low > 87
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS24430 ribonuclease G 0.23 QEN71_RS39330 flagellar hook protein FlgE low > 153
Pseudomonas sp. BP01 0.56 JOY50_RS11055 rng ribonuclease G 0.24 JOY50_RS00780 flgE flagellar hook protein FlgE low > 84
Pseudomonas stutzeri RCH2 0.56 Psest_3323 ribonuclease, Rne/Rng family 0.21 Psest_4150 fagellar hook-basal body proteins low > 67
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_05230 ribonuclease G 0.23 AO353_02845 flagellar biosynthesis protein FlgE low > 101
Pseudomonas sp. SVBP6 0.56 COO64_RS04210 rng ribonuclease G 0.24 COO64_RS21385 flgE flagellar hook protein FlgE low > 93
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4159 RNAse G 0.27 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4159 RNAse G 0.27 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE low > 86
Pseudomonas sp. S08-1 0.56 OH686_08595 Ribonuclease G 0.25 OH686_02960 Flagellar hook protein FlgE low > 80
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS06375 ribonuclease 0.23 BPHYT_RS11995 flagellar hook protein FlgE low > 109
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1880.1 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.26 Xcc-8004.2781.1 Flagellar hook protein FlgE low > 74
Pseudomonas segetis P6 0.55 MPMX49_03868 Ribonuclease G 0.26 MPMX49_03164 Flagellar hook protein FlgE low > 75
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS17790 ribonuclease 0.24 HSERO_RS17660 flagellar hook protein FlgE — —
Lysobacter sp. OAE881 0.53 ABIE51_RS06785 ribonuclease G 0.26 ABIE51_RS16685 flagellar hook protein FlgE low > 62
Rhodanobacter sp000427505 FW510-R12 0.52 LRK53_RS06540 ribonuclease G 0.25 LRK53_RS15160 flagellar hook protein FlgE low > 59
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_10290 rng ribonuclease G 0.24 OKGIIK_02665 flgE flagellar hook protein FlgE low > 53
Ralstonia solanacearum PSI07 0.51 RPSI07_RS13650 ribonuclease G 0.25 RPSI07_RS01405 flagellar hook protein FlgE — —
Ralstonia solanacearum GMI1000 0.51 RS_RS11025 ribonuclease G 0.26 RS_RS18810 flagellar hook protein FlgE — —
Variovorax sp. SCN45 0.51 GFF295 Ribonuclease G 0.23 GFF5718 Flagellar hook protein FlgE low > 127
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS03575 ribonuclease G 0.26 RALBFv3_RS21725 flagellar hook protein FlgE — —
Ralstonia solanacearum UW163 0.51 UW163_RS10095 ribonuclease G 0.26 UW163_RS17460 flagellar hook protein FlgE — —
Castellaniella sp019104865 MT123 0.51 ABCV34_RS02480 ribonuclease G 0.22 ABCV34_RS05755 flagellar hook protein FlgE low > 48
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS15440 ribonuclease G 0.25 ABZR87_RS22275 flagellar hook protein FlgE 0.56 43
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS21730 ribonuclease G 0.24 ABZR86_RS20090 flagellar hook protein FlgE low > 74
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS04700 ribonuclease G 0.17 RR42_RS35710 flagellar hook protein FlgE low > 128
Rhodanobacter denitrificans MT42 0.50 LRK55_RS03155 ribonuclease G 0.25 LRK55_RS13160 flagellar hook protein FlgE low > 63
Methylophilus sp. DMC18 0.50 GFF861 Ribonuclease G 0.24 GFF560 Flagellar hook protein FlgE low > 43
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS03405 ribonuclease G 0.24 LRK54_RS13420 flagellar hook protein FlgE low > 59
Acidovorax sp. GW101-3H11 0.50 Ac3H11_2416 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.26 Ac3H11_1374 Flagellar hook protein FlgE low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF4531 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.21 GFF1412 Flagellar hook protein FlgE low > 90

Not shown: 16 genomes with orthologs for CSW01_02205 only; 14 genomes with orthologs for CSW01_11210 only