Conservation of cofitness between CSW01_08135 and CSW01_09655 in Vibrio cholerae E7946 ATCC 55056

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08135 MFS transporter 1.0 CSW01_09655 SELO family protein 0.64 20
Shewanella loihica PV-4 0.27 Shew_1441 major facilitator transporter (RefSeq) 0.41 Shew_0262 hypothetical protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.26 SO1917 multidrug resistance protein, putative (NCBI ptt file) 0.40 SO0330 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.25 Shewana3_1692 Xaa-His dipeptidase (RefSeq) 0.40 Shewana3_3841 hypothetical protein (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.387.1 Permeases of the major facilitator superfamily 0.30 Xcc-8004.2272.1 Selenoprotein O and cysteine-containing homologs low > 74
Pseudomonas aeruginosa MRSN321 0.24 DY961_RS10970 MFS transporter 0.42 DY961_RS10935 YdiU family protein low > 100
Pseudomonas aeruginosa PA14 0.24 IKLFDK_28385 MFS transporter 0.42 IKLFDK_28420 YdiU family protein low > 98
Pseudomonas aeruginosa PUPa3 0.24 DQ20_RS51105 MFS transporter 0.42 DQ20_RS51140 YdiU family protein low > 101
Dechlorosoma suillum PS 0.24 Dsui_2798 arabinose efflux permease family protein 0.29 Dsui_1465 hypothetical protein low > 51
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_09295 hypothetical protein 0.43 AO356_09050 hypothetical protein low > 104
Serratia liquefaciens MT49 0.24 IAI46_11675 MFS transporter 0.44 IAI46_11065 YdiU family protein low > 87
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_256 Permeases of the major facilitator superfamily 0.43 PfGW456L13_231 Selenoprotein O and cysteine-containing homologs low > 87
Klebsiella michiganensis M5al 0.24 BWI76_RS15965 MFS transporter 0.45 BWI76_RS17085 hypothetical protein low > 92
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_12595 hypothetical protein 0.43 AO353_12770 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_3736 Permeases of the major facilitator superfamily 0.42 Pf6N2E2_3692 Selenoprotein O and cysteine-containing homologs low > 103
Klebsiella pneumoniae MKP103 0.24 KDGMDA_21220 MFS transporter 0.44 KDGMDA_24305 protein adenylyltransferase SelO low > 95
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS00235 MFS transporter 0.42 HSERO_RS11220 hypothetical protein low > 78
Pseudomonas sp. RS175 0.24 PFR28_05018 Inner membrane transport protein YnfM 0.45 PFR28_05043 Protein adenylyltransferase SelO low > 88
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_1531 Permeases of the major facilitator superfamily 0.43 Pf1N1B4_1498 Selenoprotein O and cysteine-containing homologs low > 87
Pseudomonas sp. BP01 0.23 JOY50_RS09340 MFS transporter 0.44 JOY50_RS09370 selO protein adenylyltransferase SelO low > 84
Escherichia coli ECOR27 0.23 NOLOHH_18235 araJ MFS transporter 0.43 NOLOHH_17645 selO protein adenylyltransferase SelO low > 76
Escherichia coli BW25113 0.23 b1596 ynfM predicted transporter (NCBI) 0.44 b1706 ydiU hypothetical protein (NCBI) low > 76
Escherichia coli ECRC100 0.23 OKFHMN_27730 ynfM Inner membrane transport protein YnfM 0.43 OKFHMN_27125 selO protein adenylyltransferase SelO low > 79
Escherichia coli ECRC101 0.23 MCAODC_17680 ynfM Inner membrane transport protein YnfM 0.43 MCAODC_18285 selO protein adenylyltransferase SelO low > 87
Escherichia coli ECRC98 0.23 JDDGAC_02320 ynfM Inner membrane transport protein YnfM 0.43 JDDGAC_01700 selO protein adenylyltransferase SelO low > 87
Escherichia coli ECOR38 0.23 HEPCGN_06105 ynfM Inner membrane transport protein YnfM 0.43 HEPCGN_05490 selO protein adenylyltransferase SelO low > 88
Escherichia coli BL21 0.23 ECD_01565 putative arabinose efflux transporter 0.44 ECD_01675 UPF0061 family protein low > 61
Escherichia coli ECRC102 0.23 NIAGMN_00345 ynfM Inner membrane transport protein YnfM 0.43 NIAGMN_00940 selO protein adenylyltransferase SelO low > 80
Escherichia coli Nissle 1917 0.23 ECOLIN_RS08915 MFS transporter 0.43 ECOLIN_RS09535 protein adenylyltransferase SelO low > 55
Pseudomonas simiae WCS417 0.23 PS417_02015 membrane protein 0.43 PS417_02140 hypothetical protein low > 88
Escherichia fergusonii Becca 0.23 EFB2_02396 Inner membrane transport protein YnfM 0.43 EFB2_02285 Protein adenylyltransferase SelO low > 86
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS02060 MFS transporter 0.42 PFLU_RS02195 YdiU family protein low > 109
Pseudomonas putida KT2440 0.23 PP_5072 efflux transporter 0.44 PP_5068 conserved protein of unknown function, UPF0061 family 0.15 14
Acinetobacter radioresistens SK82 0.23 MPMX26_00126 Inner membrane transport protein YnfM 0.34 MPMX26_02624 Protein adenylyltransferase SelO — —
Escherichia coli ECRC99 0.23 KEDOAH_00375 araJ MFS transporter 0.43 KEDOAH_00985 selO protein adenylyltransferase SelO — —
Pseudomonas fluorescens SBW25 0.23 PFLU_RS02060 MFS transporter 0.42 PFLU_RS02195 YdiU family protein low > 109
Pectobacterium carotovorum WPP14 0.23 HER17_RS10745 MFS transporter 0.44 HER17_RS08850 YdiU family protein low > 75
Enterobacter sp. TBS_079 0.23 MPMX20_02061 Inner membrane transport protein YnfM 0.44 MPMX20_01907 Protein adenylyltransferase SelO low > 85
Rahnella sp. WP5 0.23 EX31_RS16995 MFS transporter 0.43 EX31_RS13970 YdiU family protein 0.23 85
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS32385 MFS transporter 0.39 QEN71_RS21900 YdiU family protein low > 153
Pseudomonas orientalis W4I3 0.23 QF045_RS05075 MFS transporter 0.43 QF045_RS05205 YdiU family protein low > 93
Pseudomonas sp. DMC3 0.23 GFF3107 Inner membrane transport protein YnfM 0.41 GFF3135 Protein adenylyltransferase SelO low > 89
Pseudomonas sp. SVBP6 0.23 COO64_RS13105 MFS transporter 0.42 COO64_RS13240 selO protein adenylyltransferase SelO low > 93
Pantoea agglomerans CFBP13505 P0401 0.22 PagCFBP13505_RS06415 MFS transporter 0.43 PagCFBP13505_RS17670 YdiU family protein low > 74
Rhizobium sp. OAE497 0.22 ABIE40_RS01535 MFS transporter 0.33 ABIE40_RS04755 protein adenylyltransferase SelO low > 107
Pseudomonas lactucae CFBP13502 0.22 GEMAOFIL_00635 Inner membrane transport protein YnfM 0.43 GEMAOFIL_00665 Protein adenylyltransferase SelO low > 96
Paraburkholderia graminis OAS925 0.22 ABIE53_000436 YNFM family putative membrane transporter 0.39 ABIE53_002149 uncharacterized protein YdiU (UPF0061 family) low > 113
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0420 General substrate transporter:Major facilitator superfamily 0.42 Psyr_0494 Protein of unknown function UPF0061 0.50 22
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0420 General substrate transporter:Major facilitator superfamily 0.42 Psyr_0494 Protein of unknown function UPF0061 low > 86
Pantoea sp. MT58 0.22 IAI47_09740 MFS transporter 0.43 IAI47_10920 YdiU family protein low > 76
Enterobacter asburiae PDN3 0.22 EX28DRAFT_1495 Arabinose efflux permease 0.44 EX28DRAFT_1713 Uncharacterized conserved protein low > 76
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_02192 MFS transporter, YNFM family, putative membrane transport protein 0.39 H281DRAFT_00914 Uncharacterized conserved protein YdiU, UPF0061 family low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF1787 Permeases of the major facilitator superfamily 0.44 GFF3534 Selenoprotein O and cysteine-containing homologs low > 78
Pseudomonas stutzeri RCH2 0.21 Psest_3708 Arabinose efflux permease 0.42 Psest_0396 Uncharacterized conserved protein low > 67
Erwinia amylovora T8 0.21 OLJFJH_14285 MFS transporter 0.44 OLJFJH_14650 YdiU family protein low > 58
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS01705 MFS transporter 0.39 BPHYT_RS09550 hypothetical protein low > 109
Shewanella amazonensis SB2B 0.20 Sama_2214 multidrug resistance protein, putative (RefSeq) 0.30 Sama_2755 hypothetical protein (RefSeq) low > 62
Dickeya dadantii 3937 0.20 DDA3937_RS10665 MFS transporter 0.44 DDA3937_RS12935 YdiU family protein low > 74
Dickeya dianthicola 67-19 0.20 HGI48_RS10665 MFS transporter 0.44 HGI48_RS13010 YdiU family protein low > 71
Acinetobacter baumannii LAC-4 0.19 RR41_RS01155 MFS transporter 0.33 RR41_RS03080 YdiU family protein low > 55
Dickeya dianthicola ME23 0.19 DZA65_RS11135 MFS transporter 0.44 DZA65_RS13470 YdiU family protein low > 75
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS07785 MFS transporter 0.32 ABZR86_RS00335 protein adenylyltransferase SelO low > 74
Pseudomonas segetis P6 0.18 MPMX49_01797 Inner membrane transport protein YnfM 0.43 MPMX49_04221 Protein adenylyltransferase SelO low > 75
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS07480 MFS transporter 0.41 RALBFv3_RS01180 YdiU family protein low > 76
Ralstonia solanacearum UW163 0.18 UW163_RS06140 MFS transporter 0.41 UW163_RS14490 YdiU family protein — —
Ralstonia solanacearum GMI1000 0.17 RS_RS15415 MFS transporter 0.40 RS_RS08830 YdiU family protein low > 80
Ralstonia solanacearum PSI07 0.17 RPSI07_RS09770 MFS transporter 0.40 RPSI07_RS16295 YdiU family protein low > 81
Rhodanobacter sp000427505 FW510-R12 0.17 LRK53_RS12540 MFS transporter 0.31 LRK53_RS12815 YdiU family protein low > 59
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS16275 MFS transporter 0.31 LRK54_RS15955 YdiU family protein low > 59
Rhodanobacter denitrificans MT42 0.17 LRK55_RS16025 MFS transporter 0.31 LRK55_RS15710 YdiU family protein low > 63
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS03160 MFS transporter 0.40 ABZR87_RS12630 protein adenylyltransferase SelO low > 80
Rhodanobacter sp. FW510-T8 0.15 OKGIIK_08395 araJ MFS transporter 0.31 OKGIIK_09030 selO YdiU family protein low > 53
Castellaniella sp019104865 MT123 0.13 ABCV34_RS01130 MFS transporter 0.32 ABCV34_RS04315 YdiU family protein low > 48
Xanthobacter sp. DMC5 0.08 GFF4042 hypothetical protein 0.33 GFF2077 Protein adenylyltransferase SelO — —
Sinorhizobium meliloti 1021 0.06 SMa1959 hypothetical protein 0.31 SMc00453 hypothetical protein low > 103

Not shown: 9 genomes with orthologs for CSW01_08135 only; 19 genomes with orthologs for CSW01_09655 only