Conservation of cofitness between CSW01_01415 and CSW01_09560 in Vibrio cholerae E7946 ATCC 55056

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01415 phosphoribosylamine--glycine ligase 1.0 CSW01_09560 orotidine-5'-phosphate decarboxylase 0.55 5
Enterobacter sp. TBS_079 0.80 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.68 MPMX20_02494 Orotidine 5'-phosphate decarboxylase 0.86 32
Enterobacter asburiae PDN3 0.80 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.67 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Serratia liquefaciens MT49 0.79 IAI46_01360 phosphoribosylamine--glycine ligase 0.67 IAI46_13915 orotidine-5'-phosphate decarboxylase 0.71 55
Escherichia coli BW25113 0.79 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 0.69 b1281 pyrF orotidine 5'-phosphate decarboxylase (NCBI) 0.90 10
Pectobacterium carotovorum WPP14 0.79 HER17_RS20340 phosphoribosylamine--glycine ligase 0.65 HER17_RS09390 orotidine-5'-phosphate decarboxylase 0.96 6
Klebsiella pneumoniae MKP103 0.79 KDGMDA_10095 phosphoribosylamine--glycine ligase 0.68 KDGMDA_19655 orotidine-5'-phosphate decarboxylase low > 94
Escherichia coli ECOR27 0.79 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 0.68 NOLOHH_20215 pyrF orotidine-5'-phosphate decarboxylase 0.83 30
Dickeya dadantii 3937 0.79 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.64 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase 0.87 7
Dickeya dianthicola 67-19 0.79 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.64 HGI48_RS12580 orotidine-5'-phosphate decarboxylase 0.76 17
Klebsiella pneumoniae MRSN742743 0.79 GJGHJB_04747 purD Phosphoribosylamine--glycine ligase 0.68 GJGHJB_02924 pyrF orotidine-5'-phosphate decarboxylase low > 83
Escherichia coli Nissle 1917 0.79 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.64 ECOLIN_RS07730 orotidine-5'-phosphate decarboxylase — —
Escherichia fergusonii Becca 0.79 EFB2_04605 Phosphoribosylamine--glycine ligase 0.68 EFB2_02644 Orotidine 5'-phosphate decarboxylase low > 86
Pantoea sp. MT58 0.79 IAI47_18045 phosphoribosylamine--glycine ligase 0.63 IAI47_09275 orotidine-5'-phosphate decarboxylase 0.96 9
Dickeya dianthicola ME23 0.79 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.63 DZA65_RS13030 orotidine-5'-phosphate decarboxylase 0.65 42
Escherichia coli ECRC101 0.79 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 0.68 MCAODC_15715 pyrF orotidine-5'-phosphate decarboxylase low > 87
Escherichia coli ECRC98 0.79 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 0.68 JDDGAC_05095 pyrF orotidine-5'-phosphate decarboxylase low > 87
Escherichia coli ECRC102 0.79 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 0.68 NIAGMN_26720 pyrF orotidine-5'-phosphate decarboxylase 0.85 27
Escherichia coli ECRC99 0.79 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 0.68 KEDOAH_26215 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECRC100 0.79 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 0.68 OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase 0.79 43
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 0.68 OHPLBJKB_02401 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.43 6
Escherichia coli ECRC62 0.79 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 0.68 BNILDI_18365 pyrF orotidine-5'-phosphate decarboxylase 0.93 18
Escherichia coli BL21 0.79 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 0.68 ECD_01258 orotidine-5'-phosphate decarboxylase 0.82 14
Pantoea agglomerans CFBP13505 P0401 0.79 PagCFBP13516_RS18290 purD phosphoribosylamine--glycine ligase 0.64 PagCFBP13516_RS09410 pyrF orotidine-5'-phosphate decarboxylase low > 80
Escherichia coli ECOR38 0.78 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.68 HEPCGN_25650 pyrF orotidine-5'-phosphate decarboxylase 0.91 13
Erwinia amylovora T8 0.78 OLJFJH_06780 phosphoribosylamine--glycine ligase 0.63 OLJFJH_13570 orotidine-5'-phosphate decarboxylase 0.76 10
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.63 GFF2704 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 low > 78
Klebsiella michiganensis M5al 0.78 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.69 BWI76_RS11965 orotidine-5'-phosphate decarboxylase 0.75 54
Marinobacter adhaerens HP15 0.77 HP15_3228 phosphoribosylamine-glycine ligase 0.65 HP15_1370 orotidine 5'-phosphate decarboxylase — —
Rahnella sp. WP5 0.77 EX31_RS16855 phosphoribosylamine--glycine ligase 0.64 EX31_RS09855 orotidine-5'-phosphate decarboxylase 0.90 57
Erwinia tracheiphila SCR3 0.77 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.62 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase 0.93 6
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_10925 purD phosphoribosylamine--glycine ligase 0.62 IJEDHG_23775 pyrF orotidine-5'-phosphate decarboxylase 0.83 17
Pseudomonas sp. BP01 0.76 JOY50_RS17620 purD phosphoribosylamine--glycine ligase 0.56 JOY50_RS15880 pyrF orotidine-5'-phosphate decarboxylase — —
Pseudomonas putida KT2440 0.76 PP_4823 Phosphoribosylamine--glycine ligase 0.54 PP_1815 Orotidine 5'-phosphate decarboxylase — —
Pseudomonas aeruginosa PUPa3 0.75 NPBIFN_05164 purD Phosphoribosylamine--glycine ligase 0.58 NPBIFN_02136 pyrF orotidine-5'-phosphate decarboxylase — —
Pseudomonas aeruginosa MRSN321 0.75 PFGADD_05088 purD Phosphoribosylamine--glycine ligase 0.58 PFGADD_02097 pyrF orotidine-5'-phosphate decarboxylase 0.69 2
Pseudomonas sp. SVBP6 0.75 COO64_RS18300 purD phosphoribosylamine--glycine ligase 0.55 COO64_RS06575 pyrF orotidine-5'-phosphate decarboxylase 0.75 15
Pseudomonas aeruginosa PA14 0.75 IKLFDK_29285 Phosphoribosylamine--glycine ligase 0.58 IKLFDK_14615 orotidine-5'-phosphate decarboxylase — —
Pseudomonas sp. S08-1 0.75 OH686_07625 Phosphoribosylamine--glycine ligase 0.55 OH686_00580 Orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.56 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas stutzeri RCH2 0.75 Psest_1013 phosphoribosylamine--glycine ligase 0.57 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 — —
Pseudomonas fluorescens SBW25 0.75 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.58 PFLU_RS09110 orotidine-5'-phosphate decarboxylase — —
Pseudomonas protegens RBAN4 0.75 FABNJH_03450 purD Phosphoribosylamine--glycine ligase 0.58 FABNJH_09095 pyrF orotidine-5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_13645 phosphoribosylamine--glycine ligase 0.58 AO353_01670 orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.58 PFLU_RS09110 orotidine-5'-phosphate decarboxylase — —
Pseudomonas sp. DMC3 0.75 GFF3307 Phosphoribosylamine--glycine ligase 0.55 GFF4798 Orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_08230 phosphoribosylamine--glycine ligase 0.56 AO356_19850 orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.55 Pf1N1B4_514 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_4407 phosphoribosylamine--glycine ligase 0.56 Psyr_1836 orotidine-5'-phosphate decarboxylase — —
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_4407 phosphoribosylamine--glycine ligase 0.56 Psyr_1836 orotidine-5'-phosphate decarboxylase — —
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.57 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas orientalis W4I3 0.74 QF045_RS05965 phosphoribosylamine--glycine ligase 0.56 QF045_RS11745 orotidine-5'-phosphate decarboxylase — —
Pseudomonas sp. RS175 0.74 PFR28_05213 Phosphoribosylamine--glycine ligase 0.57 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 — —
Alteromonas macleodii MIT1002 0.73 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.62 MIT1002_02184 Orotidine 5'-phosphate decarboxylase low > 70
Pseudomonas simiae WCS417 0.73 PS417_02935 phosphoribosylamine--glycine ligase 0.56 PS417_09055 orotidine 5'-phosphate decarboxylase — —
Shewanella amazonensis SB2B 0.73 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.65 Sama_1740 orotidine 5'-phosphate decarboxylase (RefSeq) low > 62
Pseudomonas lactucae CFBP13502 0.72 GEMAOFIL_00819 Phosphoribosylamine--glycine ligase 0.56 GEMAOFIL_01940 'Orotidine 5'-phosphate decarboxylase' transl_table=11 — —
Pseudomonas segetis P6 0.72 ACVTMO_RS20375 purD phosphoribosylamine--glycine ligase 0.62 ACVTMO_RS09450 pyrF orotidine-5'-phosphate decarboxylase — —
Kangiella aquimarina DSM 16071 0.72 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.63 B158DRAFT_2331 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Shewanella oneidensis MR-1 0.71 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.64 SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) 0.86 46
Shewanella sp. ANA-3 0.71 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.64 Shewana3_1981 orotidine 5'-phosphate decarboxylase (RefSeq) 0.82 65
Shewanella loihica PV-4 0.69 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.66 Shew_1958 orotidine 5'-phosphate decarboxylase (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.27 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Acinetobacter baumannii LAC-4 0.66 RR41_RS06690 phosphoribosylamine--glycine ligase 0.54 RR41_RS12150 orotidine-5'-phosphate decarboxylase — —
Acinetobacter radioresistens SK82 0.65 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.55 MPMX26_01242 Orotidine 5'-phosphate decarboxylase 0.83 28
Methylophilus sp. DMC18 0.62 GFF1643 Phosphoribosylamine--glycine ligase 0.59 GFF737 Orotidine 5'-phosphate decarboxylase — —
Agrobacterium fabrum C58 0.57 Atu0647 phosphoribosylamine--glycine ligase 0.33 Atu0298 orotidine 5 0.91 12
Azospirillum sp. SherDot2 0.55 MPMX19_01630 Phosphoribosylamine--glycine ligase 0.33 MPMX19_02208 Orotidine 5'-phosphate decarboxylase — —
Rhizobium sp. OAE497 0.54 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.33 ABIE40_RS01345 orotidine-5'-phosphate decarboxylase — —
Azospirillum brasilense Sp245 0.54 AZOBR_RS04470 phosphoribosylamine--glycine ligase 0.37 AZOBR_RS03135 orotidine 5'-phosphate decarboxylase — —
Sinorhizobium meliloti 1021 0.53 SMc00993 phosphoribosylamine--glycine ligase 0.34 SMc00412 orotidine 5'-phosphate decarboxylase 0.90 44
Magnetospirillum magneticum AMB-1 0.53 AMB_RS01075 phosphoribosylamine--glycine ligase 0.35 AMB_RS20255 orotidine-5'-phosphate decarboxylase — —
Rhodopseudomonas palustris CGA009 0.52 TX73_005965 phosphoribosylamine--glycine ligase 0.32 TX73_001750 orotidine-5'-phosphate decarboxylase — —
Rhodospirillum rubrum S1H 0.50 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) 0.40 Rru_A3424 Orotidine-5'-phosphate decarboxylase (NCBI) — —
Desulfovibrio vulgaris Miyazaki F 0.50 DvMF_1722 phosphoribosylamine--glycine ligase (RefSeq) 0.38 DvMF_1137 orotidine 5'-phosphate decarboxylase (RefSeq) 0.80 12
Phaeobacter inhibens DSM 17395 0.50 PGA1_c23610 phosphoribosylamine--glycine ligase PurD 0.25 PGA1_c32450 orotidine 5'-phosphate decarboxylase PyrF 0.81 21
Desulfovibrio vulgaris Hildenborough JW710 0.49 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR) 0.35 DVU0901 pyrF orotidine 5`-phosphate decarboxylase (TIGR) — —
Bosea sp. OAE506 0.49 ABIE41_RS23160 phosphoribosylamine--glycine ligase 0.30 ABIE41_RS00050 orotidine-5'-phosphate decarboxylase 0.41 71
Sphingobium sp. HT1-2 0.48 GFF1053 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.35 GFF2243 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 — —
Xanthobacter sp. DMC5 0.47 GFF3581 Phosphoribosylamine--glycine ligase 0.29 GFF2226 Orotidine 5'-phosphate decarboxylase — —
Synechocystis sp000284455 PCC 6803 0.46 SGL_RS10950 phosphoribosylamine--glycine ligase 0.38 SGL_RS08270 orotidine-5'-phosphate decarboxylase — —
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.35 Ga0059261_0234 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Caulobacter crescentus NA1000 0.44 CCNA_00299 phosphoribosylamine--glycine ligase 0.26 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.87 12
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00299 phosphoribosylamine--glycine ligase 0.26 CCNA_00104 orotidine 5'-phosphate decarboxylase low > 67
Fusobacterium nucleatum SB010 0.44 HUW76_05205 phosphoribosylamine--glycine ligase 0.34 HUW76_08730 orotidine-5'-phosphate decarboxylase 0.94 26
Synechococcus elongatus PCC 7942 0.42 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase 0.32 Synpcc7942_2569 pyrF orotidine 5'-phosphate decarboxylase — —

Not shown: 38 genomes with orthologs for CSW01_01415 only; 0 genomes with orthologs for CSW01_09560 only