Conservation of cofitness between CSW01_01045 and CSW01_08685 in Vibrio cholerae E7946 ATCC 55056

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01045 DNA helicase RecQ 1.0 CSW01_08685 glycogen synthase 0.62 14
Klebsiella pneumoniae MKP103 0.67 KDGMDA_09735 ATP-dependent DNA helicase RecQ 0.26 KDGMDA_07085 glycogen synthase GlgA low > 95
Escherichia coli ECOR27 0.67 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ 0.26 NOLOHH_08690 glgA glycogen synthase GlgA low > 76
Escherichia coli ECRC99 0.67 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ 0.26 KEDOAH_11240 glgA glycogen synthase GlgA — —
Escherichia coli ECRC101 0.67 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ 0.26 MCAODC_07430 glgA glycogen synthase GlgA low > 87
Escherichia coli ECRC62 0.67 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ 0.26 BNILDI_02825 glgA glycogen synthase GlgA low > 75
Escherichia coli ECRC102 0.67 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ 0.26 NIAGMN_14670 glgA glycogen synthase GlgA low > 80
Escherichia coli ECRC100 0.67 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ 0.26 OKFHMN_16900 glgA glycogen synthase GlgA low > 79
Escherichia coli ECOR38 0.67 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ 0.26 HEPCGN_15715 glgA glycogen synthase GlgA low > 88
Escherichia coli ECRC98 0.67 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ 0.26 JDDGAC_20530 glgA glycogen synthase GlgA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ 0.26 OHPLBJKB_00272 Glycogen synthase low > 74
Escherichia fergusonii Becca 0.67 EFB2_04815 ATP-dependent DNA helicase RecQ 0.26 EFB2_00390 Glycogen synthase low > 86
Pantoea sp. MT58 0.67 IAI47_18360 ATP-dependent DNA helicase RecQ 0.27 IAI47_01695 glycogen synthase GlgA low > 76
Escherichia coli BW25113 0.67 b3822 recQ ATP-dependent DNA helicase (NCBI) 0.26 b3429 glgA glycogen synthase (NCBI) low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ 0.26 ECOLIN_RS19625 glycogen synthase GlgA low > 55
Escherichia coli BL21 0.66 ECD_03701 ATP-dependent DNA helicase 0.26 ECD_03281 glycogen synthase low > 61
Klebsiella michiganensis M5al 0.66 BWI76_RS01245 DNA helicase RecQ 0.26 BWI76_RS26200 starch synthase low > 92
Dickeya dianthicola 67-19 0.66 HGI48_RS20005 ATP-dependent DNA helicase RecQ 0.24 HGI48_RS19840 glycogen synthase GlgA low > 71
Serratia liquefaciens MT49 0.66 IAI46_00770 ATP-dependent DNA helicase RecQ 0.23 IAI46_23925 glycogen synthase GlgA low > 87
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS15340 ATP-dependent DNA helicase RecQ 0.27 PagCFBP13505_RS18210 glycogen synthase GlgA low > 74
Erwinia amylovora T8 0.66 OLJFJH_06445 ATP-dependent DNA helicase RecQ 0.25 OLJFJH_04245 glycogen synthase GlgA low > 58
Dickeya dianthicola ME23 0.66 DZA65_RS21045 ATP-dependent DNA helicase RecQ 0.24 DZA65_RS20915 glycogen synthase GlgA low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS19850 ATP-dependent DNA helicase RecQ 0.24 DDA3937_RS19730 glycogen synthase GlgA low > 74
Enterobacter asburiae PDN3 0.66 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ 0.26 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_04458 ATP-dependent DNA helicase RecQ 0.26 MPMX20_04311 Glycogen synthase low > 85
Rahnella sp. WP5 0.65 EX31_RS15210 ATP-dependent DNA helicase RecQ 0.26 EX31_RS05010 glycogen synthase GlgA low > 89
Pectobacterium carotovorum WPP14 0.65 HER17_RS01395 ATP-dependent DNA helicase RecQ 0.24 HER17_RS01500 glycogen synthase GlgA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF248 ATP-dependent DNA helicase RecQ 0.25 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 78
Shewanella sp. ANA-3 0.59 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) 0.15 Shewana3_2930 starch synthase catalytic subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) 0.14 SO1499 glgA glycogen synthase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.58 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.14 Shew_1172 starch synthase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.57 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) 0.15 Sama_2449 starch synthase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.54 MIT1002_00148 ATP-dependent DNA helicase RecQ 0.45 MIT1002_00235 Glycogen synthase low > 70
Pseudomonas sp. SVBP6 0.46 COO64_RS21845 recQ DNA helicase RecQ 0.23 COO64_RS24815 glgA glycogen synthase GlgA low > 93
Pseudomonas aeruginosa PA14 0.45 IKLFDK_17145 DNA helicase RecQ 0.22 IKLFDK_10595 glycogen synthase GlgA low > 98
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS00140 recQ;go_function=DNA DNA helicase RecQ 0.22 DY961_RS17085 glgA;go_function=glycogen glycogen synthase GlgA low > 100
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS40870 recQ;go_function=DNA DNA helicase RecQ 0.22 DQ20_RS39345 glgA;go_function=glycogen glycogen synthase GlgA low > 101
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.22 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 87
Marinobacter adhaerens HP15 0.45 HP15_1718 ATP-dependent DNA helicase RecQ 0.28 HP15_1713 glycogen/starch synthase, ADP-glucose type 0.54 60
Pseudomonas sp. RS175 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ 0.22 PFR28_02145 Glycogen synthase low > 88
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_04050 ATP-dependent DNA helicase RecQ 0.22 AO356_26025 glycogen synthase low > 104
Pseudomonas sp. S08-1 0.45 OH686_20670 ATP-dependent DNA helicase RecQ 0.23 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase low > 80
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ 0.22 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 103
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ 0.22 Pf1N1B4_4687 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.22 Psyr_2992 Starch (bacterial glycogen) synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.22 Psyr_2992 Starch (bacterial glycogen) synthase low > 86
Pseudomonas sp. DMC3 0.44 GFF2380 ATP-dependent DNA helicase RecQ 0.22 GFF3482 Glycogen synthase low > 89
Pseudomonas sp. BP01 0.44 JOY50_RS01155 recQ DNA helicase RecQ 0.22 JOY50_RS06710 glgA glycogen synthase GlgA low > 84
Pseudomonas putida KT2440 0.44 PP_4516 ATP-dependent DNA 3 0.22 PP_4050 glycogen synthase low > 96
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_18430 ATP-dependent DNA helicase RecQ 0.21 AO353_23775 glycogen synthase low > 101
Variovorax sp. OAS795 0.44 ABID97_RS03395 DNA helicase RecQ 0.25 ABID97_RS04535 glycogen synthase GlgA low > 91
Pseudomonas simiae WCS417 0.44 PS417_19950 ATP-dependent DNA helicase RecQ 0.21 PS417_14480 glycogen synthase low > 88
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS21920 DNA helicase RecQ 0.21 PFLU_RS16410 glycogen synthase GlgA 0.22 103
Pseudomonas orientalis W4I3 0.44 QF045_RS22070 DNA helicase RecQ 0.22 QF045_RS15315 glycogen synthase GlgA low > 93
Pseudomonas lactucae CFBP13502 0.44 GEMAOFIL_04187 ATP-dependent DNA helicase RecQ 0.21 GEMAOFIL_03185 Glycogen synthase low > 96
Pseudomonas fluorescens SBW25 0.44 PFLU_RS21920 DNA helicase RecQ 0.21 PFLU_RS16410 glycogen synthase GlgA 0.53 5
Pseudomonas stutzeri RCH2 0.44 Psest_1869 ATP-dependent DNA helicase RecQ 0.22 Psest_2172 glycogen/starch synthases, ADP-glucose type low > 67
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.22 HSERO_RS12515 glycogen synthase low > 78
Agrobacterium fabrum C58 0.44 Atu0061 ATP-dependent DNA helicase 0.26 Atu5285 glycogen synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ 0.23 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 74
Methylophilus sp. DMC18 0.43 GFF2139 ATP-dependent DNA helicase RecQ 0.27 GFF1174 Glycogen synthase low > 43
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS28295 DNA helicase RecQ 0.29 QEN71_RS23430 glycogen synthase GlgA low > 153
Magnetospirillum magneticum AMB-1 0.43 AMB_RS21505 DNA helicase RecQ 0.25 AMB_RS10650 glycogen synthase — —
Paraburkholderia graminis OAS925 0.43 ABIE53_003792 ATP-dependent DNA helicase RecQ 0.26 ABIE53_001742 starch synthase low > 113
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS18145 ATP-dependent DNA helicase RecQ 0.28 BPHYT_RS07615 glycogen synthase low > 109
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS02880 DNA helicase RecQ 0.25 ABZR87_RS17230 glycogen synthase GlgA low > 80
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS20865 DNA helicase RecQ 0.23 ABZR88_RS18980 glycogen synthase low > 71
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_06595 ATP-dependent DNA helicase RecQ 0.28 H281DRAFT_04861 starch synthase — —
Ralstonia solanacearum GMI1000 0.42 RS_RS15155 DNA helicase RecQ 0.24 RS_RS18320 glycogen synthase low > 80
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10025 DNA helicase RecQ 0.24 RPSI07_RS00900 glycogen synthase GlgA low > 81
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS07220 DNA helicase RecQ 0.24 RALBFv3_RS22290 glycogen synthase GlgA low > 76
Ralstonia solanacearum UW163 0.42 UW163_RS06400 DNA helicase RecQ 0.24 UW163_RS22835 glycogen synthase GlgA — —
Azospirillum brasilense Sp245 0.42 AZOBR_RS02840 ATP-dependent DNA helicase RecQ 0.27 AZOBR_RS00855 glycogen synthase — —
Sinorhizobium meliloti 1021 0.42 SMc01566 ATP-dependent DNA helicase 0.25 SMc03924 glycogen synthase low > 103
Variovorax sp. SCN45 0.42 GFF6415 ATP-dependent DNA helicase RecQ 0.25 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 127
Rhodopseudomonas palustris CGA009 0.41 TX73_025080 DNA helicase RecQ 0.24 TX73_001985 glycogen synthase GlgA low > 86
Bosea sp. OAE506 0.41 ABIE41_RS04160 DNA helicase RecQ 0.20 ABIE41_RS13060 glycogen synthase GlgA low > 77
Azospirillum sp. SherDot2 0.41 MPMX19_00123 ATP-dependent DNA helicase RecQ 0.26 MPMX19_02225 Glycogen synthase — —
Rhodospirillum rubrum S1H 0.40 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) 0.29 Rru_A2245 Glycogen/starch synthases, ADP-glucose type (NCBI) — —
Cellulophaga baltica 18 0.39 M666_RS16920 DNA helicase RecQ 0.15 M666_RS00870 glycogen/starch synthase low > 67
Sphingobium sp. HT1-2 0.38 GFF798 ATP-dependent DNA helicase RecQ 0.23 GFF2034 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 95
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS08905 DNA helicase RecQ 0.24 CA265_RS04140 glycogen synthase 0.43 67
Fusobacterium nucleatum SB010 0.35 HUW76_07235 DNA helicase RecQ 0.25 HUW76_05855 glycogen synthase low > 35

Not shown: 31 genomes with orthologs for CSW01_01045 only; 6 genomes with orthologs for CSW01_08685 only