Conservation of cofitness between CSW01_02775 and CSW01_05825 in Vibrio cholerae E7946 ATCC 55056

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02775 glycerol-3-phosphate acyltransferase 1.0 CSW01_05825 transcriptional regulator HexR 0.63 11
Serratia liquefaciens MT49 0.65 IAI46_22090 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.78 IAI46_14580 MurR/RpiR family transcriptional regulator low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3173 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.72 GFF1632 Phosphogluconate repressor HexR, RpiR family low > 78
Pectobacterium carotovorum WPP14 0.64 HER17_RS04005 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.77 HER17_RS11785 MurR/RpiR family transcriptional regulator low > 75
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS11890 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 PagCFBP13505_RS02370 transcriptional regulator HexR low > 74
Pantoea sp. MT58 0.63 IAI47_03070 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.63 IAI47_08490 MurR/RpiR family transcriptional regulator low > 76
Rahnella sp. WP5 0.63 EX31_RS08175 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.76 EX31_RS10635 MurR/RpiR family transcriptional regulator low > 89
Klebsiella pneumoniae MKP103 0.63 KDGMDA_05300 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.72 KDGMDA_25375 transcriptional regulator HexR low > 95
Escherichia coli ECRC100 0.63 OKFHMN_18695 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.73 OKFHMN_26325 hexR DNA-binding transcriptional regulator HexR low > 79
Escherichia coli ECRC101 0.63 MCAODC_09210 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.73 MCAODC_19080 hexR DNA-binding transcriptional regulator HexR low > 87
Escherichia coli BW25113 0.63 b3059 ygiH hypothetical protein (NCBI) 0.73 b1853 yebK predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia fergusonii Becca 0.63 EFB2_00752 putative glycerol-3-phosphate acyltransferase 0.73 EFB2_02089 HTH-type transcriptional regulator HexR low > 86
Escherichia coli Nissle 1917 0.63 ECOLIN_RS17665 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.73 ECOLIN_RS10325 DNA-binding transcriptional regulator HexR low > 55
Escherichia coli ECRC62 0.63 BNILDI_01030 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.73 BNILDI_15635 hexR DNA-binding transcriptional regulator HexR low > 75
Escherichia coli ECRC98 0.63 JDDGAC_22330 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.73 JDDGAC_00900 hexR DNA-binding transcriptional regulator HexR low > 87
Escherichia coli ECRC99 0.63 KEDOAH_09450 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.73 KEDOAH_01780 hexR DNA-binding transcriptional regulator HexR
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_00645 putative glycerol-3-phosphate acyltransferase 0.73 OHPLBJKB_01875 HTH-type transcriptional regulator HexR low > 74
Escherichia coli BL21 0.63 ECD_02929 putative glycerol-3-phosphate acyltransferase 0.73 ECD_01824 putative DNA-binding transcriptional regulator low > 61
Escherichia coli ECOR38 0.63 HEPCGN_17550 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.73 HEPCGN_04730 hexR DNA-binding transcriptional regulator HexR low > 88
Enterobacter sp. TBS_079 0.63 MPMX20_03896 putative glycerol-3-phosphate acyltransferase 0.74 MPMX20_02758 HTH-type transcriptional regulator HexR low > 85
Escherichia coli ECRC102 0.63 NIAGMN_16460 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.73 NIAGMN_01735 hexR DNA-binding transcriptional regulator HexR low > 80
Escherichia coli ECOR27 0.63 NOLOHH_10485 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.73 NOLOHH_16840 hexR DNA-binding transcriptional regulator HexR low > 76
Enterobacter asburiae PDN3 0.63 EX28DRAFT_3087 acyl-phosphate glycerol 3-phosphate acyltransferase 0.74 EX28DRAFT_0703 transcriptional regulator, RpiR family low > 76
Dickeya dianthicola ME23 0.63 DZA65_RS18270 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.75 DZA65_RS10575 MurR/RpiR family transcriptional regulator low > 75
Dickeya dadantii 3937 0.62 DDA3937_RS17135 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.75 DDA3937_RS10130 MurR/RpiR family transcriptional regulator 0.55 1
Erwinia tracheiphila SCR3 0.62 LU632_RS20705 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.64 LU632_RS13365 MurR/RpiR family transcriptional regulator low > 73
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_14355 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.64 IJEDHG_22185 transcriptional regulator HexR low > 61
Dickeya dianthicola 67-19 0.62 HGI48_RS17185 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.75 HGI48_RS10160 MurR/RpiR family transcriptional regulator low > 71
Klebsiella michiganensis M5al 0.61 BWI76_RS24490 glycerol-3-phosphate acyltransferase 0.72 BWI76_RS18110 transcriptional regulator HexR low > 92
Shewanella loihica PV-4 0.59 Shew_1001 putative glycerol-3-phosphate acyltransferase PlsY (RefSeq) 0.78 Shew_2049 DNA-binding transcriptional regulator HexR (RefSeq) low > 60
Shewanella oneidensis MR-1 0.59 SO1290 conserved hypothetical protein TIGR00023 (NCBI ptt file) 0.77 SO2490 transcriptional regulator, RpiR family (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.58 MIT1002_00740 G3P acyltransferase 0.73 MIT1002_02408 putative HTH-type transcriptional regulator YbbH
Shewanella sp. ANA-3 0.58 Shewana3_3082 putative glycerol-3-phosphate acyltransferase PlsY (RefSeq) 0.77 Shewana3_2152 DNA-binding transcriptional regulator HexR (RefSeq) low > 73
Shewanella amazonensis SB2B 0.53 Sama_0828 putative glycerol-3-phosphate acyltransferase PlsY (RefSeq) 0.77 Sama_1813 DNA-binding transcriptional regulator HexR (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS03335 glycerol-3-phosphate acyltransferase 0.34 RR42_RS06120 transcriptional regulator
Acidovorax sp. GW101-3H11 0.42 Ac3H11_2623 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.34 Ac3H11_2055 Probable transcriptional regulator
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF289 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.33 GFF1364 Phosphogluconate repressor HexR, RpiR family
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS00805 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.22 ABZR87_RS03145 MurR/RpiR family transcriptional regulator
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS05150 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.22 RALBFv3_RS18180 MurR/RpiR family transcriptional regulator
Ralstonia solanacearum UW163 0.40 UW163_RS08475 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.22 UW163_RS20950 MurR/RpiR family transcriptional regulator
Ralstonia solanacearum GMI1000 0.40 RS_RS12765 glycerol-3-phosphate acyltransferase 0.23 RS_RS22855 MurR/RpiR family transcriptional regulator
Ralstonia solanacearum PSI07 0.39 RPSI07_RS12150 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.22 RPSI07_RS05455 MurR/RpiR family transcriptional regulator
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS02770 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.30 QEN71_RS26925 MurR/RpiR family transcriptional regulator
Castellaniella sp019104865 MT123 0.36 ABCV34_RS03025 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.39 ABCV34_RS08655 SIS domain-containing protein
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS04275 glycerol-3-phosphate acyltransferase 0.32 HSERO_RS05505 transcriptional regulator
Pseudomonas sp. BP01 0.35 JOY50_RS18090 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.57 JOY50_RS11445 hexR DNA-binding transcriptional regulator HexR low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4637 acyl-phosphate glycerol-3-phosphate acyltransferase 0.56 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) low > 86
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4637 acyl-phosphate glycerol-3-phosphate acyltransferase 0.56 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) low > 86
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04123 acyl-phosphate glycerol-3-phosphate acyltransferase 0.33 H281DRAFT_04279 transcriptional regulator, RpiR family
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS15935 glycerol-3-phosphate acyltransferase 0.34 BPHYT_RS16740 transcriptional regulator
Pseudomonas segetis P6 0.34 ACVTMO_RS04300 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.57 ACVTMO_RS14030 MurR/RpiR family transcriptional regulator low > 75
Paraburkholderia graminis OAS925 0.34 ABIE53_003358 glycerol-3-phosphate acyltransferase PlsY 0.35 ABIE53_003518 RpiR family carbohydrate utilization transcriptional regulator
Variovorax sp. SCN45 0.33 GFF3102 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY (EC 2.3.1.n3) 0.20 GFF6715 Transcriptional regulator of RpiR family in catabolic operon
Variovorax sp. OAS795 0.33 ABID97_RS21700 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.20 ABID97_RS22860 MurR/RpiR family transcriptional regulator
Pseudomonas sp. RS175 0.33 PFR28_04074 Glycerol-3-phosphate acyltransferase 0.57 PFR28_00572 HTH-type transcriptional regulator HexR low > 88
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1190 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.57 PfGW456L13_1900 Phosphogluconate repressor HexR, RpiR family low > 87
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_07365 glycerol-3-phosphate acyltransferase 0.57 AO353_03365 transcriptional regulator low > 101
Pseudomonas sp. SVBP6 0.33 COO64_RS22560 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.58 COO64_RS04585 hexR DNA-binding transcriptional regulator HexR low > 93
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_14285 glycerol-3-phosphate acyltransferase 0.57 AO356_05165 transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2517 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.57 Pf1N1B4_590 Phosphogluconate repressor HexR, RpiR family low > 87
Pseudomonas aeruginosa PA14 0.32 IKLFDK_22505 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.55 IKLFDK_16180 HTH-type transcriptional regulator HexR low > 98
Pseudomonas aeruginosa PUPa3 0.32 DQ20_RS36415 plsY;go_component=plasma glycerol-3-phosphate 1-O-acyltransferase PlsY 0.55 DQ20_RS34520 MurR/RpiR family transcriptional regulator low > 101
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_05292 Glycerol-3-phosphate acyltransferase 0.57 GEMAOFIL_04559 HTH-type transcriptional regulator HexR low > 96
Pseudomonas aeruginosa MRSN321 0.32 DY961_RS22930 plsY;go_component=plasma glycerol-3-phosphate 1-O-acyltransferase PlsY 0.55 DY961_RS01015 MurR/RpiR family transcriptional regulator low > 100
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4795 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.57 Pf6N2E2_2886 Phosphogluconate repressor HexR, RpiR family low > 103
Pseudomonas sp. DMC3 0.32 GFF47 Glycerol-3-phosphate acyltransferase 0.58 GFF5141 HTH-type transcriptional regulator HexR low > 89
Pseudomonas simiae WCS417 0.32 PS417_25860 glycerol-3-phosphate acyltransferase 0.57 PS417_22115 transcriptional regulator low > 88
Marinobacter adhaerens HP15 0.32 HP15_319 predicted membrane protein 0.55 HP15_2180 transcriptional regulator, RpiR family protein low > 73
Pseudomonas orientalis W4I3 0.32 QF045_RS00260 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.57 QF045_RS24250 MurR/RpiR family transcriptional regulator low > 93
Pseudomonas fluorescens SBW25 0.31 PFLU_RS27515 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.57 PFLU_RS23730 MurR/RpiR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS27515 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.57 PFLU_RS23730 MurR/RpiR family transcriptional regulator low > 109
Pseudomonas putida KT2440 0.31 PP_0391 Glycerol-3-phosphate acyltransferase 0.57 PP_1021 DNA-binding transcriptional regulator low > 96
Pseudomonas stutzeri RCH2 0.31 Psest_3678 acyl-phosphate glycerol 3-phosphate acyltransferase 0.57 Psest_0851 Transcriptional regulators low > 67
Rhizobium sp. OAE497 0.29 ABIE40_RS07370 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.25 ABIE40_RS21410 MurR/RpiR family transcriptional regulator
Sinorhizobium meliloti 1021 0.29 SMc01362 glycerol-3-phosphate acyltransferase PlsY 0.38 SMc02460 hypothetical protein
Azospirillum sp. SherDot2 0.29 MPMX19_01052 Glycerol-3-phosphate acyltransferase 0.33 MPMX19_05117 HTH-type transcriptional regulator HexR
Phaeobacter inhibens DSM 17395 0.29 PGA1_c03010 glycerol-3-phosphate acyltransferase PlsY 0.10 PGA1_c27130 putative HTH-type transcriptional regulator
Agrobacterium fabrum C58 0.27 Atu1306 hypothetical protein 0.25 Atu2598 transcriptional regulator, RpiR family
Pseudomonas sp. S08-1 0.26 OH686_14990 acyl-phosphate glycerol 3-phosphate acyltransferase 0.58 OH686_02440 Phosphogluconate repressor HexR, RpiR family low > 80

Not shown: 21 genomes with orthologs for CSW01_02775 only; 1 genomes with orthologs for CSW01_05825 only