| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_02775 | | glycerol-3-phosphate acyltransferase | 1.0 | CSW01_05825 | | transcriptional regulator HexR | 0.63 | 11 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_22090 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.78 | IAI46_14580 | | MurR/RpiR family transcriptional regulator | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.64 | GFF3173 | | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY | 0.72 | GFF1632 | | Phosphogluconate repressor HexR, RpiR family | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.64 | HER17_RS04005 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.77 | HER17_RS11785 | | MurR/RpiR family transcriptional regulator | low | > 75 |
| Pantoea agglomerans CFBP13505 P0401 | 0.64 | PagCFBP13505_RS11890 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.61 | PagCFBP13505_RS02370 | | transcriptional regulator HexR | low | > 74 |
| Pantoea sp. MT58 | 0.63 | IAI47_03070 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.63 | IAI47_08490 | | MurR/RpiR family transcriptional regulator | low | > 76 |
| Rahnella sp. WP5 | 0.63 | EX31_RS08175 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.76 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | low | > 89 |
| Klebsiella pneumoniae MKP103 | 0.63 | KDGMDA_05300 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.72 | KDGMDA_25375 | | transcriptional regulator HexR | low | > 95 |
| Escherichia coli ECRC100 | 0.63 | OKFHMN_18695 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.73 | OKFHMN_26325 | hexR | DNA-binding transcriptional regulator HexR | low | > 79 |
| Escherichia coli ECRC101 | 0.63 | MCAODC_09210 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.73 | MCAODC_19080 | hexR | DNA-binding transcriptional regulator HexR | low | > 87 |
| Escherichia coli BW25113 | 0.63 | b3059 | ygiH | hypothetical protein (NCBI) | 0.73 | b1853 | yebK | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.63 | EFB2_00752 | | putative glycerol-3-phosphate acyltransferase | 0.73 | EFB2_02089 | | HTH-type transcriptional regulator HexR | low | > 86 |
| Escherichia coli Nissle 1917 | 0.63 | ECOLIN_RS17665 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.73 | ECOLIN_RS10325 | | DNA-binding transcriptional regulator HexR | low | > 55 |
| Escherichia coli ECRC62 | 0.63 | BNILDI_01030 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.73 | BNILDI_15635 | hexR | DNA-binding transcriptional regulator HexR | low | > 75 |
| Escherichia coli ECRC98 | 0.63 | JDDGAC_22330 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.73 | JDDGAC_00900 | hexR | DNA-binding transcriptional regulator HexR | low | > 87 |
| Escherichia coli ECRC99 | 0.63 | KEDOAH_09450 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.73 | KEDOAH_01780 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.63 | OHPLBJKB_00645 | | putative glycerol-3-phosphate acyltransferase | 0.73 | OHPLBJKB_01875 | | HTH-type transcriptional regulator HexR | low | > 74 |
| Escherichia coli BL21 | 0.63 | ECD_02929 | | putative glycerol-3-phosphate acyltransferase | 0.73 | ECD_01824 | | putative DNA-binding transcriptional regulator | low | > 61 |
| Escherichia coli ECOR38 | 0.63 | HEPCGN_17550 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.73 | HEPCGN_04730 | hexR | DNA-binding transcriptional regulator HexR | low | > 88 |
| Enterobacter sp. TBS_079 | 0.63 | MPMX20_03896 | | putative glycerol-3-phosphate acyltransferase | 0.74 | MPMX20_02758 | | HTH-type transcriptional regulator HexR | low | > 85 |
| Escherichia coli ECRC102 | 0.63 | NIAGMN_16460 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.73 | NIAGMN_01735 | hexR | DNA-binding transcriptional regulator HexR | low | > 80 |
| Escherichia coli ECOR27 | 0.63 | NOLOHH_10485 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.73 | NOLOHH_16840 | hexR | DNA-binding transcriptional regulator HexR | low | > 76 |
| Enterobacter asburiae PDN3 | 0.63 | EX28DRAFT_3087 | | acyl-phosphate glycerol 3-phosphate acyltransferase | 0.74 | EX28DRAFT_0703 | | transcriptional regulator, RpiR family | low | > 76 |
| Dickeya dianthicola ME23 | 0.63 | DZA65_RS18270 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.75 | DZA65_RS10575 | | MurR/RpiR family transcriptional regulator | low | > 75 |
| Dickeya dadantii 3937 | 0.62 | DDA3937_RS17135 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.75 | DDA3937_RS10130 | | MurR/RpiR family transcriptional regulator | 0.55 | 1 |
| Erwinia tracheiphila SCR3 | 0.62 | LU632_RS20705 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.64 | LU632_RS13365 | | MurR/RpiR family transcriptional regulator | low | > 73 |
| Erwinia tracheiphila HP pepo 2.2 | 0.62 | IJEDHG_14355 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.64 | IJEDHG_22185 | | transcriptional regulator HexR | low | > 61 |
| Dickeya dianthicola 67-19 | 0.62 | HGI48_RS17185 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.75 | HGI48_RS10160 | | MurR/RpiR family transcriptional regulator | low | > 71 |
| Klebsiella michiganensis M5al | 0.61 | BWI76_RS24490 | | glycerol-3-phosphate acyltransferase | 0.72 | BWI76_RS18110 | | transcriptional regulator HexR | low | > 92 |
| Shewanella loihica PV-4 | 0.59 | Shew_1001 | | putative glycerol-3-phosphate acyltransferase PlsY (RefSeq) | 0.78 | Shew_2049 | | DNA-binding transcriptional regulator HexR (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.59 | SO1290 | | conserved hypothetical protein TIGR00023 (NCBI ptt file) | 0.77 | SO2490 | | transcriptional regulator, RpiR family (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.58 | MIT1002_00740 | | G3P acyltransferase | 0.73 | MIT1002_02408 | | putative HTH-type transcriptional regulator YbbH | — | — |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_3082 | | putative glycerol-3-phosphate acyltransferase PlsY (RefSeq) | 0.77 | Shewana3_2152 | | DNA-binding transcriptional regulator HexR (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.53 | Sama_0828 | | putative glycerol-3-phosphate acyltransferase PlsY (RefSeq) | 0.77 | Sama_1813 | | DNA-binding transcriptional regulator HexR (RefSeq) | low | > 62 |
| Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS03335 | | glycerol-3-phosphate acyltransferase | 0.34 | RR42_RS06120 | | transcriptional regulator | — | — |
| Acidovorax sp. GW101-3H11 | 0.42 | Ac3H11_2623 | | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY | 0.34 | Ac3H11_2055 | | Probable transcriptional regulator | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF289 | | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY | 0.33 | GFF1364 | | Phosphogluconate repressor HexR, RpiR family | — | — |
| Ralstonia sp. UNC404CL21Col | 0.41 | ABZR87_RS00805 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.22 | ABZR87_RS03145 | | MurR/RpiR family transcriptional regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS05150 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.22 | RALBFv3_RS18180 | | MurR/RpiR family transcriptional regulator | — | — |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS08475 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.22 | UW163_RS20950 | | MurR/RpiR family transcriptional regulator | — | — |
| Ralstonia solanacearum GMI1000 | 0.40 | RS_RS12765 | | glycerol-3-phosphate acyltransferase | 0.23 | RS_RS22855 | | MurR/RpiR family transcriptional regulator | — | — |
| Ralstonia solanacearum PSI07 | 0.39 | RPSI07_RS12150 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.22 | RPSI07_RS05455 | | MurR/RpiR family transcriptional regulator | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS02770 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.30 | QEN71_RS26925 | | MurR/RpiR family transcriptional regulator | — | — |
| Castellaniella sp019104865 MT123 | 0.36 | ABCV34_RS03025 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.39 | ABCV34_RS08655 | | SIS domain-containing protein | — | — |
| Herbaspirillum seropedicae SmR1 | 0.36 | HSERO_RS04275 | | glycerol-3-phosphate acyltransferase | 0.32 | HSERO_RS05505 | | transcriptional regulator | — | — |
| Pseudomonas sp. BP01 | 0.35 | JOY50_RS18090 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.57 | JOY50_RS11445 | hexR | DNA-binding transcriptional regulator HexR | low | > 84 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.35 | Psyr_4637 | | acyl-phosphate glycerol-3-phosphate acyltransferase | 0.56 | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.35 | Psyr_4637 | | acyl-phosphate glycerol-3-phosphate acyltransferase | 0.56 | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | low | > 86 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_04123 | | acyl-phosphate glycerol-3-phosphate acyltransferase | 0.33 | H281DRAFT_04279 | | transcriptional regulator, RpiR family | — | — |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS15935 | | glycerol-3-phosphate acyltransferase | 0.34 | BPHYT_RS16740 | | transcriptional regulator | — | — |
| Pseudomonas segetis P6 | 0.34 | ACVTMO_RS04300 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.57 | ACVTMO_RS14030 | | MurR/RpiR family transcriptional regulator | low | > 75 |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_003358 | | glycerol-3-phosphate acyltransferase PlsY | 0.35 | ABIE53_003518 | | RpiR family carbohydrate utilization transcriptional regulator | — | — |
| Variovorax sp. SCN45 | 0.33 | GFF3102 | | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY (EC 2.3.1.n3) | 0.20 | GFF6715 | | Transcriptional regulator of RpiR family in catabolic operon | — | — |
| Variovorax sp. OAS795 | 0.33 | ABID97_RS21700 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.20 | ABID97_RS22860 | | MurR/RpiR family transcriptional regulator | — | — |
| Pseudomonas sp. RS175 | 0.33 | PFR28_04074 | | Glycerol-3-phosphate acyltransferase | 0.57 | PFR28_00572 | | HTH-type transcriptional regulator HexR | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.33 | PfGW456L13_1190 | | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY | 0.57 | PfGW456L13_1900 | | Phosphogluconate repressor HexR, RpiR family | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.33 | AO353_07365 | | glycerol-3-phosphate acyltransferase | 0.57 | AO353_03365 | | transcriptional regulator | low | > 101 |
| Pseudomonas sp. SVBP6 | 0.33 | COO64_RS22560 | plsY | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.58 | COO64_RS04585 | hexR | DNA-binding transcriptional regulator HexR | low | > 93 |
| Pseudomonas fluorescens FW300-N2C3 | 0.33 | AO356_14285 | | glycerol-3-phosphate acyltransferase | 0.57 | AO356_05165 | | transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_2517 | | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY | 0.57 | Pf1N1B4_590 | | Phosphogluconate repressor HexR, RpiR family | low | > 87 |
| Pseudomonas aeruginosa PA14 | 0.32 | IKLFDK_22505 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.55 | IKLFDK_16180 | | HTH-type transcriptional regulator HexR | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.32 | DQ20_RS36415 | plsY;go_component=plasma | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.55 | DQ20_RS34520 | | MurR/RpiR family transcriptional regulator | low | > 101 |
| Pseudomonas lactucae CFBP13502 | 0.32 | GEMAOFIL_05292 | | Glycerol-3-phosphate acyltransferase | 0.57 | GEMAOFIL_04559 | | HTH-type transcriptional regulator HexR | low | > 96 |
| Pseudomonas aeruginosa MRSN321 | 0.32 | DY961_RS22930 | plsY;go_component=plasma | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.55 | DY961_RS01015 | | MurR/RpiR family transcriptional regulator | low | > 100 |
| Pseudomonas fluorescens FW300-N2E2 | 0.32 | Pf6N2E2_4795 | | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY | 0.57 | Pf6N2E2_2886 | | Phosphogluconate repressor HexR, RpiR family | low | > 103 |
| Pseudomonas sp. DMC3 | 0.32 | GFF47 | | Glycerol-3-phosphate acyltransferase | 0.58 | GFF5141 | | HTH-type transcriptional regulator HexR | low | > 89 |
| Pseudomonas simiae WCS417 | 0.32 | PS417_25860 | | glycerol-3-phosphate acyltransferase | 0.57 | PS417_22115 | | transcriptional regulator | low | > 88 |
| Marinobacter adhaerens HP15 | 0.32 | HP15_319 | | predicted membrane protein | 0.55 | HP15_2180 | | transcriptional regulator, RpiR family protein | low | > 73 |
| Pseudomonas orientalis W4I3 | 0.32 | QF045_RS00260 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.57 | QF045_RS24250 | | MurR/RpiR family transcriptional regulator | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.31 | PFLU_RS27515 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.57 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.31 | PFLU_RS27515 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.57 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | low | > 109 |
| Pseudomonas putida KT2440 | 0.31 | PP_0391 | | Glycerol-3-phosphate acyltransferase | 0.57 | PP_1021 | | DNA-binding transcriptional regulator | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.31 | Psest_3678 | | acyl-phosphate glycerol 3-phosphate acyltransferase | 0.57 | Psest_0851 | | Transcriptional regulators | low | > 67 |
| Rhizobium sp. OAE497 | 0.29 | ABIE40_RS07370 | | glycerol-3-phosphate 1-O-acyltransferase PlsY | 0.25 | ABIE40_RS21410 | | MurR/RpiR family transcriptional regulator | — | — |
| Sinorhizobium meliloti 1021 | 0.29 | SMc01362 | | glycerol-3-phosphate acyltransferase PlsY | 0.38 | SMc02460 | | hypothetical protein | — | — |
| Azospirillum sp. SherDot2 | 0.29 | MPMX19_01052 | | Glycerol-3-phosphate acyltransferase | 0.33 | MPMX19_05117 | | HTH-type transcriptional regulator HexR | — | — |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c03010 | | glycerol-3-phosphate acyltransferase PlsY | 0.10 | PGA1_c27130 | | putative HTH-type transcriptional regulator | — | — |
| Agrobacterium fabrum C58 | 0.27 | Atu1306 | | hypothetical protein | 0.25 | Atu2598 | | transcriptional regulator, RpiR family | — | — |
| Pseudomonas sp. S08-1 | 0.26 | OH686_14990 | | acyl-phosphate glycerol 3-phosphate acyltransferase | 0.58 | OH686_02440 | | Phosphogluconate repressor HexR, RpiR family | low | > 80 |
Not shown: 21 genomes with orthologs for CSW01_02775 only; 1 genomes with orthologs for CSW01_05825 only