| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_04590 | | transcriptional regulator GcvA | 1.0 | CSW01_04640 | | methionine ABC transporter permease | 0.55 | 18 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.73 | GFF4865 | | Glycine cleavage system transcriptional activator GcvA | 0.47 | GFF22 | | Methionine ABC transporter permease protein | low | > 78 |
| Rahnella sp. WP5 | 0.72 | EX31_RS13110 | | transcriptional regulator GcvA | 0.46 | EX31_RS12885 | | methionine ABC transporter permease MetI | low | > 89 |
| Serratia liquefaciens MT49 | 0.72 | IAI46_20340 | | transcriptional regulator GcvA | 0.45 | IAI46_20080 | | methionine ABC transporter permease MetI | low | > 87 |
| Erwinia amylovora T8 | 0.72 | OLJFJH_09170 | | Glycine cleavage system transcriptional activator | 0.45 | OLJFJH_00485 | | D-methionine transport system permease protein MetI | low | > 58 |
| Escherichia coli ECRC100 | 0.72 | OKFHMN_20120 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.45 | OKFHMN_10055 | metI | D-methionine transport system permease protein MetI | low | > 79 |
| Escherichia fergusonii Becca | 0.72 | EFB2_01109 | | Glycine cleavage system transcriptional activator | 0.45 | EFB2_03845 | | D-methionine transport system permease protein MetI | low | > 86 |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_17890 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.45 | NIAGMN_07905 | metI | D-methionine transport system permease protein MetI | low | > 80 |
| Escherichia coli BW25113 | 0.72 | b2808 | gcvA | DNA-binding transcriptional dual regulator (NCBI) | 0.45 | b0198 | metI | DL-methionine transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_23785 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.45 | JDDGAC_13650 | metI | D-methionine transport system permease protein MetI | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_00923 | | Glycine cleavage system transcriptional activator | 0.45 | OHPLBJKB_03463 | | D-methionine transport system permease protein MetI | low | > 74 |
| Escherichia coli ECRC101 | 0.72 | MCAODC_10645 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.45 | MCAODC_00570 | metI | D-methionine transport system permease protein MetI | low | > 87 |
| Escherichia coli BL21 | 0.72 | ECD_02659 | | glycine cleavage system transcriptional activator; autorepressor | 0.45 | ECD_00197 | | DL-methionine transporter subunit | low | > 61 |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_19375 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.45 | HEPCGN_07995 | metI | D-methionine transport system permease protein MetI | low | > 88 |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS15650 | | glycine cleavage system transcriptional regulator GcvA | 0.45 | ECOLIN_RS01090 | | methionine ABC transporter permease MetI | low | > 55 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_10505 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.45 | BNILDI_09270 | metI | D-methionine transport system permease protein MetI | low | > 75 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_08010 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.45 | KEDOAH_18100 | metI | D-methionine transport system permease protein MetI | — | — |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_12000 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.45 | NOLOHH_02400 | metI | D-methionine transport system permease protein MetI | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS06255 | | transcriptional regulator GcvA | 0.42 | LU632_RS19825 | | methionine ABC transporter permease MetI | low | > 73 |
| Erwinia tracheiphila HP pepo 2.2 | 0.71 | IJEDHG_17275 | gcvA | Glycine cleavage system transcriptional activator | 0.42 | IJEDHG_15320 | | DL-methionine transporter permease subunit | low | > 61 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_03671 | | Glycine cleavage system transcriptional activator | 0.47 | MPMX20_00882 | | D-methionine transport system permease protein MetI | low | > 85 |
| Pantoea agglomerans CFBP13505 P0401 | 0.71 | PagCFBP13516_RS04295 | | transcriptional regulator GcvA | 0.47 | PagCFBP13516_RS15705 | | methionine ABC transporter permease MetI | low | > 80 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS22955 | | transcriptional regulator GcvA | 0.46 | BWI76_RS05360 | | methionine ABC transporter permease | 0.24 | 34 |
| Pantoea sp. MT58 | 0.71 | IAI47_04025 | | transcriptional regulator GcvA | 0.47 | IAI47_20550 | | ABC transporter permease | low | > 76 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS05050 | | transcriptional regulator GcvA | 0.46 | DDA3937_RS16850 | | methionine ABC transporter permease MetI | low | > 74 |
| Dickeya dianthicola ME23 | 0.71 | DZA65_RS05390 | | transcriptional regulator GcvA | 0.46 | DZA65_RS17995 | | methionine ABC transporter permease MetI | low | > 75 |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_2883 | | Transcriptional regulator | 0.47 | EX28DRAFT_3786 | | ABC-type metal ion transport system, permease component | low | > 76 |
| Dickeya dianthicola 67-19 | 0.71 | HGI48_RS05050 | | transcriptional regulator GcvA | 0.46 | HGI48_RS16920 | | methionine ABC transporter permease MetI | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.71 | HER17_RS16415 | | transcriptional regulator GcvA | 0.46 | HER17_RS04375 | | methionine ABC transporter permease MetI | low | > 75 |
| Klebsiella pneumoniae MKP103 | 0.63 | KDGMDA_03515 | | Glycine cleavage system transcriptional activator | 0.47 | KDGMDA_13610 | | D-methionine transport system permease protein MetI | low | > 94 |
| Klebsiella pneumoniae MRSN742743 | 0.63 | GJGHJB_00939 | gcvA | Glycine cleavage system transcriptional activator | 0.47 | GJGHJB_04068 | metI | D-methionine transport system permease protein MetI | low | > 83 |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_01055 | | Glycine cleavage system transcriptional activator | 0.46 | MPMX19_05548 | | D-methionine transport system permease protein MetI | 0.33 | 19 |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS20105 | | transcriptional regulator | 0.47 | AZOBR_RS19470 | | DL-methionine transporter permease subunit | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_1560 | | Glycine cleavage system transcriptional activator GcvA | 0.43 | Pf6N2E2_3928 | | Methionine ABC transporter permease protein | low | > 103 |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A2214 | | Transcriptional Regulator, LysR family (NCBI) | 0.48 | Rru_A2418 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | low | > 58 |
| Paraburkholderia graminis OAS925 | 0.37 | ABIE53_001336 | | LysR family glycine cleavage system transcriptional activator | 0.47 | ABIE53_003138 | | D-methionine transport system permease protein | low | > 113 |
| Caulobacter crescentus NA1000 | 0.37 | CCNA_01174 | | LysR-family transcriptional regulator | 0.32 | CCNA_02750 | | ABC transporter permease protein | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.37 | CCNA_01174 | | LysR-family transcriptional regulator | 0.32 | CCNA_02750 | | ABC transporter permease protein | low | > 67 |
| Ralstonia solanacearum GMI1000 | 0.35 | RS_RS13815 | | transcriptional regulator GcvA | 0.49 | RS_RS04580 | | ABC transporter permease | low | > 80 |
| Agrobacterium fabrum C58 | 0.34 | Atu2078 | | transcriptional regulator, LysR family | 0.44 | Atu4488 | | ABC transporter permease | low | > 89 |
| Pseudomonas sp. SVBP6 | 0.34 | COO64_RS14470 | gcvA | transcriptional regulator GcvA | 0.43 | COO64_RS00840 | | methionine ABC transporter permease | low | > 91 |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS11810 | | LysR family transcriptional regulator | 0.51 | BPHYT_RS14815 | | methionine ABC transporter permease | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.34 | ABZR87_RS01495 | | transcriptional regulator GcvA | 0.51 | ABZR87_RS09535 | | methionine ABC transporter permease | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS20860 | | transcriptional regulator GcvA | 0.33 | ABZR86_RS00470 | | methionine ABC transporter permease | low | > 74 |
| Ralstonia solanacearum PSI07 | 0.33 | RPSI07_RS11375 | | transcriptional regulator GcvA | 0.48 | RPSI07_RS19625 | | ABC transporter permease | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.32 | RALBFv3_RS22095 | | transcriptional regulator GcvA | 0.51 | RALBFv3_RS13845 | | ABC transporter permease | low | > 76 |
| Ralstonia solanacearum UW163 | 0.32 | UW163_RS22635 | | transcriptional regulator GcvA | 0.51 | UW163_RS15965 | | ABC transporter permease | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.32 | QEN71_RS01310 | | transcriptional regulator GcvA | 0.53 | QEN71_RS04165 | | methionine ABC transporter permease | low | > 153 |
| Variovorax sp. SCN45 | 0.32 | GFF1355 | | Transcriptional regulator, LysR family | 0.33 | GFF3113 | | Methionine ABC transporter permease protein | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.31 | RR42_RS34190 | | LysR family transcriptional regulator | 0.51 | RR42_RS04560 | | methionine ABC transporter permease | low | > 128 |
| Pseudomonas aeruginosa MRSN321 | 0.31 | PFGADD_00455 | | Glycine cleavage system transcriptional activator | 0.40 | PFGADD_02748 | | ABC transporter permease | low | > 99 |
| Pseudomonas fluorescens FW300-N2C3 | 0.31 | AO356_15125 | | LysR family transcriptional regulator | 0.43 | AO356_10280 | | ABC transporter permease | low | > 104 |
| Pseudomonas aeruginosa PA14 | 0.31 | IKLFDK_23190 | | LysR family transcriptional regulator | 0.40 | IKLFDK_11515 | | ABC transporter permease | low | > 98 |
| Variovorax sp. OAS795 | 0.31 | ABID97_RS29015 | | transcriptional regulator GcvA | 0.33 | ABID97_RS21740 | | methionine ABC transporter permease | low | > 91 |
| Pseudomonas aeruginosa PUPa3 | 0.31 | NPBIFN_00459 | | Glycine cleavage system transcriptional activator | 0.40 | NPBIFN_02779 | | ABC transporter permease | low | > 101 |
| Pseudomonas sp. RS175 | 0.31 | PFR28_04727 | | Glycine cleavage system transcriptional activator | 0.43 | PFR28_04846 | | D-methionine transport system permease protein MetI | low | > 88 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.31 | H281DRAFT_02051 | | LysR family transcriptional regulator, glycine cleavage system transcriptional activator | 0.47 | H281DRAFT_03905 | | D-methionine transport system permease protein | low | > 103 |
| Pseudomonas sp. S08-1 | 0.31 | OH686_11695 | | Transcriptional regulator, LysR family | 0.42 | OH686_23815 | | Methionine ABC transporter permease protein | low | > 80 |
| Pseudomonas lactucae CFBP13502 | 0.30 | GEMAOFIL_02417 | | Glycine cleavage system transcriptional activator | 0.44 | GEMAOFIL_02832 | | D-methionine transport system permease protein MetI | low | > 96 |
| Pseudomonas sp. BP01 | 0.30 | JOY50_RS09180 | | LysR family transcriptional regulator | 0.41 | JOY50_RS18485 | | methionine ABC transporter permease | low | > 84 |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS01615 | | transcriptional regulator GcvA | 0.43 | ABIE40_RS23110 | | methionine ABC transporter permease | low | > 107 |
| Pseudomonas protegens RBAN4 | 0.30 | FABNJH_19680 | lysR | Transcriptional regulator, LysR family | 0.43 | FABNJH_01255 | metP | ABC-type methionine transport system, permease component | — | — |
| Pseudomonas simiae WCS417 | 0.30 | PS417_23350 | | LysR family transcriptional regulator | 0.40 | PS417_01060 | | ABC transporter permease | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS25165 | | LysR family transcriptional regulator | 0.42 | PFLU_RS01170 | | ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.30 | Pf1N1B4_1817 | | Glycine cleavage system transcriptional activator | 0.39 | Pf1N1B4_1703 | | Methionine ABC transporter permease protein | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS25165 | | LysR family transcriptional regulator | 0.42 | PFLU_RS01170 | | ABC transporter permease | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_5015 | | transcriptional regulator, LysR family | 0.39 | Psyr_0349 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_5015 | | transcriptional regulator, LysR family | 0.39 | Psyr_0349 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_555 | | Glycine cleavage system transcriptional activator | 0.43 | PfGW456L13_454 | | Methionine ABC transporter permease protein | low | > 87 |
| Pseudomonas orientalis W4I3 | 0.29 | QF045_RS03520 | | LysR family transcriptional regulator | 0.40 | QF045_RS04195 | | methionine ABC transporter permease | low | > 93 |
| Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_15505 | | LysR family transcriptional regulator | 0.43 | AO353_11630 | | ABC transporter permease | low | > 101 |
| Pseudomonas sp. DMC3 | 0.29 | GFF687 | | Glycine cleavage system transcriptional activator | 0.43 | GFF4207 | | D-methionine transport system permease protein MetI | low | > 89 |
| Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS07925 | | LysR family transcriptional regulator | 0.48 | HSERO_RS04975 | | methionine ABC transporter permease | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.28 | GFF4407 | | Glycine cleavage system transcriptional activator | 0.49 | GFF5038 | | Methionine ABC transporter permease protein | — | — |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS23870 | | transcriptional regulator GcvA | 0.44 | ABIE41_RS03515 | | methionine ABC transporter permease | low | > 77 |
| Acidovorax sp. GW101-3H11 | 0.28 | Ac3H11_902 | | Glycine cleavage system transcriptional activator | 0.48 | Ac3H11_632 | | Methionine ABC transporter permease protein | — | — |
| Sinorhizobium meliloti 1021 | 0.28 | SMa0179 | | LysR family transcriptional regulator | 0.43 | SMc03158 | | ABC transporter permease | low | > 103 |
| Dechlorosoma suillum PS | 0.27 | Dsui_2033 | | transcriptional regulator | 0.34 | Dsui_2067 | | ABC-type metal ion transport system, permease component | low | > 51 |
| Acinetobacter radioresistens SK82 | 0.27 | MPMX26_01927 | | Glycine cleavage system transcriptional activator | 0.47 | MPMX26_01860 | | Methionine import system permease protein MetP | — | — |
| Castellaniella sp019104865 MT123 | 0.27 | ABCV34_RS01790 | | LysR substrate-binding domain-containing protein | 0.32 | ABCV34_RS09540 | | methionine ABC transporter permease | low | > 48 |
| Rhodanobacter denitrificans FW104-10B01 | 0.27 | LRK54_RS06630 | | transcriptional regulator GcvA | 0.33 | LRK54_RS14730 | | ABC transporter permease | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.27 | LRK55_RS06375 | | transcriptional regulator GcvA | 0.33 | LRK55_RS14445 | | methionine ABC transporter permease | low | > 63 |
| Rhodanobacter sp000427505 FW510-R12 | 0.26 | LRK53_RS10360 | | LysR substrate-binding domain-containing protein | 0.31 | LRK53_RS13865 | | ABC transporter permease | low | > 59 |
Not shown: 15 genomes with orthologs for CSW01_04590 only; 9 genomes with orthologs for CSW01_04640 only