Conservation of cofitness between CSW01_13685 and CSW01_02875 in Vibrio cholerae E7946 ATCC 55056

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13685 xanthine permease XanP 1.0 CSW01_02875 DNA recombination/repair protein RecA 0.42 12
Dickeya dadantii 3937 0.66 DDA3937_RS00165 uracil-xanthine permease 0.82 DDA3937_RS16245 recombinase RecA low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF351 Xanthine permease 0.81 GFF4693 RecA protein — —
Serratia liquefaciens MT49 0.65 IAI46_24915 NCS2 family protein 0.80 IAI46_03840 recombinase RecA low > 87
Pantoea sp. MT58 0.65 IAI47_00495 uracil-xanthine permease 0.80 IAI47_04300 recombinase RecA low > 76
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3903 uracil-xanthine permease 0.81 EX28DRAFT_2785 protein RecA — —
Erwinia tracheiphila HP pepo 2.2 0.65 IJEDHG_08340 pbuX xanthine permease XanP 0.81 IJEDHG_01625 recA recombinase RecA — —
Klebsiella michiganensis M5al 0.65 BWI76_RS27525 xanthine permease XanP 0.80 BWI76_RS22180 recombinase RecA — —
Enterobacter sp. TBS_079 0.65 MPMX20_00082 Xanthine permease XanP 0.81 MPMX20_03580 Protein RecA low > 85
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS18850 uracil-xanthine permease 0.81 PagCFBP13505_RS16670 recombinase RecA 0.59 71
Erwinia tracheiphila SCR3 0.65 LU632_RS22185 uracil-xanthine permease family protein 0.81 LU632_RS15735 recA recombinase RecA — —
Klebsiella pneumoniae MKP103 0.65 KDGMDA_08200 xanthine permease XanP 0.81 KDGMDA_02850 recombinase RecA low > 95
Rahnella sp. WP5 0.65 EX31_RS15835 uracil-xanthine permease 0.82 EX31_RS07800 recombinase RecA low > 89
Erwinia amylovora T8 0.65 OLJFJH_05545 xanthine permease XanP 0.80 OLJFJH_09575 recombinase RecA low > 58
Escherichia coli ECRC102 0.64 NIAGMN_13290 xanP xanthine/proton symporter XanP 0.80 NIAGMN_18475 recA recombinase RecA — —
Escherichia coli ECRC100 0.64 OKFHMN_15530 xanP xanthine/proton symporter XanP 0.80 OKFHMN_20705 recA recombinase RecA — —
Escherichia coli ECRC101 0.64 MCAODC_06040 xanP xanthine/proton symporter XanP 0.80 MCAODC_11230 recA recombinase RecA low > 87
Escherichia coli Nissle 1917 0.64 ECOLIN_RS20810 xanthine/proton symporter XanP 0.80 ECOLIN_RS15060 recombinase RecA — —
Escherichia coli BW25113 0.64 b3654 yicE predicted transporter (NCBI) 0.80 b2699 recA recombinase A (NCBI) low > 76
Escherichia coli BL21 0.64 ECD_03512 xanthine permease 0.80 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00047 Xanthine permease XanP 0.80 OHPLBJKB_01035 Protein RecA low > 74
Pectobacterium carotovorum WPP14 0.64 HER17_RS21400 uracil-xanthine permease family protein 0.83 HER17_RS05045 recombinase RecA low > 75
Escherichia coli ECRC62 0.64 BNILDI_04105 xanP xanthine/proton symporter XanP 0.80 BNILDI_11105 recA recombinase RecA low > 75
Escherichia coli ECRC98 0.64 JDDGAC_19155 xanP xanthine/proton symporter XanP 0.80 JDDGAC_24370 recA recombinase RecA — —
Escherichia fergusonii Becca 0.64 EFB2_00134 Xanthine permease XanP 0.80 EFB2_01225 Protein RecA low > 86
Escherichia coli ECOR27 0.64 NOLOHH_07415 xanP xanthine/proton symporter XanP 0.80 NOLOHH_12545 recA recombinase RecA low > 76
Escherichia coli ECOR38 0.64 HEPCGN_14355 xanP xanthine/proton symporter XanP 0.80 HEPCGN_19900 recA recombinase RecA low > 88
Escherichia coli ECRC99 0.64 KEDOAH_12615 xanP xanthine/proton symporter XanP 0.80 KEDOAH_07430 recA recombinase RecA — —
Dickeya dianthicola ME23 0.64 DZA65_RS22165 uracil-xanthine permease 0.82 DZA65_RS17450 recombinase RecA — —
Dickeya dianthicola 67-19 0.64 HGI48_RS21195 uracil-xanthine permease 0.82 HGI48_RS16355 recombinase RecA low > 71
Acinetobacter radioresistens SK82 0.55 MPMX26_02490 Xanthine permease XanP 0.71 MPMX26_01308 Protein RecA low > 36
Pseudomonas sp. SVBP6 0.54 COO64_RS24120 nucleobase:cation symporter-2 family protein 0.73 COO64_RS19930 recA recombinase RecA low > 93
Acinetobacter baumannii LAC-4 0.53 RR41_RS03300 uracil-xanthine permease family protein 0.71 RR41_RS08110 recombinase RecA — —
Pseudomonas segetis P6 0.53 MPMX49_04448 Xanthine permease XanP 0.73 MPMX49_03330 Protein RecA low > 75
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS21730 uracil-xanthine permease family protein 0.73 DY961_RS14895 recA;go_component=cytoplasm|0005737||IEA;go_function=DNA recombinase RecA low > 100
Pseudomonas aeruginosa PA14 0.52 IKLFDK_23675 xanthine permease XanP 0.73 IKLFDK_18465 recombinase RecA low > 98
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS37565 uracil-xanthine permease family protein 0.73 DQ20_RS42235 recA;go_component=cytoplasm|0005737||IEA;go_function=DNA recombinase RecA low > 101
Pseudomonas sp. BP01 0.52 JOY50_RS06475 nucleobase:cation symporter-2 family protein 0.72 JOY50_RS23780 recA recombinase RecA low > 84
Pseudomonas putida KT2440 0.51 PP_3992 xanthine permease 0.72 PP_1629 Protein RecA low > 96
Parabacteroides merdae CL09T00C40 0.51 HMPREF1078_RS15780 nucleobase:cation symporter-2 family protein 0.55 HMPREF1078_RS00095 recombinase RecA low > 61
Phocaeicola dorei CL03T12C01 0.50 ABI39_RS12615 purine permease 0.57 ABI39_RS11930 recombinase RecA low > 72
Phocaeicola vulgatus CL09T03C04 0.50 HMPREF1058_RS16700 purine permease 0.56 HMPREF1058_RS15965 recombinase RecA low > 67
Bacteroides thetaiotaomicron VPI-5482 0.50 BT4473 putative purine permease (NCBI ptt file) 0.55 BT4610 RecA (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.50 HMPREF1181_RS16580 purine permease 0.55 HMPREF1181_RS11910 recombinase RecA low > 56
Bacteroides ovatus ATCC 8483 0.50 BACOVA_05281 xanthine permease 0.55 BACOVA_05402 RecA protein low > 96
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_23860 xanthine permease XanP 0.73 AO353_16805 recombinase RecA low > 101
Pseudomonas orientalis W4I3 0.49 QF045_RS17365 nucleobase:cation symporter-2 family protein 0.72 QF045_RS08730 recombinase RecA low > 93
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_02758 Xanthine permease XanP 0.73 GEMAOFIL_01333 Protein RecA low > 96
Pseudomonas simiae WCS417 0.49 PS417_12545 xanthine permease XanP 0.72 PS417_05815 recombinase RecA low > 88
Pseudomonas sp. DMC3 0.48 GFF3458 Xanthine permease XanP 0.73 GFF2111 Protein RecA low > 89
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS13230 purine permease 0.72 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas fluorescens SBW25 0.48 PFLU_RS13230 purine permease 0.72 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas stutzeri RCH2 0.47 Psest_1193 xanthine permease 0.72 Psest_2872 protein RecA 0.16 57
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_3236 Xanthine permease 0.73 PfGW456L13_4668 RecA protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_4713 Xanthine permease 0.73 Pf1N1B4_3143 RecA protein low > 87
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_0676 Xanthine/uracil permease family 0.72 Psyr_1378 RecA protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_0676 Xanthine/uracil permease family 0.72 Psyr_1378 RecA protein low > 86
Alteromonas macleodii MIT1002 0.41 MIT1002_01588 Xanthine permease XanP 0.77 MIT1002_00955 Recombinase A low > 70
Phaeobacter inhibens DSM 17395 0.27 PGA1_c05500 putative purine permease 0.65 PGA1_c15260 protein recA (recombinase A) low > 62
Dinoroseobacter shibae DFL-12 0.27 Dshi_3202 uracil-xanthine permease (RefSeq) 0.60 Dshi_1643 recA protein (RefSeq) low > 64
Sinorhizobium meliloti 1021 0.22 SMc02513 permease transmembrane protein 0.66 SMc00760 recombinase A low > 103
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS16160 purine permease 0.66 BPHYT_RS16360 recombinase RecA — —
Azospirillum brasilense Sp245 0.22 AZOBR_RS30760 purine permease 0.66 AZOBR_RS11095 recombinase RecA low > 97
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS05260 purine permease 0.63 RR42_RS03080 recombinase RecA low > 128
Variovorax sp. SCN45 0.21 GFF5230 Xanthine-uracil permease 0.64 GFF5390 RecA protein — —
Pseudomonas sp. RS175 0.21 PFR28_01209 Uric acid transporter UacT 0.73 PFR28_00472 Protein RecA low > 88
Xanthobacter sp. DMC5 0.21 GFF1802 Uric acid transporter UacT 0.65 GFF1169 Protein RecA — —
Ralstonia solanacearum PSI07 0.21 RPSI07_RS14075 purine permease 0.64 RPSI07_RS21260 recombinase RecA low > 81
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS15085 nucleobase:cation symporter-2 family protein 0.63 ABZR87_RS07965 recombinase RecA low > 80
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_01840 uracil permease 0.73 AO356_05670 recombinase RecA low > 104
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2235 Xanthine permease 0.73 Pf6N2E2_2993 RecA protein — —
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS02545 nucleobase:cation symporter-2 family protein 0.66 QEN71_RS02335 recombinase RecA — —
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_04168 nucleobase:cation symporter-2, NCS2 family 0.66 H281DRAFT_04208 RecA protein low > 103
Ralstonia solanacearum UW163 0.20 UW163_RS10490 purine permease 0.63 UW163_RS01625 recombinase RecA — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS03235 purine permease 0.63 RALBFv3_RS12010 recombinase RecA low > 76
Variovorax sp. OAS795 0.20 ABID97_RS22265 nucleobase:cation symporter-2 family protein 0.64 ABID97_RS02275 recombinase RecA low > 91
Paraburkholderia graminis OAS925 0.20 ABIE53_003405 xanthine permease 0.66 ABIE53_003448 recombination protein RecA low > 113
Ralstonia solanacearum GMI1000 0.20 RS_RS10625 purine permease 0.63 RS_RS02760 DNA recombination/repair protein RecA — —
Castellaniella sp019104865 MT123 0.20 ABCV34_RS13785 nucleobase:cation symporter-2 family protein 0.67 ABCV34_RS04460 recombinase RecA low > 48
Bifidobacterium breve UCC2003 0.19 BBR_RS14975 purine permease 0.61 BBR_RS16530 recombinase RecA low > 34
Acidovorax sp. GW101-3H11 0.19 Ac3H11_1081 Xanthine-uracil permease 0.63 Ac3H11_1255 RecA protein — —
Azospirillum sp. SherDot2 0.18 MPMX19_05710 Uric acid transporter UacT 0.66 MPMX19_00869 Protein RecA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF3305 Xanthine permease 0.62 GFF2500 RecA protein low > 90

Not shown: 1 genomes with orthologs for CSW01_13685 only; 38 genomes with orthologs for CSW01_02875 only