Conservation of cofitness between CSW01_13250 and CSW01_01960 in Vibrio cholerae E7946 ATCC 55056

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13250 aspartate aminotransferase family protein 1.0 CSW01_01960 hypothetical protein 0.39 19
Shewanella amazonensis SB2B 0.71 Sama_1628 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.69 Sama_1665 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.70 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.63 Shew_1893 hypothetical protein (RefSeq) low > 60
Pseudomonas aeruginosa MRSN321 0.66 PFGADD_04236 aruC Succinylornithine transaminase/acetylornithine aminotransferase 0.68 PFGADD_05537 yjbQ YjbQ family protein low > 99
Pseudomonas aeruginosa PUPa3 0.66 NPBIFN_04295 aruC Succinylornithine transaminase/acetylornithine aminotransferase 0.68 NPBIFN_05613 yjbQ YjbQ family protein low > 101
Pseudomonas aeruginosa PA14 0.65 IKLFDK_03985 Succinylornithine transaminase/acetylornithine aminotransferase 0.68 IKLFDK_27020 Uncharacterised protein family UPF0047 low > 98
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.66 Psyr_0188 Protein of unknown function UPF0047 low > 86
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.66 Psyr_0188 Protein of unknown function UPF0047 low > 86
Pectobacterium carotovorum WPP14 0.65 HER17_RS01910 aspartate aminotransferase family protein 0.69 HER17_RS03555 secondary thiamine-phosphate synthase enzyme YjbQ low > 75
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13516_RS01970 argD bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.65 PagCFBP13516_RS18065 secondary thiamine-phosphate synthase enzyme YjbQ low > 80
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) 0.67 Pf6N2E2_4413 FIG004064: hypothetical protein low > 103
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_2221 acetylornithine and succinylornithine transaminases/succinylornithine transaminase family 0.44 B158DRAFT_2014 secondary thiamine-phosphate synthase enzyme low > 40
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) 0.68 PfGW456L13_839 FIG004064: hypothetical protein low > 87
Erwinia amylovora T8 0.64 OLJFJH_04030 bifunctional succinylornithine transaminase/acetylornithine transaminase 0.64 OLJFJH_03445 Uncharacterised protein family UPF0047 low > 58
Pseudomonas stutzeri RCH2 0.64 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family 0.64 Psest_3770 secondary thiamine-phosphate synthase enzyme low > 67
Pseudomonas lactucae CFBP13502 0.64 GEMAOFIL_04485 Succinylornithine transaminase/acetylornithine aminotransferase 0.67 GEMAOFIL_05660 hypothetical protein low > 96
Serratia liquefaciens MT49 0.64 IAI46_23590 aspartate aminotransferase family protein 0.59 IAI46_22925 YjbQ family protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_18725 acetylornithine aminotransferase 0.67 AO356_12710 hypothetical protein low > 104
Dickeya dadantii 3937 0.64 DDA3937_RS19450 aspartate aminotransferase family protein 0.64 DDA3937_RS17595 YjbQ family protein low > 74
Pantoea sp. MT58 0.64 IAI47_01955 aspartate aminotransferase family protein 0.65 IAI47_17830 YjbQ family protein low > 76
Pseudomonas sp. S08-1 0.64 OH686_21290 Succinylornithine transaminase 0.68 OH686_13770 UPF0047 protein YjbQ low > 80
Pseudomonas fluorescens SBW25 0.64 PFLU_RS23315 aspartate aminotransferase family protein 0.66 PFLU_RS29295 YjbQ family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS23315 aspartate aminotransferase family protein 0.66 PFLU_RS29295 YjbQ family protein 0.24 90
Pseudomonas sp. DMC3 0.64 GFF4879 Succinylornithine transaminase/acetylornithine aminotransferase 0.68 GFF373 hypothetical protein low > 89
Pseudomonas simiae WCS417 0.63 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.67 PS417_27610 hypothetical protein low > 88
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS23375 aspartate aminotransferase family protein 0.43 QEN71_RS15455 secondary thiamine-phosphate synthase enzyme YjbQ
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.68 Pf1N1B4_2168 FIG004064: hypothetical protein low > 87
Escherichia fergusonii Becca 0.63 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.64 EFB2_04535 hypothetical protein low > 86
Pseudomonas orientalis W4I3 0.63 QF045_RS23815 aspartate aminotransferase family protein 0.67 QF045_RS01975 secondary thiamine-phosphate synthase enzyme YjbQ low > 93
Escherichia coli Nissle 1917 0.63 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.64 ECOLIN_RS23475 secondary thiamine-phosphate synthase enzyme YjbQ low > 55
Paraburkholderia graminis OAS925 0.63 ABIE53_001769 succinylornithine aminotransferase 0.43 ABIE53_005988 secondary thiamine-phosphate synthase enzyme low > 113
Escherichia coli BL21 0.63 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.63 ECD_03928 thiamine phosphate synthase low > 61
Escherichia coli BW25113 0.63 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.63 b4056 yjbQ hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 0.63 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.63 HEPCGN_11520 yjbQ UPF0047 protein YjbQ low > 88
Escherichia coli ECRC99 0.63 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.63 KEDOAH_15245 yjbQ UPF0047 protein YjbQ
Escherichia coli ECRC102 0.63 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.63 NIAGMN_10750 yjbQ UPF0047 protein YjbQ low > 80
Escherichia coli ECRC100 0.63 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.63 OKFHMN_12905 yjbQ UPF0047 protein YjbQ low > 79
Escherichia coli ECRC101 0.63 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.63 MCAODC_03415 yjbQ UPF0047 protein YjbQ low > 87
Escherichia coli ECRC98 0.63 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.63 JDDGAC_16540 yjbQ UPF0047 protein YjbQ low > 87
Escherichia coli ECOR27 0.63 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.63 NOLOHH_05155 yjbQ UPF0047 protein YjbQ low > 75
Pseudomonas sp. RS175 0.63 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase 0.67 PFR28_04381 hypothetical protein low > 88
Escherichia coli ECRC62 0.63 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.63 BNILDI_06370 yjbQ UPF0047 protein YjbQ low > 75
Pseudomonas protegens RBAN4 0.63 FABNJH_23320 astC Acetylornithine aminotransferase 0.67 FABNJH_30355 yjbQ YjbQ family protein
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_06478 succinylornithine aminotransferase apoenzyme 0.42 H281DRAFT_02804 secondary thiamine-phosphate synthase enzyme low > 103
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_03025 acetylornithine aminotransferase 0.68 AO353_09065 hypothetical protein low > 101
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.63 OHPLBJKB_03985 hypothetical protein low > 74
Enterobacter asburiae PDN3 0.62 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.65 EX28DRAFT_4248 secondary thiamine-phosphate synthase enzyme low > 76
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS07695 acetylornithine aminotransferase 0.43 BPHYT_RS26250 hypothetical protein
Klebsiella pneumoniae MRSN742743 0.62 GJGHJB_00370 argD Acetylornithine/succinyldiaminopimelate aminotransferase 0.64 GJGHJB_04696 yjbQ YjbQ family protein low > 83
Klebsiella pneumoniae MKP103 0.62 KDGMDA_06830 bifunctional succinylornithine transaminase/acetylornithine transaminase 0.64 KDGMDA_10390 Thiamin phosphate synthase low > 94
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.58 GFF1425 FIG004064: hypothetical protein low > 78
Enterobacter sp. TBS_079 0.62 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.64 MPMX20_00274 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.61 BWI76_RS26000 aspartate aminotransferase family protein 0.64 BWI76_RS01935 thiamin phosphate synthase low > 92
Marinobacter adhaerens HP15 0.61 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.64 HP15_721 protein belonging to uncharacterized protein family UPF0047 low > 73
Rhodanobacter denitrificans MT42 0.45 LRK55_RS06335 acetylornithine/succinylornithine family transaminase 0.43 LRK55_RS04050 secondary thiamine-phosphate synthase enzyme YjbQ low > 63
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS17400 acetylornithine transaminase 0.43 ABZR86_RS10440 secondary thiamine-phosphate synthase enzyme YjbQ low > 74
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS06590 acetylornithine/succinylornithine family transaminase 0.43 LRK54_RS04275 secondary thiamine-phosphate synthase enzyme YjbQ low > 59
Rhodanobacter sp000427505 FW510-R12 0.43 LRK53_RS01815 acetylornithine/succinylornithine family transaminase 0.43 LRK53_RS05655 secondary thiamine-phosphate synthase enzyme YjbQ low > 59
Bosea sp. OAE506 0.43 ABIE41_RS04340 aspartate aminotransferase family protein 0.40 ABIE41_RS12025 secondary thiamine-phosphate synthase enzyme YjbQ
Agrobacterium fabrum C58 0.42 Atu0428 acetylornithine aminotransferase 0.40 Atu2164 hypothetical protein
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_17070 astC acetylornithine transaminase 0.40 OKGIIK_11150 yjbQ secondary thiamine-phosphate synthase low > 53
Rhizobium sp. OAE497 0.41 ABIE40_RS02320 aspartate aminotransferase family protein 0.39 ABIE40_RS12650 secondary thiamine-phosphate synthase enzyme YjbQ low > 107
Methanococcus maripaludis JJ 0.40 MMJJ_RS08660 acetylornithine transaminase 0.28 MMJJ_RS08515 secondary thiamine-phosphate synthase enzyme YjbQ low > 28
Methanococcus maripaludis S2 0.39 MMP_RS05690 acetylornithine transaminase 0.28 MMP_RS05835 secondary thiamine-phosphate synthase enzyme YjbQ
Phaeobacter inhibens DSM 17395 0.39 PGA1_c24230 acetylornithine aminotransferase ArgD 0.42 PGA1_c08850 secondary thiamine-phosphate synthase enzyme low > 62
Sinorhizobium meliloti 1021 0.39 SMc02138 acetylornithine transaminase 0.37 SMc01559 hypothetical protein low > 103
Azospirillum brasilense Sp245 0.38 AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] (from data) 0.42 AZOBR_RS06035 hypothetical protein
Azospirillum sp. SherDot2 0.38 MPMX19_02177 Succinylornithine transaminase/acetylornithine aminotransferase 0.39 MPMX19_00792 hypothetical protein low > 112
Synechococcus elongatus PCC 7942 0.37 Synpcc7942_0943 argD acetylornithine aminotransferase 0.40 Synpcc7942_0078 hypothetical protein
Synechocystis sp000284455 PCC 6803 0.37 SGL_RS04875 aspartate aminotransferase family protein 0.40 SGL_RS10345 secondary thiamine-phosphate synthase enzyme YjbQ
Xanthobacter sp. DMC5 0.37 GFF1808 Succinylornithine transaminase/acetylornithine aminotransferase 0.37 GFF135 hypothetical protein
Dechlorosoma suillum PS 0.35 Dsui_0023 acetylornithine/succinylornithine aminotransferase 0.40 Dsui_0738 secondary thiamine-phosphate synthase enzyme low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU2347 argD acetylornithine aminotransferase (TIGR) 0.26 DVU0499 conserved hypothetical protein TIGR00149 (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_3149 acetylornithine aminotransferase (RefSeq) 0.28 DvMF_2505 protein of unknown function UPF0047 (RefSeq) low > 51
Variovorax sp. OAS795 0.31 ABID97_RS08635 aspartate aminotransferase family protein 0.43 ABID97_RS16015 secondary thiamine-phosphate synthase enzyme YjbQ
Methylophilus sp. DMC18 0.30 GFF641 Acetylornithine aminotransferase 0.42 GFF1790 hypothetical protein
Bacteroides ovatus ATCC 8483 0.29 BACOVA_03588 aminotransferase, class III 0.51 BACOVA_02253 secondary thiamine-phosphate synthase enzyme low > 96
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS03445 aspartate aminotransferase family protein 0.58 HMPREF1181_RS13780 YjbQ family protein low > 56
Cellulophaga baltica 18 0.27 M666_RS02640 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.60 M666_RS10125 secondary thiamine-phosphate synthase enzyme YjbQ low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_0577 Ornithine aminotransferase (EC 2.6.1.13) (from data) 0.64 Echvi_1030 secondary thiamine-phosphate synthase enzyme low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS15500 aspartate aminotransferase family protein 0.67 ABZR88_RS15345 secondary thiamine-phosphate synthase enzyme YjbQ
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_15645 ornithine--oxo-acid transaminase 0.66 CA264_16965 hypothetical protein low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS15205 aspartate aminotransferase family protein 0.65 CA265_RS16180 secondary thiamine-phosphate synthase low > 88

Not shown: 40 genomes with orthologs for CSW01_13250 only; 2 genomes with orthologs for CSW01_01960 only