| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_01280 | | GDP-mannose 4,6-dehydratase | 1.0 | CSW01_01285 | | perosamine synthetase | 1.00 | 4 |
| Dickeya dianthicola 67-19 | 0.87 | HGI48_RS18595 | | GDP-mannose 4,6-dehydratase | 0.26 | HGI48_RS21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 71 |
| Dickeya dadantii 3937 | 0.87 | DDA3937_RS18665 | | GDP-mannose 4,6-dehydratase | 0.26 | DDA3937_RS21390 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 74 |
| Dickeya dianthicola ME23 | 0.87 | DZA65_RS19730 | | GDP-mannose 4,6-dehydratase | 0.25 | DZA65_RS22610 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.83 | Psest_1818 | | GDP-mannose 4,6-dehydratase | 0.22 | Psest_1811 | | UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase | — | — |
| Escherichia coli ECRC99 | 0.83 | KEDOAH_03710 | | GDP-mannose 4,6-dehydratase | 0.54 | KEDOAH_03720 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Escherichia coli ECRC102 | 0.83 | NIAGMN_22385 | | GDP-mannose 4,6-dehydratase | 0.54 | NIAGMN_22375 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Escherichia coli ECRC100 | 0.83 | OKFHMN_24440 | | GDP-mannose 4,6-dehydratase | 0.54 | OKFHMN_24430 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Escherichia coli ECRC98 | 0.83 | JDDGAC_28550 | | GDP-mannose 4,6-dehydratase | 0.54 | JDDGAC_28540 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.83 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.25 | GFF1858 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) | low | > 78 |
| Escherichia coli ECRC101 | 0.83 | MCAODC_20500 | | GDP-mannose 4,6-dehydratase | 0.54 | MCAODC_20510 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Enterobacter asburiae PDN3 | 0.83 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | 0.24 | EX28DRAFT_4082 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | 0.37 | 29 |
| Escherichia coli ECOR27 | 0.83 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | 0.23 | NOLOHH_14620 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 76 |
| Escherichia coli ECRC62 | 0.83 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | 0.22 | BNILDI_13535 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Escherichia coli ECOR38 | 0.83 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | 0.24 | HEPCGN_03130 | vioA | dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA | — | — |
| Escherichia coli BW25113 | 0.83 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | 0.22 | b2253 | arnB | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) | low | > 76 |
| Escherichia fergusonii Becca | 0.83 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | 0.23 | EFB2_01603 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 0.49 | 74 |
| Escherichia coli BL21 | 0.83 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | 0.24 | ECD_01942 | | VioA, involved in dTDP-N-acetylviosamine synthesis | — | — |
| Escherichia coli Nissle 1917 | 0.82 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | 0.22 | ECOLIN_RS13125 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 55 |
| Enterobacter sp. TBS_079 | 0.82 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | 0.24 | MPMX20_04380 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 85 |
| Phaeobacter inhibens DSM 17395 | 0.81 | PGA1_65p00310 | | GDP-mannose 4,6-dehydratase Gmd | 0.22 | PGA1_c05070 | | putative pyridoxal-phosphate-dependent aminotransferase | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.78 | GFF2554 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.20 | GFF1844 | | Aminotransferase | low | > 90 |
| Pectobacterium carotovorum WPP14 | 0.78 | HER17_RS14540 | | GDP-mannose 4,6-dehydratase | 0.24 | HER17_RS06520 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Cupriavidus basilensis FW507-4G11 | 0.76 | RR42_RS33235 | | GDP-mannose 4,6-dehydratase | 0.25 | RR42_RS15735 | | pyridoxal phosphate-dependent aminotransferase | 0.39 | 114 |
| Variovorax sp. SCN45 | 0.74 | GFF61 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.22 | GFF6876 | | Aminotransferase, DegT/DnrJ/EryC1/StrS family | low | > 127 |
| Castellaniella sp019104865 MT123 | 0.71 | ABCV34_RS12935 | | GDP-mannose 4,6-dehydratase | 0.22 | ABCV34_RS12945 | | DegT/DnrJ/EryC1/StrS family aminotransferase | — | — |
| Synechococcus elongatus PCC 7942 | 0.71 | Synpcc7942_1342 | gmd | GDP-mannose 4,6-dehydratase | 0.34 | Synpcc7942_0056 | rfbE | perosamine synthetase | — | — |
| Dechlorosoma suillum PS | 0.71 | Dsui_0085 | | GDP-mannose 4,6-dehydratase | 0.23 | Dsui_1769 | | putative PLP-dependent enzyme possibly involved in cell wall biogenesis | low | > 51 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.70 | CA265_RS19210 | | GDP-mannose 4,6-dehydratase | 0.35 | CA265_RS01760 | | aminotransferase DegT | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.70 | QEN71_RS26360 | | GDP-mannose 4,6-dehydratase | 0.22 | QEN71_RS29145 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 153 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.69 | DVU0448 | gmd | GDP-mannose 4,6-dehydratase (TIGR) | 0.24 | DVU3010 | lpsC | aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) | low | > 55 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.69 | H281DRAFT_04776 | | GDPmannose 4,6-dehydratase | 0.22 | H281DRAFT_00805 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
| Burkholderia phytofirmans PsJN | 0.69 | BPHYT_RS04000 | | GDP-mannose 4,6-dehydratase | 0.21 | BPHYT_RS08930 | | aminotransferase DegT | — | — |
| Paraburkholderia graminis OAS925 | 0.68 | ABIE53_000940 | | GDPmannose 4,6-dehydratase | 0.22 | ABIE53_000145 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | low | > 113 |
| Rhodanobacter denitrificans MT42 | 0.68 | LRK55_RS03650 | | GDP-mannose 4,6-dehydratase | 0.21 | LRK55_RS04940 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 63 |
| Desulfovibrio vulgaris Miyazaki F | 0.67 | DvMF_2694 | | GDP-mannose 4,6-dehydratase (RefSeq) | 0.21 | DvMF_1891 | | Glutamine--scyllo-inositol transaminase (RefSeq) | low | > 51 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.67 | ABZR88_RS18375 | | GDP-mannose 4,6-dehydratase | 0.28 | ABZR88_RS12735 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.66 | Echvi_4398 | | GDP-mannose 4,6-dehydratase | 0.24 | Echvi_0062 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | low | > 79 |
| Cellulophaga baltica 18 | 0.66 | M666_RS03410 | | GDP-mannose 4,6-dehydratase | 0.28 | M666_RS12340 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | low | > 67 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.66 | CA264_05200 | | GDP-mannose 4,6-dehydratase | 0.30 | CA264_12460 | | aminotransferase DegT | low | > 74 |
| Rhodospirillum rubrum S1H | 0.63 | Rru_A0253 | | GDP-mannose 4,6-dehydratase (NCBI) | 0.21 | Rru_A2746 | | DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.63 | AMB_RS05505 | | GDP-mannose 4,6-dehydratase | 0.28 | AMB_RS00275 | | DegT/DnrJ/EryC1/StrS family aminotransferase | — | — |
| Caulobacter crescentus NA1000 | 0.63 | CCNA_00472 | | GDP-mannose 4,6 dehydratase | 0.41 | CCNA_01064 | | perosamine synthetase | low | > 66 |
| Parabacteroides merdae CL09T00C40 | 0.63 | HMPREF1078_RS00185 | | GDP-mannose 4,6-dehydratase | 0.26 | HMPREF1078_RS01585 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | low | > 61 |
| Caulobacter crescentus NA1000 Δfur | 0.63 | CCNA_00472 | | GDP-mannose 4,6 dehydratase | 0.41 | CCNA_01064 | | perosamine synthetase | low | > 67 |
| Phocaeicola vulgatus CL09T03C04 | 0.61 | HMPREF1058_RS06615 | | GDP-mannose 4,6-dehydratase | 0.20 | HMPREF1058_RS03380 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.61 | ABI39_RS20410 | | GDP-mannose 4,6-dehydratase | 0.27 | ABI39_RS13755 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | low | > 72 |
| Bacteroides ovatus ATCC 8483 | 0.60 | BACOVA_00511 | | GDP-mannose 4,6-dehydratase | 0.20 | BACOVA_03734 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 96 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.60 | BT1224 | | GDP-mannose 4,6-dehydratase (NCBI ptt file) | 0.22 | BT3376 | | nucleotide sugar transaminase (NCBI ptt file) | — | — |
| Bacteroides stercoris CC31F | 0.60 | HMPREF1181_RS12530 | | GDP-mannose 4,6-dehydratase | 0.18 | HMPREF1181_RS14960 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | low | > 56 |
| Synechocystis sp000284455 PCC 6803 | 0.54 | SGL_RS01905 | | GDP-mannose 4,6-dehydratase | 0.34 | SGL_RS09505 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 52 |
| Rahnella sp. WP5 | 0.52 | EX31_RS02865 | | GDP-mannose 4,6-dehydratase | 0.24 | EX31_RS14020 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 89 |
| Ralstonia solanacearum PSI07 | 0.47 | RPSI07_RS19840 | | GDP-mannose 4,6-dehydratase | 0.22 | RPSI07_RS17515 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.46 | Xcc-8004.4503.1 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.22 | Xcc-8004.2801.1 | | Aminotransferase, DegT/DnrJ/EryC1/StrS family | low | > 74 |
| Pantoea agglomerans CFBP13505 P0401 | 0.46 | PagCFBP13505_RS01140 | | GDP-mannose 4,6-dehydratase | 0.25 | PagCFBP13505_RS12240 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 74 |
| Pseudomonas lactucae CFBP13502 | 0.46 | GEMAOFIL_04278 | | GDP-mannose 4,6-dehydratase | 0.21 | GEMAOFIL_05587 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 93 |
| Pseudomonas sp. SVBP6 | 0.45 | COO64_RS06615 | gmd | GDP-mannose 4,6-dehydratase | 0.22 | COO64_RS21480 | vioA | dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA | low | > 93 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | 0.23 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | 0.23 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 86 |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS05705 | | GDP-mannose 4,6-dehydratase | 0.24 | ABID97_RS02145 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 91 |
| Bosea sp. OAE506 | 0.44 | ABIE41_RS02910 | | GDP-mannose 4,6-dehydratase | 0.17 | ABIE41_RS03045 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | 0.66 | 5 |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_01210 | gmd | GDP-mannose 4,6-dehydratase | 0.23 | OKGIIK_10755 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | low | > 52 |
| Azospirillum brasilense Sp245 | 0.44 | AZOBR_RS33465 | | GDP-mannose 4 6-dehydratase | 0.21 | AZOBR_RS33605 | | erythromycin biosynthesis sensory transduction protein eryC1 | low | > 97 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.43 | A4249_RS12980 | | GDP-mannose 4,6-dehydratase | 0.19 | A4249_RS13795 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_10245 | | GDP-mannose 4,6-dehydratase | 0.25 | AO353_25530 | | UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.40 | Pf6N2E2_4242 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.23 | Pf6N2E2_2610 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_11835 | | GDP-mannose 4,6-dehydratase | 0.22 | AO356_03965 | | aminotransferase | low | > 104 |
| Pseudomonas sp. RS175 | 0.40 | PFR28_04554 | | GDP-mannose 4,6-dehydratase | 0.23 | PFR28_00919 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.40 | PfGW456L13_2338 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.37 | PfGW456L13_4375 | | perosamine synthetase | low | > 87 |
| Pseudomonas sp. DMC3 | 0.40 | GFF545 | | GDP-mannose 4,6-dehydratase | 0.21 | GFF2433 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 89 |
| Pseudomonas aeruginosa PA14 | 0.39 | IKLFDK_26150 | | GDP-mannose 4 6-dehydratase | 0.25 | IKLFDK_18130 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 100 |
| Pseudomonas fluorescens FW300-N1B4 | 0.39 | Pf1N1B4_1965 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.22 | Pf1N1B4_3586 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 87 |
| Rhodanobacter denitrificans FW104-10B01 | 0.15 | LRK54_RS05640 | | GDP-mannose 4,6-dehydratase | 0.21 | LRK54_RS05160 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 59 |
| Pantoea sp. MT58 | 0.11 | IAI47_18500 | | dTDP-glucose 4,6-dehydratase | 0.25 | IAI47_21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.10 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | 0.22 | OHPLBJKB_01458 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 74 |
| Erwinia amylovora T8 | 0.10 | OLJFJH_12090 | | dTDP-glucose 4 6-dehydratase | 0.24 | OLJFJH_17365 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | — | — |
Not shown: 11 genomes with orthologs for CSW01_01280 only; 21 genomes with orthologs for CSW01_01285 only