Conservation of cofitness between CSW01_10560 and CSW01_00205 in Vibrio cholerae E7946 ATCC 55056

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10560 chorismate synthase 1.0 CSW01_00205 hemolysin III family protein 0.55 1
Shewanella amazonensis SB2B 0.79 Sama_2159 chorismate synthase (RefSeq) 0.44 Sama_1862 hemolysin III family channel protein (RefSeq) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_01376 Chorismate synthase 0.73 OHPLBJKB_00816 hypothetical protein low > 74
Escherichia coli BW25113 0.77 b2329 aroC chorismate synthase (NCBI) 0.73 b2899 yqfA predicted oxidoreductase, inner membrane subunit (NCBI) low > 76
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0275 chorismate synthase (EC 4.2.3.5) 0.76 EX28DRAFT_2950 channel protein, hemolysin III family — —
Escherichia coli BL21 0.77 ECD_02254 chorismate synthase 0.73 ECD_02731 hemolysin III family HylIII inner membrane protein low > 61
Escherichia fergusonii Becca 0.77 EFB2_01529 Chorismate synthase 0.73 EFB2_01002 hypothetical protein low > 86
Escherichia coli ECRC101 0.77 MCAODC_13655 aroC chorismate synthase 0.73 MCAODC_10065 yqfA hemolysin III family protein low > 87
Escherichia coli ECOR38 0.77 HEPCGN_21820 aroC chorismate synthase 0.73 HEPCGN_18835 yqfA hemolysin III family protein low > 88
Escherichia coli ECRC102 0.77 NIAGMN_20390 aroC chorismate synthase 0.73 NIAGMN_17310 yqfA hemolysin III family protein low > 80
Escherichia coli ECRC100 0.77 OKFHMN_22615 aroC chorismate synthase 0.73 OKFHMN_19545 yqfA hemolysin III family protein low > 79
Escherichia coli ECRC99 0.77 KEDOAH_05580 aroC chorismate synthase 0.73 KEDOAH_08595 yqfA hemolysin III family protein — —
Escherichia coli ECRC98 0.77 JDDGAC_26575 aroC chorismate synthase 0.73 JDDGAC_23185 yqfA hemolysin III family protein low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF1950 Chorismate synthase (EC 4.2.3.5) 0.74 GFF2997 COG1272: Predicted membrane protein hemolysin III homolog low > 78
Escherichia coli Nissle 1917 0.77 ECOLIN_RS13490 chorismate synthase 0.73 ECOLIN_RS16150 hemolysin III family protein — —
Escherichia coli ECRC62 0.77 BNILDI_13170 aroC chorismate synthase 0.73 BNILDI_10000 yqfA hemolysin III family protein low > 75
Escherichia coli ECOR27 0.77 NOLOHH_14250 aroC chorismate synthase 0.73 NOLOHH_11465 yqfA hemolysin III family protein low > 75
Enterobacter sp. TBS_079 0.77 MPMX20_03264 Chorismate synthase 0.76 MPMX20_03758 hypothetical protein low > 85
Alteromonas macleodii MIT1002 0.77 MIT1002_01229 Chorismate synthase 0.52 MIT1002_00886 hemolysin — —
Pectobacterium carotovorum WPP14 0.77 HER17_RS06935 chorismate synthase 0.64 HER17_RS17935 hemolysin III family protein low > 75
Shewanella loihica PV-4 0.77 Shew_2416 chorismate synthase (RefSeq) 0.48 Shew_2098 hemolysin III family channel protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.77 Shewana3_1469 chorismate synthase (RefSeq) 0.46 Shewana3_1934 hemolysin III family channel protein (RefSeq) low > 73
Serratia liquefaciens MT49 0.76 IAI46_18025 chorismate synthase 0.72 IAI46_20775 hemolysin III family protein low > 87
Rahnella sp. WP5 0.76 EX31_RS19685 chorismate synthase 0.69 EX31_RS21610 hemolysin III family protein — —
Dickeya dianthicola 67-19 0.76 HGI48_RS14530 chorismate synthase 0.68 HGI48_RS03410 hemolysin III family protein — —
Dickeya dianthicola ME23 0.76 DZA65_RS15465 chorismate synthase 0.67 DZA65_RS03455 hemolysin III family protein — —
Dickeya dadantii 3937 0.76 DDA3937_RS14580 chorismate synthase 0.74 DDA3937_RS03270 hemolysin III family protein — —
Klebsiella pneumoniae MRSN742743 0.76 GJGHJB_01448 aroC chorismate synthase 0.76 GJGHJB_00778 trhA PAQR family membrane homeostatis protein TrhA low > 83
Klebsiella pneumoniae MKP103 0.76 KDGMDA_27270 chorismate synthase 0.76 KDGMDA_04325 hemolysin III family protein low > 94
Pantoea agglomerans CFBP13505 P0401 0.75 PagCFBP13516_RS06340 aroC chorismate synthase 0.69 PagCFBP13516_RS04025 trhA PAQR family membrane homeostasis protein TrhA — —
Klebsiella michiganensis M5al 0.75 BWI76_RS20435 chorismate synthase 0.76 BWI76_RS23840 hemolysin III family protein low > 92
Pantoea sp. MT58 0.75 IAI47_06150 chorismate synthase 0.67 IAI47_03795 hemolysin III family protein — —
Erwinia amylovora T8 0.75 OLJFJH_11155 chorismate synthase 0.64 OLJFJH_08800 hemolysin III family protein — —
Pseudomonas stutzeri RCH2 0.69 Psest_1903 chorismate synthase 0.32 Psest_3779 channel protein, hemolysin III family — —
Pseudomonas protegens RBAN4 0.69 FABNJH_22480 aroC chorismate synthase 0.33 FABNJH_29285 Hemolysin D — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_1853 chorismate synthase 0.35 Psyr_0452 HylII — —
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS05215 chorismate synthase 0.38 QEN71_RS02270 hemolysin III family protein low > 153
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_1853 chorismate synthase 0.35 Psyr_0452 HylII — —
Paraburkholderia graminis OAS925 0.68 ABIE53_002916 chorismate synthase 0.38 ABIE53_003461 hemolysin III — —
Pseudomonas sp. SVBP6 0.68 COO64_RS06240 aroC chorismate synthase 0.35 COO64_RS13640 hemolysin III family protein — —
Pseudomonas sp. DMC3 0.68 GFF2631 Chorismate synthase 0.34 GFF181 hypothetical protein — —
Pseudomonas sp. RS175 0.68 PFR28_03126 Chorismate synthase 0.35 PFR28_04213 hypothetical protein — —
Pseudomonas sp. BP01 0.68 JOY50_RS15795 aroC chorismate synthase 0.35 JOY50_RS09760 hemolysin III family protein — —
Pseudomonas aeruginosa PUPa3 0.68 NPBIFN_03491 aroC chorismate synthase 0.33 NPBIFN_05141 Hemolysin III — —
Pseudomonas aeruginosa PA14 0.68 IKLFDK_08100 chorismate synthase 0.33 IKLFDK_29400 hemolysin III — —
Pseudomonas aeruginosa MRSN321 0.68 PFGADD_03455 aroC chorismate synthase 0.33 PFGADD_05065 Hemolysin III — —
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_19540 chorismate synthase 0.35 AO356_13560 hemolysin III — —
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5) 0.35 Pf6N2E2_4629 COG1272: Predicted membrane protein hemolysin III homolog — —
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_04489 chorismate synthase 0.37 H281DRAFT_04221 hemolysin III — —
Acinetobacter baumannii LAC-4 0.68 RR41_RS12715 chorismate synthase 0.42 RR41_RS03190 hemolysin III family protein — —
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) 0.34 PfGW456L13_1038 COG1272: Predicted membrane protein hemolysin III homolog low > 87
Pseudomonas putida KT2440 0.68 PP_1830 Chorismate synthase 0.37 PP_4986 Channel protein, hemolysin III family — —
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5) 0.34 Pf1N1B4_2371 COG1272: Predicted membrane protein hemolysin III homolog — —
Pseudomonas orientalis W4I3 0.67 QF045_RS21310 chorismate synthase 0.34 QF045_RS00960 hemolysin III family protein — —
Pseudomonas sp. S08-1 0.67 OH686_00675 chorismate synthase 0.34 OH686_06045 Predicted membrane protein, hemolysin III-related — —
Acinetobacter radioresistens SK82 0.67 MPMX26_01340 Chorismate synthase 0.45 MPMX26_00606 hypothetical protein — —
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS08040 chorismate synthase 0.44 ABZR86_RS18160 hemolysin III family protein low > 74
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS13705 chorismate synthase 0.38 BPHYT_RS16440 hemolysin D low > 109
Pseudomonas fluorescens SBW25 0.67 PFLU_RS21280 chorismate synthase 0.34 PFLU_RS28225 hemolysin III family protein — —
Pseudomonas lactucae CFBP13502 0.67 GEMAOFIL_02034 Chorismate synthase 0.35 GEMAOFIL_05445 hypothetical protein — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS21280 chorismate synthase 0.34 PFLU_RS28225 hemolysin III family protein — —
Pseudomonas simiae WCS417 0.67 PS417_19315 chorismate synthase 0.34 PS417_26570 hemolysin III — —
Acidovorax sp. GW101-3H11 0.67 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) 0.38 Ac3H11_4296 COG1272: Predicted membrane protein hemolysin III homolog low > 79
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_02250 chorismate synthase 0.33 AO353_08075 hemolysin III low > 101
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS13790 chorismate synthase 0.32 ABZR87_RS02015 hemolysin III family protein low > 80
Rhodanobacter sp000427505 FW510-R12 0.66 LRK53_RS08310 chorismate synthase 0.45 LRK53_RS17430 hemolysin III family protein low > 59
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_04805 aroC chorismate synthase 0.45 OKGIIK_00475 yqfA putative membrane channel-forming protein YqfA, hemolysin III family low > 53
Rhodanobacter denitrificans MT42 0.65 LRK55_RS01505 chorismate synthase 0.44 LRK55_RS05890 hemolysin III family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS01725 chorismate synthase 0.44 LRK54_RS06145 hemolysin III family protein — —
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) 0.40 Xcc-8004.1589.1 COG1272: Predicted membrane protein hemolysin III homolog low > 74
Lysobacter sp. OAE881 0.63 ABIE51_RS08220 chorismate synthase 0.39 ABIE51_RS16230 hemolysin III family protein — —
Variovorax sp. SCN45 0.61 GFF2627 Chorismate synthase (EC 4.2.3.5) 0.32 GFF5671 FIG01964566: Predicted membrane protein, hemolysin III homolog low > 127
Variovorax sp. OAS795 0.61 ABID97_RS19805 chorismate synthase 0.36 ABID97_RS07605 hemolysin III family protein — —
Azospirillum sp. SherDot2 0.59 MPMX19_01810 Chorismate synthase 0.29 MPMX19_02364 hypothetical protein — —
Rhodospirillum rubrum S1H 0.59 Rru_A2623 Chorismate synthase (NCBI) 0.30 Rru_A0661 Hly-III related proteins (NCBI) — —
Cellulophaga baltica 18 0.53 M666_RS15545 chorismate synthase 0.36 M666_RS10220 hemolysin III family protein — —
Desulfovibrio vulgaris Hildenborough JW710 0.52 DVU0894 aroC chorismate synthase (TIGR) 0.30 DVU3295 hemolysin III (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_1408 chorismate synthase (RefSeq) 0.32 DvMF_2247 channel protein, hemolysin III family (RefSeq) — —
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_2433 chorismate synthase (EC 4.2.3.5) 0.47 B158DRAFT_1582 channel protein, hemolysin III family low > 40
Agrobacterium fabrum C58 0.49 Atu0754 chorismate synthase 0.34 Atu0906 Hemolysin III — —
Parabacteroides merdae CL09T00C40 0.48 HMPREF1078_RS16710 chorismate synthase 0.34 HMPREF1078_RS01905 hemolysin III family protein low > 61
Bacteroides thetaiotaomicron VPI-5482 0.47 BT2084 chorismate synthase (NCBI ptt file) 0.27 BT1983 hemolysin III (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.46 BACOVA_03296 chorismate synthase 0.28 BACOVA_00687 hypothetical protein low > 96

Not shown: 42 genomes with orthologs for CSW01_10560 only; 1 genomes with orthologs for CSW01_00205 only