| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS06780 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 1.0 | BWI76_RS25230 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.46 | 9 |
| Enterobacter sp. TBS_079 | 0.87 | MPMX20_01065 | | Multidrug efflux pump subunit AcrA | 0.86 | MPMX20_04101 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | low | > 85 |
| Enterobacter asburiae PDN3 | 0.84 | EX28DRAFT_2495 | | RND family efflux transporter, MFP subunit | 0.87 | EX28DRAFT_3249 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.83 | OHPLBJKB_03211 | | Multidrug efflux pump subunit AcrA | 0.84 | OHPLBJKB_00505 | | putative phospholipid import ATP-binding protein MlaF | 0.41 | 35 |
| Escherichia coli ECRC100 | 0.83 | OKFHMN_08200 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | OKFHMN_17975 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | low | > 80 |
| Escherichia coli ECRC101 | 0.83 | MCAODC_27425 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | MCAODC_08495 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | low | > 87 |
| Escherichia coli ECRC99 | 0.83 | KEDOAH_19765 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | KEDOAH_10175 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | — | — |
| Escherichia coli BW25113 | 0.83 | b0463 | acrA | multidrug efflux system (NCBI) | 0.84 | b3195 | yrbF | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | 0.36 | 16 |
| Escherichia coli ECRC98 | 0.83 | JDDGAC_11850 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | JDDGAC_21600 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | low | > 86 |
| Escherichia coli ECRC102 | 0.83 | NIAGMN_06255 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | NIAGMN_15735 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | — | — |
| Escherichia coli BL21 | 0.83 | ECD_00414 | | multidrug efflux system | 0.84 | ECD_03060 | | ABC transporter maintaining OM lipid asymmetry, ATP-binding protein | low | > 61 |
| Escherichia coli ECRC62 | 0.83 | BNILDI_22550 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | BNILDI_01760 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | low | > 75 |
| Escherichia coli ECOR27 | 0.83 | NOLOHH_01135 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | NOLOHH_09775 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | low | > 75 |
| Escherichia coli Nissle 1917 | 0.82 | ECOLIN_RS02755 | | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | ECOLIN_RS18390 | | phospholipid ABC transporter ATP-binding protein MlaF | — | — |
| Escherichia coli ECOR38 | 0.82 | HEPCGN_06815 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | HEPCGN_16850 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | low | > 87 |
| Escherichia fergusonii Becca | 0.82 | EFB2_03595 | | Multidrug efflux pump subunit AcrA | 0.84 | EFB2_00628 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.78 | GFF4380 | | Membrane fusion protein of RND family multidrug efflux pump | 0.85 | GFF2939 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | low | > 78 |
| Pantoea sp. MT58 | 0.74 | IAI47_14510 | | efflux RND transporter periplasmic adaptor subunit | 0.82 | IAI47_17145 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.42 | 42 |
| Rahnella sp. WP5 | 0.74 | EX31_RS22475 | | efflux RND transporter periplasmic adaptor subunit | 0.79 | EX31_RS12435 | | phospholipid ABC transporter ATP-binding protein MlaF | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.74 | LU632_RS18180 | | efflux RND transporter periplasmic adaptor subunit | 0.80 | LU632_RS21245 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | — | — |
| Serratia liquefaciens MT49 | 0.74 | IAI46_05190 | | multidrug efflux RND transporter periplasmic adaptor subunit SdeX | 0.77 | IAI46_22430 | | phospholipid ABC transporter ATP-binding protein MlaF | low | > 86 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS05740 | | efflux RND transporter periplasmic adaptor subunit | 0.78 | DDA3937_RS01565 | | phospholipid ABC transporter ATP-binding protein MlaF | low | > 74 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS05795 | | efflux RND transporter periplasmic adaptor subunit | 0.77 | HGI48_RS01480 | | phospholipid ABC transporter ATP-binding protein MlaF | low | > 71 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS06120 | | efflux RND transporter periplasmic adaptor subunit | 0.77 | DZA65_RS01545 | | phospholipid ABC transporter ATP-binding protein MlaF | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | 0.77 | HER17_RS20025 | | phospholipid ABC transporter ATP-binding protein MlaF | low | > 75 |
| Pseudomonas fluorescens FW300-N2E2 | 0.51 | Pf6N2E2_2823 | | Multidrug efflux RND membrane fusion protein MexC | 0.63 | Pf6N2E2_3260 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_04875 | | antibiotic transporter | 0.63 | AO356_07005 | | ABC transporter ATP-binding protein | low | > 104 |
| Pseudomonas sp. RS175 | 0.51 | PFR28_00632 | | putative efflux pump periplasmic linker TtgA | 0.64 | PFR28_00179 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_4007 | | Secretion protein HlyD | 0.63 | Psyr_4141 | | ABC transporter | 0.30 | 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_4007 | | Secretion protein HlyD | 0.63 | Psyr_4141 | | ABC transporter | low | > 86 |
| Pseudomonas sp. S08-1 | 0.50 | OH686_16045 | | Multidrug efflux system, membrane fusion component | 0.62 | OH686_08510 | | Phospholipid ABC transporter ATP-binding protein MlaF | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_0309 | | RND family efflux transporter, MFP subunit | 0.63 | Psest_3307 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | 0.24 | 52 |
| Pseudomonas fluorescens SBW25-INTG | 0.48 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | 0.62 | PFLU_RS04430 | | ATP-binding cassette domain-containing protein | 0.32 | 49 |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_4580 | | Multidrug efflux RND membrane fusion protein MexC | 0.63 | PfGW456L13_5008 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.48 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | 0.62 | PFLU_RS04430 | | ATP-binding cassette domain-containing protein | 0.59 | 82 |
| Pseudomonas simiae WCS417 | 0.48 | PS417_06775 | | antibiotic transporter | 0.62 | PS417_04375 | | ABC transporter ATP-binding protein | low | > 88 |
| Pseudomonas putida KT2440 | 0.48 | PP_1386 | | Probable efflux pump periplasmic linker TtgA | 0.62 | PP_0958 | | phospholipid ABC transporter ATP-binding subunit | 0.46 | 7 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_3247 | | Multidrug efflux RND membrane fusion protein MexC | 0.60 | Pf1N1B4_1074 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.1793.1 | | RND efflux system, membrane fusion protein CmeA | 0.46 | Xcc-8004.5363.1 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | low | > 74 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_17300 | | antibiotic transporter | 0.62 | AO353_05150 | | ABC transporter ATP-binding protein | 0.39 | 46 |
| Herbaspirillum seropedicae SmR1 | 0.47 | HSERO_RS06810 | | hemolysin D | 0.54 | HSERO_RS20400 | | toluene ABC transporter ATP-binding protein | — | — |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS34600 | | hemolysin D | 0.55 | BPHYT_RS17765 | | toluene ABC transporter ATP-binding protein | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS29870 | | efflux RND transporter periplasmic adaptor subunit | 0.55 | QEN71_RS27920 | | ABC transporter ATP-binding protein | 0.49 | 111 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS18280 | | efflux RND transporter periplasmic adaptor subunit | 0.55 | ABZR86_RS11885 | | ATP-binding cassette domain-containing protein | low | > 74 |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS32415 | | hemolysin D | 0.58 | RR42_RS18970 | | toluene ABC transporter ATP-binding protein | low | > 128 |
| Rhodospirillum rubrum S1H | 0.45 | Rru_A2050 | | Secretion protein HlyD (NCBI) | 0.33 | Rru_A2446 | | ABC transporter component (NCBI) | low | > 58 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_01000 | | membrane fusion protein, multidrug efflux system | 0.56 | H281DRAFT_05641 | | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein | low | > 103 |
| Shewanella amazonensis SB2B | 0.44 | Sama_3553 | | multidrug resistance protein AcrA/AcrE family (RefSeq) | 0.69 | Sama_3081 | | ABC transporter, ATP-binding protein, putative (RefSeq) | low | > 62 |
| Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS19790 | | efflux RND transporter periplasmic adaptor subunit | 0.50 | RALBFv3_RS06900 | | ABC transporter ATP-binding protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.44 | UW163_RS19385 | | efflux RND transporter periplasmic adaptor subunit | 0.50 | UW163_RS06715 | | ABC transporter ATP-binding protein | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.44 | DVU2817 | acrA | multidrug resistance protein (TIGR) | 0.34 | DVU1245 | | ABC transporter, ATP-binding protein (TIGR) | low | > 55 |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS05310 | | efflux RND transporter periplasmic adaptor subunit | 0.53 | ABZR87_RS02555 | | ABC transporter ATP-binding protein | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.44 | RS_RS21035 | | efflux RND transporter periplasmic adaptor subunit | 0.52 | RS_RS14845 | | ABC transporter ATP-binding protein | low | > 80 |
| Shewanella oneidensis MR-1 | 0.44 | SO4693 | | multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) | 0.68 | SO3954 | | ABC transporter, ATP-binding protein, putative (NCBI ptt file) | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS23900 | | efflux RND transporter periplasmic adaptor subunit | 0.52 | RPSI07_RS10335 | | ABC transporter ATP-binding protein | low | > 81 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_4046 | | RND family efflux transporter MFP subunit (RefSeq) | 0.68 | Shewana3_0678 | | ABC transporter related (RefSeq) | low | > 73 |
| Rhizobium sp. OAE497 | 0.43 | ABIE40_RS24220 | | efflux RND transporter periplasmic adaptor subunit | 0.28 | ABIE40_RS10425 | | ABC transporter ATP-binding protein | low | > 107 |
| Rhodopseudomonas palustris CGA009 | 0.43 | TX73_012250 | | efflux RND transporter periplasmic adaptor subunit | 0.30 | TX73_020525 | | ABC transporter ATP-binding protein | low | > 86 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_00690 | | Multidrug efflux pump subunit AcrA | 0.62 | MPMX26_02741 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | low | > 36 |
| Variovorax sp. OAS795 | 0.38 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | 0.57 | ABID97_RS23215 | | ABC transporter ATP-binding protein | 0.55 | 20 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.38 | GFF5686 | | RND efflux system, membrane fusion protein CmeA | 0.58 | GFF1325 | | Methionine ABC transporter ATP-binding protein | low | > 90 |
| Agrobacterium fabrum C58 | 0.37 | Atu3203 | | RND multidrug efflux membrane permease | 0.32 | Atu1646 | | ABC transporter, nucleotide binding/ATPase protein | low | > 89 |
| Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_4449 | | RND efflux system, membrane fusion protein CmeA | 0.55 | Ac3H11_4712 | | Methionine ABC transporter ATP-binding protein | low | > 79 |
| Rhodanobacter sp. FW510-T8 | 0.34 | OKGIIK_09165 | acrA | efflux transporter periplasmic adaptor subunit | 0.56 | OKGIIK_12135 | mlaF | ABC transporter ATP-binding protein | low | > 52 |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS04230 | | efflux RND transporter periplasmic adaptor subunit | 0.43 | ABCV34_RS11180 | | ABC transporter ATP-binding protein | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.31 | LRK54_RS02095 | | efflux RND transporter periplasmic adaptor subunit | 0.54 | LRK54_RS11760 | | ATP-binding cassette domain-containing protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.31 | LRK55_RS01870 | | efflux RND transporter periplasmic adaptor subunit | 0.54 | LRK55_RS11485 | | ATP-binding cassette domain-containing protein | low | > 63 |
| Lysobacter sp. OAE881 | 0.30 | ABIE51_RS17985 | | efflux RND transporter periplasmic adaptor subunit | 0.43 | ABIE51_RS01015 | | ABC transporter ATP-binding protein | low | > 62 |
| Desulfovibrio vulgaris Miyazaki F | 0.28 | DvMF_2164 | | efflux transporter, RND family, MFP subunit (RefSeq) | 0.32 | DvMF_0853 | | ABC transporter related (RefSeq) | low | > 51 |
Not shown: 5 genomes with orthologs for BWI76_RS06780 only; 15 genomes with orthologs for BWI76_RS25230 only