Conservation of cofitness between BPHYT_RS13220 and BPHYT_RS17890 in Burkholderia phytofirmans PsJN

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13220 phosphomethylpyrimidine synthase 1.0 BPHYT_RS17890 shikimate kinase 0.71 8
Paraburkholderia graminis OAS925 0.99 ABIE53_002857 phosphomethylpyrimidine synthase 0.97 ABIE53_003741 shikimate kinase — —
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.98 H281DRAFT_05614 shikimate kinase — —
Paraburkholderia sabiae LMG 24235 0.95 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.92 QEN71_RS28040 shikimate kinase 0.86 9
Dechlorosoma suillum PS 0.85 Dsui_0422 thiamine biosynthesis protein ThiC 0.53 Dsui_1094 shikimate kinase — —
Castellaniella sp019104865 MT123 0.78 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.42 ABCV34_RS12700 shikimate kinase — —
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC 0.37 ABZR86_RS10475 shikimate kinase 0.32 73
Marinobacter adhaerens HP15 0.75 HP15_453 thiamine biosynthesis protein thiC 0.40 HP15_479 shikimate kinase I — —
Pseudomonas putida KT2440 0.75 PP_4922 Phosphomethylpyrimidine synthase 0.43 PP_5079 Shikimate kinase — —
Pseudomonas sp. S08-1 0.74 OH686_15885 phosphomethylpyrimidine synthase 0.44 OH686_10020 Shikimate kinase I low > 80
Pseudomonas stutzeri RCH2 0.74 Psest_0477 thiamine biosynthesis protein ThiC 0.47 Psest_3714 Shikimate kinase — —
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.1066.1 hypothetical protein 0.32 Xcc-8004.1616.1 Shikimate kinase I (EC 2.7.1.71) low > 74
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_08810 thiamine biosynthesis protein ThiC 0.43 AO356_09390 shikimate kinase — —
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_13010 thiamine biosynthesis protein ThiC 0.43 AO353_12500 shikimate kinase low > 101
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.44 PFLU_RS02025 shikimate kinase AroK — —
Pseudomonas fluorescens SBW25 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.44 PFLU_RS02025 shikimate kinase AroK — —
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.44 Psyr_0408 shikimate kinase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.44 Psyr_0408 shikimate kinase — —
Pseudomonas simiae WCS417 0.73 PS417_02355 thiamine biosynthesis protein ThiC 0.44 PS417_01980 shikimate kinase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.72 ABZR88_RS08840 phosphomethylpyrimidine synthase ThiC 0.21 ABZR88_RS19855 shikimate kinase — —
Acinetobacter radioresistens SK82 0.71 MPMX26_00180 Phosphomethylpyrimidine synthase 0.49 MPMX26_02811 Shikimate kinase 1 — —
Ralstonia solanacearum PSI07 0.69 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.70 RPSI07_RS10295 shikimate kinase low > 81
Pectobacterium carotovorum WPP14 0.69 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.44 HER17_RS01775 shikimate kinase AroK — —
Shewanella loihica PV-4 0.69 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.45 Shew_0213 shikimate kinase I (RefSeq) — —
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.74 ABZR87_RS02595 shikimate kinase low > 80
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS01290 thiamine biosynthesis protein ThiC 0.72 RR42_RS19010 shikimate kinase 0.60 35
Ralstonia solanacearum UW163 0.68 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.70 UW163_RS06675 shikimate kinase — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.70 RALBFv3_RS06940 shikimate kinase low > 76
Shewanella amazonensis SB2B 0.68 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) 0.45 Sama_3368 aroK shikimate kinase I (RefSeq) — —
Rahnella sp. WP5 0.68 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.44 EX31_RS04725 shikimate kinase AroK low > 89
Ralstonia solanacearum GMI1000 0.68 RS_RS00555 phosphomethylpyrimidine synthase 0.71 RS_RS14885 shikimate kinase 0.64 8
Enterobacter sp. TBS_079 0.68 MPMX20_00217 Phosphomethylpyrimidine synthase 0.44 MPMX20_04279 Shikimate kinase 1 low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4198 Thiamin biosynthesis protein ThiC 0.40 GFF629 Shikimate kinase I (EC 2.7.1.71) low > 78
Serratia liquefaciens MT49 0.67 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.43 IAI46_23705 shikimate kinase AroK — —
Enterobacter asburiae PDN3 0.67 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.44 EX28DRAFT_4152 shikimate kinase (EC 2.7.1.71) low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.43 ECOLIN_RS19365 shikimate kinase AroK — —
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0295 hydroxymethylpyrimidine synthase 0.43 B158DRAFT_0763 shikimate kinase (EC 2.7.1.71) — —
Escherichia fergusonii Becca 0.67 EFB2_04617 Phosphomethylpyrimidine synthase 0.43 EFB2_00438 Shikimate kinase 1 low > 86
Escherichia coli ECOR27 0.67 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.43 NOLOHH_08900 aroK shikimate kinase AroK low > 75
Escherichia coli ECRC62 0.67 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.43 BNILDI_02620 aroK shikimate kinase AroK — —
Escherichia coli BW25113 0.67 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.43 b3390 aroK shikimate kinase I (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.43 OHPLBJKB_00313 Shikimate kinase 1 — —
Escherichia coli BL21 0.67 ECD_03871 phosphomethylpyrimidine synthase 0.43 ECD_03242 shikimate kinase I low > 61
Escherichia coli ECOR38 0.67 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.43 HEPCGN_15930 aroK shikimate kinase AroK low > 87
Pantoea sp. MT58 0.67 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.43 IAI47_01890 shikimate kinase AroK — —
Klebsiella michiganensis M5al 0.67 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.43 BWI76_RS26090 shikimate kinase — —
Dickeya dadantii 3937 0.67 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.38 DDA3937_RS19550 shikimate kinase AroK — —
Variovorax sp. SCN45 0.67 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.44 GFF5324 Shikimate kinase I (EC 2.7.1.71) low > 127
Erwinia tracheiphila SCR3 0.67 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.44 LU632_RS22870 aroK shikimate kinase AroK — —
Shewanella oneidensis MR-1 0.67 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) 0.45 SO0286 aroK shikimate kinase (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_00335 phosphomethylpyrimidine synthase 0.44 CSW01_13305 shikimate kinase low > 62
Alteromonas macleodii MIT1002 0.66 MIT1002_00097 Phosphomethylpyrimidine synthase 0.45 MIT1002_00448 Shikimate kinase 1 — —
Shewanella sp. ANA-3 0.66 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) 0.44 Shewana3_3894 aroK shikimate kinase I (RefSeq) — —
Dickeya dianthicola ME23 0.66 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.38 DZA65_RS20765 shikimate kinase AroK — —
Dickeya dianthicola 67-19 0.66 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.38 HGI48_RS19680 shikimate kinase AroK — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.56 GFF1332 Shikimate kinase I (EC 2.7.1.71) low > 90
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.49 Ac3H11_3449 Shikimate kinase I (EC 2.7.1.71) 0.93 8
Variovorax sp. OAS795 0.65 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.48 ABID97_RS23260 shikimate kinase — —
Phaeobacter inhibens DSM 17395 0.62 PGA1_c09110 thiamine biosynthesis protein ThiC 0.40 PGA1_c14090 shikimate kinase AroK — —
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_2424 hydroxymethylpyrimidine synthase 0.31 Ga0059261_3592 shikimate kinase (EC 2.7.1.71) — —
Dinoroseobacter shibae DFL-12 0.62 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) 0.37 Dshi_1609 Shikimate kinase (RefSeq) — —
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.29 CCNA_03103 shikimate kinase low > 67
Caulobacter crescentus NA1000 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.29 CCNA_03103 shikimate kinase (EC 2.7.1.71) (from data) low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS15715 phosphomethylpyrimidine synthase ThiC 0.30 A4249_RS04170 shikimate kinase — —
Mycobacterium tuberculosis H37Rv 0.51 Rv0423c Probable thiamine biosynthesis protein ThiC 0.24 Rv2539c Shikimate kinase AroK (SK) — —

Not shown: 29 genomes with orthologs for BPHYT_RS13220 only; 3 genomes with orthologs for BPHYT_RS17890 only