| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS09505 | | carbohydrate kinase | 1.0 | BPHYT_RS12635 | | translation factor Sua5 | 0.48 | 14 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.87 | H281DRAFT_00907 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.96 | H281DRAFT_00505 | | tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.83 | ABIE53_002139 | | hydroxyethylthiazole kinase-like uncharacterized protein yjeF | 0.95 | ABIE53_002753 | | tRNA threonylcarbamoyl adenosine modification protein (Sua5/YciO/YrdC/YwlC family) | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.65 | QEN71_RS21930 | | NAD(P)H-hydrate dehydratase | 0.93 | QEN71_RS05920 | | L-threonylcarbamoyladenylate synthase | low | > 153 |
| Ralstonia solanacearum UW163 | 0.35 | UW163_RS14605 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.70 | UW163_RS12340 | | threonylcarbamoyl-AMP synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.35 | RALBFv3_RS01295 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.70 | RALBFv3_RS14870 | | threonylcarbamoyl-AMP synthase | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.35 | RPSI07_RS16180 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.71 | RPSI07_RS18490 | | threonylcarbamoyl-AMP synthase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.35 | ABZR87_RS12740 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.70 | ABZR87_RS10525 | | L-threonylcarbamoyladenylate synthase | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.35 | RS_RS08700 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.69 | RS_RS05680 | | threonylcarbamoyl-AMP synthase | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.34 | HSERO_RS11180 | | sugar kinase | 0.70 | HSERO_RS16410 | | translation factor Sua5 | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.33 | RR42_RS09070 | | carbohydrate kinase | 0.68 | RR42_RS06230 | | hypothetical protein | low | > 128 |
| Acidovorax sp. GW101-3H11 | 0.26 | Ac3H11_415 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.67 | Ac3H11_1753 | | TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA | low | > 79 |
| Rahnella sp. WP5 | 0.26 | EX31_RS08845 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | EX31_RS09945 | | threonylcarbamoyl-AMP synthase | low | > 89 |
| Klebsiella michiganensis M5al | 0.25 | BWI76_RS02510 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.54 | BWI76_RS11870 | | hypothetical protein | low | > 92 |
| Variovorax sp. OAS795 | 0.25 | ABID97_RS17190 | | NAD(P)H-hydrate dehydratase | 0.67 | ABID97_RS22605 | | L-threonylcarbamoyladenylate synthase | low | > 91 |
| Escherichia coli ECRC100 | 0.25 | OKFHMN_12280 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | OKFHMN_02640 | yciO | L-threonylcarbamoyladenylate synthase | low | > 80 |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_15875 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | KEDOAH_26110 | yciO | L-threonylcarbamoyladenylate synthase | — | — |
| Enterobacter sp. TBS_079 | 0.25 | MPMX20_00448 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.54 | MPMX20_02508 | | putative protein YciO | low | > 85 |
| Escherichia coli ECRC101 | 0.25 | MCAODC_02795 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | MCAODC_15625 | yciO | L-threonylcarbamoyladenylate synthase | low | > 87 |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_10130 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | NIAGMN_26810 | yciO | L-threonylcarbamoyladenylate synthase | — | — |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_15920 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | JDDGAC_05185 | yciO | L-threonylcarbamoyladenylate synthase | low | > 86 |
| Escherichia fergusonii Becca | 0.24 | EFB2_04368 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.55 | EFB2_02660 | | putative protein YciO | low | > 86 |
| Escherichia coli BW25113 | 0.24 | b4167 | yjeF | predicted carbohydrate kinase (NCBI) | 0.55 | b1267 | yciO | orf, hypothetical protein (VIMSS) | — | — |
| Escherichia coli BL21 | 0.24 | ECD_04034 | | bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase | 0.55 | ECD_01241 | | putative RNA binding protein | low | > 61 |
| Escherichia coli ECRC62 | 0.24 | BNILDI_06945 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | BNILDI_18450 | yciO | L-threonylcarbamoyladenylate synthase | low | > 75 |
| Escherichia coli ECOR27 | 0.24 | NOLOHH_04545 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | NOLOHH_20300 | yciO | L-threonylcarbamoyladenylate synthase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.24 | OHPLBJKB_03875 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.55 | OHPLBJKB_02417 | | putative protein YciO | low | > 73 |
| Escherichia coli ECOR38 | 0.24 | HEPCGN_10510 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | HEPCGN_25550 | yciO | L-threonylcarbamoyladenylate synthase | low | > 87 |
| Escherichia coli Nissle 1917 | 0.24 | ECOLIN_RS24205 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | ECOLIN_RS07625 | | L-threonylcarbamoyladenylate synthase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.24 | GFF820 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.55 | GFF2720 | | Hypothetical YciO protein, TsaC/YrdC paralog | low | > 78 |
| Variovorax sp. SCN45 | 0.24 | GFF397 | | NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) | 0.68 | GFF5789 | | YciO protein, TsaC/YrdC paralog | low | > 127 |
| Enterobacter asburiae PDN3 | 0.24 | EX28DRAFT_3364 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.54 | EX28DRAFT_0939 | | tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.24 | HER17_RS02560 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.54 | HER17_RS10905 | | threonylcarbamoyl-AMP synthase | low | > 75 |
| Serratia liquefaciens MT49 | 0.24 | IAI46_01600 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | IAI46_14010 | | threonylcarbamoyl-AMP synthase | low | > 86 |
| Dechlorosoma suillum PS | 0.23 | Dsui_2898 | | yjeF-like protein, hydroxyethylthiazole kinase-related protein | 0.65 | Dsui_2730 | | Sua5/YciO/YrdC/YwlC family protein | — | — |
| Dickeya dianthicola 67-19 | 0.23 | HGI48_RS18570 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | HGI48_RS10495 | | threonylcarbamoyl-AMP synthase | low | > 71 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF4918 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.66 | GFF110 | | Hypothetical YciO protein, TsaC/YrdC paralog | low | > 90 |
| Erwinia tracheiphila SCR3 | 0.23 | LU632_RS02030 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.54 | LU632_RS12745 | | threonylcarbamoyl-AMP synthase | low | > 74 |
| Pseudomonas stutzeri RCH2 | 0.22 | Psest_0678 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.56 | Psest_1888 | | Sua5/YciO/YrdC/YwlC family protein | low | > 67 |
| Dickeya dianthicola ME23 | 0.22 | DZA65_RS19705 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | DZA65_RS10975 | | threonylcarbamoyl-AMP synthase | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.22 | CSW01_14940 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.54 | CSW01_05965 | | threonylcarbamoyl-AMP synthase | low | > 62 |
| Pantoea sp. MT58 | 0.22 | IAI47_02565 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.53 | IAI47_09200 | | threonylcarbamoyl-AMP synthase | low | > 76 |
| Shewanella oneidensis MR-1 | 0.22 | SO0598 | yjeF | yjeF protein (NCBI ptt file) | 0.48 | SO3016 | | Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.21 | Shewana3_0592 | | carbohydrate kinase, YjeF related protein (RefSeq) | 0.47 | Shewana3_1522 | | translation factor SUA5 (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.21 | Shew_0561 | | carbohydrate kinase, YjeF-related protein (RefSeq) | 0.50 | Shew_2249 | | Sua5/YciO/YrdC/YwlC family protein (RefSeq) | low | > 60 |
| Pseudomonas fluorescens FW300-N2E3 | 0.21 | AO353_13120 | | carbohydrate kinase | 0.59 | AO353_18525 | | hypothetical protein | low | > 101 |
| Alteromonas macleodii MIT1002 | 0.21 | MIT1002_03793 | | Nicotinamide nucleotide repair protein | 0.56 | MIT1002_01432 | | t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN | low | > 70 |
| Shewanella amazonensis SB2B | 0.21 | Sama_3030 | | YjeF protein (RefSeq) | 0.52 | Sama_2127 | | Sua5/YciO/YrdC/YwlC family protein (RefSeq) | low | > 62 |
| Pseudomonas sp. RS175 | 0.20 | PFR28_05116 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.58 | PFR28_03318 | | putative protein YciO | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.20 | Pf1N1B4_1417 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.59 | Pf1N1B4_3552 | | Hypothetical YciO protein, TsaC/YrdC paralog | low | > 87 |
| Pseudomonas sp. S08-1 | 0.20 | OH686_09495 | | NAD(P)H-hydrate epimerase / ADP-dependent (S)-NAD(P)H-hydrate dehydratase | 0.57 | OH686_20800 | | tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family | low | > 80 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.20 | CA264_16280 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.34 | CA264_02115 | | threonylcarbamoyl-AMP synthase | low | > 74 |
| Pseudomonas fluorescens FW300-N2E2 | 0.20 | Pf6N2E2_3619 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.58 | Pf6N2E2_5626 | | Hypothetical YciO protein, TsaC/YrdC paralog | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.19 | AO356_08680 | | carbohydrate kinase | 0.58 | AO356_18500 | | hypothetical protein | low | > 104 |
| Phocaeicola dorei CL03T12C01 | 0.19 | ABI39_RS08310 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.33 | ABI39_RS10130 | | threonylcarbamoyl-AMP synthase | low | > 72 |
| Bacteroides stercoris CC31F | 0.19 | HMPREF1181_RS06260 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.30 | HMPREF1181_RS06425 | | threonylcarbamoyl-AMP synthase | low | > 56 |
| Phocaeicola vulgatus CL09T03C04 | 0.19 | HMPREF1058_RS00705 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.33 | HMPREF1058_RS14510 | | threonylcarbamoyl-AMP synthase | low | > 67 |
| Dickeya dadantii 3937 | 0.19 | DDA3937_RS18635 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | DDA3937_RS10495 | | threonylcarbamoyl-AMP synthase | low | > 74 |
| Pseudomonas fluorescens GW456-L13 | 0.19 | PfGW456L13_159 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.57 | PfGW456L13_4404 | | Hypothetical YciO protein, TsaC/YrdC paralog | low | > 87 |
| Parabacteroides merdae CL09T00C40 | 0.19 | HMPREF1078_RS15325 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.33 | HMPREF1078_RS05180 | | L-threonylcarbamoyladenylate synthase | low | > 61 |
| Kangiella aquimarina DSM 16071 | 0.18 | B158DRAFT_1947 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.53 | B158DRAFT_2305 | | translation factor SUA5 | low | > 40 |
| Bacteroides ovatus ATCC 8483 | 0.18 | BACOVA_05215 | | YjeF domain protein | 0.32 | BACOVA_04938 | | Sua5/YciO/YrdC/YwlC family protein | low | > 94 |
| Marinobacter adhaerens HP15 | 0.18 | HP15_2504 | | carbohydrate kinase, YjeF related protein | 0.61 | HP15_1188 | | Sua5/YciO/YrdC/YwlC family protein | low | > 73 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.18 | BT4383 | | putative sugar kinase (NCBI ptt file) | 0.33 | BT4128 | | conserved hypothetical protein (NCBI ptt file) | low | > 81 |
| Pseudomonas syringae pv. syringae B728a | 0.18 | Psyr_0567 | | Protein of unknown function UPF0031:YjeF-related protein, N-terminal | 0.55 | Psyr_3585 | | Sua5/YciO/YrdC/YwlC | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.18 | Psyr_0567 | | Protein of unknown function UPF0031:YjeF-related protein, N-terminal | 0.55 | Psyr_3585 | | Sua5/YciO/YrdC/YwlC | low | > 86 |
| Acinetobacter radioresistens SK82 | 0.17 | MPMX26_01782 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.50 | MPMX26_02446 | | putative protein YciO | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.17 | Echvi_0073 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.34 | Echvi_0371 | | Sua5/YciO/YrdC/YwlC family protein | low | > 79 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.17 | ABZR88_RS18865 | | NAD(P)H-hydrate dehydratase | 0.34 | ABZR88_RS07615 | | L-threonylcarbamoyladenylate synthase | low | > 71 |
| Castellaniella sp019104865 MT123 | 0.16 | ABCV34_RS02980 | | NAD(P)H-hydrate dehydratase | 0.59 | ABCV34_RS15815 | | L-threonylcarbamoyladenylate synthase | low | > 48 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.16 | CA265_RS24885 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.36 | CA265_RS05100 | | threonylcarbamoyl-AMP synthase | low | > 88 |
| Synechococcus elongatus PCC 7942 | 0.13 | Synpcc7942_1273 | | hypothetical protein | 0.32 | Synpcc7942_2350 | | translation factor SUA5 | low | > 38 |
Not shown: 21 genomes with orthologs for BPHYT_RS09505 only; 4 genomes with orthologs for BPHYT_RS12635 only