Conservation of cofitness between BPHYT_RS12840 and BPHYT_RS04945 in Burkholderia phytofirmans PsJN

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS12840 pyruvate dehydrogenase 1.0 BPHYT_RS04945 membrane protein 0.66 18
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_00466 pyruvate dehydrogenase E1 component 0.85 H281DRAFT_00153 autotransporter secretion outer membrane protein TamA
Paraburkholderia graminis OAS925 0.97 ABIE53_002793 pyruvate dehydrogenase E1 component 0.87 ABIE53_001263 translocation and assembly module TamA
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS05725 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.81 QEN71_RS25050 autotransporter assembly complex family protein
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS13470 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.45 ABZR87_RS00015 autotransporter assembly complex family protein
Cupriavidus basilensis FW507-4G11 0.82 RR42_RS07365 pyruvate dehydrogenase 0.43 RR42_RS16040 membrane protein low > 128
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS01670 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.44 RALBFv3_RS04420 outer membrane protein assembly factor
Ralstonia solanacearum PSI07 0.81 RPSI07_RS15815 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.44 RPSI07_RS12950 outer membrane protein assembly factor
Ralstonia solanacearum UW163 0.81 UW163_RS14980 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.44 UW163_RS09250 outer membrane protein assembly factor
Ralstonia solanacearum GMI1000 0.81 RS_RS08055 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.44 RS_RS11970 outer membrane protein assembly factor
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS07305 pyruvate dehydrogenase 0.49 HSERO_RS07725 membrane protein
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3674 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.14 Pf6N2E2_144 Uncharacterized protein YtfM precursor
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_08960 pyruvate dehydrogenase 0.14 AO356_01050 hypothetical protein
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_214 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.15 PfGW456L13_2601 Uncharacterized protein YtfM precursor
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1476 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.15 Pf1N1B4_3997 Uncharacterized protein YtfM precursor
Pseudomonas sp. RS175 0.64 PFR28_05061 Pyruvate dehydrogenase E1 component 0.14 PFR28_02752 Translocation and assembly module subunit TamA
Pseudomonas putida KT2440 0.64 PP_0339 Pyruvate dehydrogenase E1 component 0.13 PP_2892 conserved exported protein of unknown function low > 96
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.14 PFLU_RS18920 outer membrane protein assembly factor low > 109
Pseudomonas fluorescens SBW25 0.64 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.14 PFLU_RS18920 outer membrane protein assembly factor low > 109
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_12865 pyruvate dehydrogenase 0.14 AO353_27865 hypothetical protein
Pseudomonas simiae WCS417 0.64 PS417_02220 pyruvate dehydrogenase 0.14 PS417_16970 membrane protein
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.13 Psyr_2478 surface antigen (D15):Surface antigen variable number
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.13 Psyr_2478 surface antigen (D15):Surface antigen variable number
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS12410 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 ABZR86_RS19705 autotransporter assembly complex family protein low > 74
Castellaniella sp019104865 MT123 0.62 ABCV34_RS04160 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.17 ABCV34_RS08915 BamA/TamA family outer membrane protein
Acidovorax sp. GW101-3H11 0.62 Ac3H11_4093 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.22 Ac3H11_3933 Surface antigen (D15) precursor low > 79
Marinobacter adhaerens HP15 0.62 HP15_3046 pyruvate dehydrogenase subunit E1 0.13 HP15_2341 surface antigen (D15)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF4890 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.19 GFF671 Surface antigen (D15) precursor low > 90
Pseudomonas stutzeri RCH2 0.62 Psest_0448 pyruvate dehydrogenase E1 component, homodimeric type 0.13 Psest_2132 Outer membrane protein
Variovorax sp. SCN45 0.62 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.22 GFF2183 Outer membrane component of TAM transport system 0.73 9
Lysobacter sp. OAE881 0.61 ABIE51_RS18795 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.12 ABIE51_RS01235 autotransporter assembly complex family protein
Shewanella loihica PV-4 0.61 Shew_3431 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.10 Shew_2172 surface antigen (D15) (RefSeq)
Shewanella sp. ANA-3 0.60 Shewana3_0426 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.06 Shewana3_1894 surface antigen (D15) (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.754.1 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.11 Xcc-8004.5193.1 Outer membrane protein assembly factor YaeT precursor
Shewanella oneidensis MR-1 0.60 SO0424 aceE pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file) 0.10 SO2114 conserved hypothetical protein (NCBI ptt file) low > 76
Escherichia coli ECOR27 0.58 NOLOHH_02845 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 NOLOHH_04260 tamA autotransporter assembly complex protein TamA low > 75
Escherichia coli ECRC101 0.58 MCAODC_01015 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 MCAODC_02515 tamA autotransporter assembly complex protein TamA
Escherichia coli ECRC102 0.58 NIAGMN_08350 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 NIAGMN_09850 tamA autotransporter assembly complex protein TamA
Escherichia coli Nissle 1917 0.58 ECOLIN_RS00640 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 ECOLIN_RS24510 autotransporter assembly complex protein TamA low > 55
Escherichia coli ECRC100 0.58 OKFHMN_10500 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 OKFHMN_12000 tamA autotransporter assembly complex protein TamA
Escherichia coli ECRC62 0.58 BNILDI_08765 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 BNILDI_07255 tamA autotransporter assembly complex protein TamA low > 75
Escherichia coli ECRC98 0.58 JDDGAC_14095 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 JDDGAC_15640 tamA autotransporter assembly complex protein TamA
Escherichia coli BL21 0.58 ECD_00113 pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 0.11 ECD_04091 translocation and assembly module for autotransporter export, outer membrane subunit
Escherichia coli BW25113 0.58 b0114 aceE pyruvate dehydrogenase subunit E1 (NCBI) 0.11 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) low > 76
Escherichia coli ECRC99 0.58 KEDOAH_17655 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 KEDOAH_16155 tamA autotransporter assembly complex protein TamA
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_03547 Pyruvate dehydrogenase E1 component 0.11 OHPLBJKB_03813 Translocation and assembly module subunit TamA
Escherichia coli ECOR38 0.58 HEPCGN_08480 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 HEPCGN_10200 tamA autotransporter assembly complex protein TamA 0.72 86
Escherichia fergusonii Becca 0.58 EFB2_03931 Pyruvate dehydrogenase E1 component 0.11 EFB2_04309 Translocation and assembly module subunit TamA low > 86
Pectobacterium carotovorum WPP14 0.58 HER17_RS03290 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 HER17_RS03980 autotransporter assembly complex protein TamA
Klebsiella michiganensis M5al 0.58 BWI76_RS04880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.12 BWI76_RS02775 outer membrane protein assembly factor
Dickeya dadantii 3937 0.58 DDA3937_RS17925 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.12 DDA3937_RS17160 outer membrane protein assembly factor
Rhodanobacter denitrificans MT42 0.58 LRK55_RS10880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.13 LRK55_RS12405 autotransporter assembly complex family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS11175 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.13 LRK54_RS12665 autotransporter assembly complex protein TamA low > 59
Dickeya dianthicola ME23 0.58 DZA65_RS19000 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.12 DZA65_RS18295 outer membrane protein assembly factor
Dickeya dianthicola 67-19 0.58 HGI48_RS17850 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.12 HGI48_RS17215 outer membrane protein assembly factor
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF122 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.11 GFF874 Uncharacterized protein YtfM precursor low > 78
Enterobacter sp. TBS_079 0.58 MPMX20_00807 Pyruvate dehydrogenase E1 component 0.12 MPMX20_00503 Translocation and assembly module subunit TamA low > 85
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3710 pyruvate dehydrogenase E1 component, homodimeric type 0.12 EX28DRAFT_3406 Outer membrane protein low > 76
Shewanella amazonensis SB2B 0.57 Sama_0375 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.06 Sama_1616 hypothetical protein (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.57 LU632_RS03080 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 LU632_RS02105 autotransporter assembly complex protein TamA
Rahnella sp. WP5 0.57 EX31_RS03480 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 EX31_RS08695 outer membrane protein assembly factor low > 89
Serratia liquefaciens MT49 0.57 IAI46_21325 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.11 IAI46_01770 outer membrane protein assembly factor low > 86
Phaeobacter inhibens DSM 17395 0.09 PGA1_c16590 transketolase-like protein 0.06 PGA1_c05440 surface antigen-like protein low > 62
Caulobacter crescentus NA1000 Δfur 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.10 CCNA_01675 outer membrane protein low > 67
Caulobacter crescentus NA1000 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.10 CCNA_01675 outer membrane protein

Not shown: 12 genomes with orthologs for BPHYT_RS12840 only; 3 genomes with orthologs for BPHYT_RS04945 only