| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu0346 | | uridylyltransferase/uridylyl-removing enzyme UTase | 1.0 | Atu1445 | | two component sensor kinase | 0.57 | 2 |
| Rhizobium sp. OAE497 | 0.75 | ABIE40_RS01765 | | [protein-PII] uridylyltransferase | 0.87 | ABIE40_RS09085 | | nitrogen regulation protein NR(II) | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.72 | SMc01124 | | PII uridylyl-transferase | 0.83 | SMc01042 | | nitrogen regulation protein | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_003060 | | [protein-PII] uridylyltransferase | 0.64 | TX73_013415 | | nitrogen regulation protein NR(II) | low | > 86 |
| Bosea sp. OAE506 | 0.50 | ABIE41_RS00205 | | [protein-PII] uridylyltransferase | 0.60 | ABIE41_RS16790 | | ATP-binding protein | low | > 77 |
| Azospirillum brasilense Sp245 | 0.42 | AZOBR_RS02110 | | protein-PII uridylyltransferase | 0.49 | AZOBR_RS14425 | | ATPase | 0.87 | 1 |
| Azospirillum sp. SherDot2 | 0.42 | MPMX19_00912 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.51 | MPMX19_01111 | | Sensory histidine kinase/phosphatase NtrB | low | > 112 |
| Rhodospirillum rubrum S1H | 0.41 | Rru_A3539 | | GlnB (protein PII) uridylyltransferase, GlnD (NCBI) | 0.44 | Rru_A1677 | | Signal transduction histidine kinase, nitrogen specific, NtrB (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.40 | AMB_RS22650 | | [protein-PII] uridylyltransferase | 0.50 | AMB_RS11945 | | PAS domain-containing sensor histidine kinase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.37 | CCNA_00013 | | protein-PII uridylyltransferase | 0.38 | CCNA_01814 | | nitrogen regulation protein ntrB | — | — |
| Caulobacter crescentus NA1000 | 0.37 | CCNA_00013 | | protein-PII uridylyltransferase | 0.38 | CCNA_01814 | | nitrogen regulation protein ntrB | 0.91 | 2 |
| Dinoroseobacter shibae DFL-12 | 0.37 | Dshi_2833 | | UTP-GlnB uridylyltransferase, GlnD (RefSeq) | 0.33 | Dshi_1575 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.36 | PGA1_c26750 | | uridylyltransferase GlnD | 0.25 | PGA1_c14780 | | nitrogen regulation protein NtrB | — | — |
| Pseudomonas sp. S08-1 | 0.25 | OH686_06495 | | protein-P-II uridylyltransferase | 0.22 | OH686_10635 | | Nitrogen regulation protein NtrB | low | > 80 |
| Pseudomonas putida KT2440 | 0.24 | PP_1589 | | uridylyltransferase | 0.23 | PP_5047 | | two-component system sensory histidine kinase/phosphatase GlnL/GlnG | 0.80 | 1 |
| Pseudomonas stutzeri RCH2 | 0.24 | Psest_2845 | | [Protein-PII] uridylyltransferase | 0.22 | Psest_3931 | | Signal transduction histidine kinase, nitrogen specific | 0.89 | 1 |
| Pseudomonas fluorescens FW300-N1B4 | 0.24 | Pf1N1B4_3081 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.23 | Pf1N1B4_1610 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.67 | 50 |
| Pseudomonas simiae WCS417 | 0.24 | PS417_06200 | | protein-PII uridylyltransferase | 0.22 | PS417_01640 | | histidine kinase | 0.79 | 2 |
| Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | 0.22 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | 0.22 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | 0.85 | 1 |
| Pseudomonas fluorescens FW300-N2E3 | 0.23 | AO353_16450 | | protein-PII uridylyltransferase | 0.23 | AO353_12150 | | histidine kinase | 0.87 | 1 |
| Pseudomonas fluorescens FW300-N2C3 | 0.23 | AO356_06050 | | protein-PII uridylyltransferase | 0.23 | AO356_09725 | | histidine kinase | 0.90 | 1 |
| Pseudomonas fluorescens FW300-N2E2 | 0.23 | Pf6N2E2_3072 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.23 | Pf6N2E2_3825 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.84 | 2 |
| Pseudomonas fluorescens GW456-L13 | 0.23 | PfGW456L13_4711 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.23 | PfGW456L13_346 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.86 | 2 |
| Pseudomonas sp. RS175 | 0.22 | PFR28_00394 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.23 | PFR28_04945 | | Sensory histidine kinase/phosphatase NtrB | 0.33 | 49 |
| Pseudomonas syringae pv. syringae B728a | 0.22 | Psyr_1341 | | Protein-P-II uridylyltransferase | 0.23 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | 0.73 | 1 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.22 | Psyr_1341 | | Protein-P-II uridylyltransferase | 0.23 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | 0.64 | 15 |
| Dickeya dadantii 3937 | 0.22 | DDA3937_RS05105 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.19 | DDA3937_RS00130 | | nitrogen regulation protein NR(II) | 0.57 | 63 |
| Dickeya dianthicola 67-19 | 0.22 | HGI48_RS05105 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.19 | HGI48_RS21230 | | nitrogen regulation protein NR(II) | low | > 71 |
| Dickeya dianthicola ME23 | 0.22 | DZA65_RS05445 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.19 | DZA65_RS22205 | | nitrogen regulation protein NR(II) | low | > 75 |
| Burkholderia phytofirmans PsJN | 0.21 | BPHYT_RS12150 | | PII uridylyl-transferase | 0.21 | BPHYT_RS12940 | | signal transduction histidine kinase | 0.67 | 66 |
| Serratia liquefaciens MT49 | 0.21 | IAI46_20270 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.20 | IAI46_24955 | | nitrogen regulation protein NR(II) | low | > 86 |
| Escherichia coli ECOR27 | 0.21 | NOLOHH_02580 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.21 | NOLOHH_06235 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECRC62 | 0.21 | BNILDI_09090 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.21 | BNILDI_05295 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.21 | OHPLBJKB_03497 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.21 | OHPLBJKB_04183 | | Sensory histidine kinase/phosphatase NtrB | low | > 73 |
| Escherichia coli BL21 | 0.21 | ECD_00165 | | uridylyltransferase | 0.21 | ECD_03754 | | sensory histidine kinase in two-component regulatory system with GlnG | low | > 60 |
| Escherichia coli ECOR38 | 0.21 | HEPCGN_08185 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.21 | HEPCGN_12735 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli Nissle 1917 | 0.21 | ECOLIN_RS00915 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.21 | ECOLIN_RS22300 | | nitrogen regulation protein NR(II) | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.21 | H281DRAFT_00608 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | 0.21 | H281DRAFT_00453 | | two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL | 0.48 | 12 |
| Escherichia coli ECRC102 | 0.21 | NIAGMN_08085 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.21 | NIAGMN_11860 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECRC101 | 0.21 | OKFHMN_10235 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.21 | OKFHMN_14105 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia fergusonii Becca | 0.21 | EFB2_03878 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.21 | EFB2_04747 | | Sensory histidine kinase/phosphatase NtrB | — | — |
| Escherichia coli BW25113 | 0.21 | b0167 | glnD | PII uridylyl-transferase (NCBI) | 0.21 | b3869 | glnL | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | 0.31 | 5 |
| Escherichia coli ECRC101 | 0.21 | MCAODC_00750 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.21 | MCAODC_04605 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECRC98 | 0.21 | JDDGAC_13830 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.21 | JDDGAC_17730 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECRC99 | 0.21 | KEDOAH_17920 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.21 | KEDOAH_14045 | glnL | nitrogen regulation protein NR(II) | — | — |
| Klebsiella michiganensis M5al | 0.21 | BWI76_RS05200 | | bifunctional uridylyltransferase/uridylyl-removing protein | 0.20 | BWI76_RS00390 | | two-component system sensor histidine kinase NtrB | 0.59 | 3 |
| Pectobacterium carotovorum WPP14 | 0.21 | HER17_RS16345 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.19 | HER17_RS21435 | | nitrogen regulation protein NR(II) | low | > 75 |
| Marinobacter adhaerens HP15 | 0.21 | HP15_1163 | | [protein-PII] uridylyltransferase | 0.24 | HP15_426 | | signal transduction histidine kinase, nitrogen specific, NtrB | low | > 73 |
| Herbaspirillum seropedicae SmR1 | 0.21 | HSERO_RS10865 | | PII uridylyl-transferase | 0.25 | HSERO_RS15685 | | histidine kinase | 0.88 | 1 |
| Ralstonia sp. UNC404CL21Col | 0.21 | ABZR87_RS11815 | | [protein-PII] uridylyltransferase | 0.22 | ABZR87_RS11065 | | nitrogen regulation protein NR(II) | 0.85 | 1 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.21 | GFF55 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.20 | GFF2221 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.94 | 2 |
| Enterobacter asburiae PDN3 | 0.21 | EX28DRAFT_3754 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | 0.21 | EX28DRAFT_4351 | | Signal transduction histidine kinase, nitrogen specific | low | > 76 |
| Paraburkholderia sabiae LMG 24235 | 0.21 | QEN71_RS06410 | | [protein-PII] uridylyltransferase | 0.20 | QEN71_RS05670 | | nitrogen regulation protein NR(II) | low | > 153 |
| Pantoea sp. MT58 | 0.21 | IAI47_15540 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.20 | IAI47_00455 | | nitrogen regulation protein NR(II) | 0.71 | 2 |
| Enterobacter sp. TBS_079 | 0.21 | MPMX20_00851 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.21 | MPMX20_04596 | | Sensory histidine kinase/phosphatase NtrB | — | — |
| Rahnella sp. WP5 | 0.21 | EX31_RS13045 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.20 | EX31_RS15875 | | nitrogen regulation protein NR(II) | 0.52 | 4 |
| Ralstonia solanacearum PSI07 | 0.21 | RPSI07_RS17110 | | [protein-PII] uridylyltransferase | 0.24 | RPSI07_RS17820 | | PAS domain-containing sensor histidine kinase | low | > 81 |
| Ralstonia solanacearum UW163 | 0.20 | UW163_RS13695 | | [protein-PII] uridylyltransferase | 0.24 | UW163_RS12995 | | PAS domain-containing sensor histidine kinase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.20 | RALBFv3_RS00365 | | [protein-PII] uridylyltransferase | 0.24 | RALBFv3_RS15535 | | PAS domain-containing sensor histidine kinase | — | — |
| Kangiella aquimarina DSM 16071 | 0.20 | B158DRAFT_1072 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | 0.21 | B158DRAFT_0715 | | Signal transduction histidine kinase, nitrogen specific | 0.91 | 1 |
| Erwinia tracheiphila SCR3 | 0.20 | LU632_RS19980 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.21 | LU632_RS22140 | glnL | nitrogen regulation protein NR(II) | 0.71 | 10 |
| Acinetobacter radioresistens SK82 | 0.20 | MPMX26_01867 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.19 | MPMX26_01293 | | Sensory histidine kinase/phosphatase NtrB | 0.78 | 1 |
| Ralstonia solanacearum GMI1000 | 0.20 | RS_RS07035 | | bifunctional uridylyltransferase/uridylyl-removing protein | 0.23 | RS_RS06315 | | PAS domain-containing sensor histidine kinase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.20 | RR42_RS11885 | | (protein-PII) uridylyltransferase | 0.23 | RR42_RS12985 | | histidine kinase | 0.94 | 1 |
| Vibrio cholerae E7946 ATCC 55056 | 0.20 | CSW01_11520 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | 0.23 | CSW01_13860 | | nitrogen regulation protein NR(II) | low | > 62 |
| Shewanella loihica PV-4 | 0.20 | Shew_2637 | | PII uridylyl-transferase (RefSeq) | 0.22 | Shew_3560 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | 0.79 | 3 |
| Acidovorax sp. GW101-3H11 | 0.19 | Ac3H11_537 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.23 | Ac3H11_4431 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.87 | 2 |
| Alteromonas macleodii MIT1002 | 0.19 | MIT1002_01001 | | PII uridylyl-transferase | 0.20 | MIT1002_03185 | | Nitrogen regulation protein NR(II) | 0.80 | 24 |
| Shewanella amazonensis SB2B | 0.19 | Sama_1137 | | PII uridylyl-transferase (RefSeq) | 0.22 | Sama_3426 | | nitrogen regulation protein (RefSeq) | 0.83 | 2 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.19 | GFF4563 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.22 | GFF5270 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 90 |
| Shewanella sp. ANA-3 | 0.18 | Shewana3_2817 | | PII uridylyl-transferase (RefSeq) | 0.20 | Shewana3_0259 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | 0.96 | 2 |
| Shewanella oneidensis MR-1 | 0.18 | SO1626 | glnD | protein-P-II uridylyltransferase (NCBI ptt file) | 0.20 | SO4471 | ntrB | nitrogen regulation protein (NCBI ptt file) | 0.93 | 1 |
Not shown: 14 genomes with orthologs for Atu0346 only; 0 genomes with orthologs for Atu1445 only