Conservation of cofitness between Atu0876 and Atu0039 in Agrobacterium fabrum C58

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0876 superoxide dismutase 1.0 Atu0039 imidazoleglycerol-phosphate synthase cyclase 0.42 6
Rhizobium sp. OAE497 0.92 ABIE40_RS22300 superoxide dismutase 0.82 ABIE40_RS19440 imidazole glycerol phosphate synthase subunit HisF low > 107
Sinorhizobium meliloti 1021 0.88 SMc00043 superoxide dismutase Fe protein 0.85 SMc02569 imidazole glycerol phosphate synthase subunit HisF
Rhodopseudomonas palustris CGA009 0.76 TX73_008710 superoxide dismutase 0.69 TX73_001625 imidazole glycerol phosphate synthase subunit HisF
Bosea sp. OAE506 0.69 ABIE41_RS22480 superoxide dismutase 0.73 ABIE41_RS03810 imidazole glycerol phosphate synthase subunit HisF
Azospirillum brasilense Sp245 0.57 AZOBR_RS15415 superoxide dismutase 0.74 AZOBR_RS01685 imidazole glycerol phosphate synthase
Azospirillum sp. SherDot2 0.56 MPMX19_01161 Superoxide dismutase [Fe] 0.73 MPMX19_02542 Imidazole glycerol phosphate synthase subunit HisF
Synechococcus elongatus PCC 7942 0.52 Synpcc7942_0801 sodB Superoxide dismutase 0.57 Synpcc7942_2087 hisF imidazole glycerol phosphate synthase subunit HisF
Acinetobacter radioresistens SK82 0.51 MPMX26_00996 Superoxide dismutase [Fe] 0.64 MPMX26_02854 Imidazole glycerol phosphate synthase subunit HisF low > 36
Magnetospirillum magneticum AMB-1 0.49 AMB_RS12630 superoxide dismutase 0.72 AMB_RS22925 imidazole glycerol phosphate synthase cyclase subunit
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_2851 Superoxide dismutase [Fe] (EC 1.15.1.1) 0.67 Pf6N2E2_3838 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_1779 Superoxide dismutase [Fe] (EC 1.15.1.1) 0.67 PfGW456L13_358 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_05005 superoxide dismutase 0.67 AO356_09795 imidazole glycerol phosphate synthase subunit HisF
Pseudomonas sp. RS175 0.49 PFR28_00606 Superoxide dismutase [Fe] 0.67 PFR28_04933 Imidazole glycerol phosphate synthase subunit HisF
Pseudomonas simiae WCS417 0.49 PS417_22180 superoxide dismutase 0.67 PS417_01580 imidazole glycerol phosphate synthase
Rhodospirillum rubrum S1H 0.49 Rru_A1760 Superoxide dismutase (NCBI) 0.70 Rru_A3594 Histidine biosynthesis protein HisF (NCBI)
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_03930 superoxide dismutase 0.67 AO353_12090 imidazole glycerol phosphate synthase subunit HisF
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS23805 superoxide dismutase 0.67 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF
Pseudomonas fluorescens SBW25 0.48 PFLU_RS23805 superoxide dismutase 0.67 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF
Pseudomonas putida KT2440 0.48 PP_0915 superoxide dismutase (Fe) 0.67 PP_0293 Imidazole glycerol phosphate synthase subunit HisF
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS03480 superoxide dismutase 0.66 RR42_RS18885 imidazole glycerol phosphate synthase
Ralstonia solanacearum PSI07 0.48 RPSI07_RS12240 superoxide dismutase 0.65 RPSI07_RS10420 imidazole glycerol phosphate synthase subunit HisF
Ralstonia solanacearum UW163 0.48 UW163_RS08570 superoxide dismutase 0.66 UW163_RS06800 imidazole glycerol phosphate synthase subunit HisF
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS05055 superoxide dismutase 0.66 RALBFv3_RS06815 imidazole glycerol phosphate synthase subunit HisF
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_711 Superoxide dismutase [Fe] (EC 1.15.1.1) 0.67 Pf1N1B4_1623 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_4059 Superoxide dismutase 0.67 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF
Pseudomonas stutzeri RCH2 0.47 Psest_1164 Superoxide dismutase 0.67 Psest_0156 imidazoleglycerol phosphate synthase, cyclase subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_4059 Superoxide dismutase 0.67 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS00705 superoxide dismutase [Fe] 0.65 ABZR87_RS02470 imidazole glycerol phosphate synthase subunit HisF
Pontibacter actiniarum KMM 6156, DSM 19842 0.47 CA264_14325 superoxide dismutase 0.48 CA264_05110 imidazole glycerol phosphate synthase cyclase subunit
Pseudomonas sp. S08-1 0.47 OH686_07215 Superoxide dismutase [Fe] 0.67 OH686_14595 Imidazole glycerol phosphate synthase cyclase subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF4512 Superoxide dismutase [Fe] (EC 1.15.1.1) 0.60 GFF1309 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS00445 superoxide dismutase 0.35 A4249_RS10715 imidazole glycerol phosphate synthase subunit HisF
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3619 Superoxide dismutase [Fe] (EC 1.15.1.1) 0.39 GFF3907 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) low > 78
Escherichia coli ECRC101 0.45 MCAODC_18005 sodB superoxide dismutase [Fe] 0.40 MCAODC_20450 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli BW25113 0.45 b1656 sodB superoxide dismutase, Fe (NCBI) 0.40 b2025 hisF imidazole glycerol phosphate synthase subunit HisF (NCBI) 0.19 60
Escherichia coli Nissle 1917 0.45 ECOLIN_RS09230 superoxide dismutase [Fe] 0.40 ECOLIN_RS11970 imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC99 0.45 KEDOAH_00705 sodB superoxide dismutase [Fe] 0.40 KEDOAH_03660 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECOR27 0.45 NOLOHH_17925 sodB superoxide dismutase [Fe] 0.40 NOLOHH_15805 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC102 0.45 NIAGMN_00660 sodB superoxide dismutase [Fe] 0.40 NIAGMN_22435 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02069 Superoxide dismutase [Fe] 0.39 OHPLBJKB_01675 Imidazole glycerol phosphate synthase subunit HisF low > 73
Escherichia coli ECRC98 0.45 JDDGAC_01995 sodB superoxide dismutase [Fe] 0.40 JDDGAC_28600 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia fergusonii Becca 0.45 EFB2_02337 Superoxide dismutase [Fe] 0.40 EFB2_01831 Imidazole glycerol phosphate synthase subunit HisF low > 86
Escherichia coli ECOR38 0.45 HEPCGN_05790 sodB superoxide dismutase [Fe] 0.39 HEPCGN_03195 hisF Imidazole glycerol phosphate synthase subunit HisF low > 85
Escherichia coli ECRC62 0.45 BNILDI_16715 sodB superoxide dismutase [Fe] 0.40 BNILDI_14715 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC101 0.45 OKFHMN_27405 sodB superoxide dismutase [Fe] 0.40 OKFHMN_24490 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli BL21 0.45 ECD_01626 superoxide dismutase, Fe 0.39 ECD_01927 imidazole glycerol phosphate synthase, catalytic subunit with HisH
Variovorax sp. OAS795 0.45 ABID97_RS16940 Fe-Mn family superoxide dismutase 0.64 ABID97_RS23105 imidazole glycerol phosphate synthase subunit HisF
Enterobacter asburiae PDN3 0.45 EX28DRAFT_1653 Superoxide dismutase 0.38 EX28DRAFT_0534 imidazoleglycerol phosphate synthase, cyclase subunit low > 76
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04108 superoxide dismutase, Fe-Mn family 0.68 H281DRAFT_05659 imidazole glycerol phosphate synthase subunit hisF
Lysobacter sp. OAE881 0.45 ABIE51_RS15385 Fe-Mn family superoxide dismutase 0.38 ABIE51_RS13300 imidazole glycerol phosphate synthase subunit HisF
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_1593 Superoxide dismutase 0.48 Echvi_2516 imidazoleglycerol phosphate synthase, cyclase subunit low > 79
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS05845 superoxide dismutase 0.64 HSERO_RS20315 imidazole glycerol phosphate synthase
Paraburkholderia graminis OAS925 0.44 ABIE53_003343 Fe-Mn family superoxide dismutase 0.68 ABIE53_003695 cyclase
Variovorax sp. SCN45 0.44 GFF3506 Superoxide dismutase [Fe] (EC 1.15.1.1) 0.64 GFF5357 Imidazole glycerol phosphate synthase cyclase subunit
Ralstonia solanacearum GMI1000 0.44 RS_RS12665 superoxide dismutase 0.65 RS_RS14760 imidazole glycerol phosphate synthase subunit HisF
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS02840 Fe-Mn family superoxide dismutase 0.67 QEN71_RS27835 imidazole glycerol phosphate synthase subunit HisF
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.2280.1 Manganese superoxide dismutase (EC 1.15.1.1) 0.37 Xcc-8004.2943.1 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS15860 superoxide dismutase 0.68 BPHYT_RS17680 imidazole glycerol phosphate synthase subunit HisF
Marinobacter adhaerens HP15 0.43 HP15_2351 superoxide dismutase, Fe 0.69 HP15_3009 protein containing histidine biosynthesis, HisF domain
Shewanella loihica PV-4 0.43 Shew_1834 superoxide dismutase (RefSeq) 0.36 Shew_2203 imidazole glycerol phosphate synthase subunit HisF (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_10230 superoxide dismutase [Fe] 0.37 CSW01_05775 imidazole glycerol phosphate synthase cyclase subunit
Pectobacterium carotovorum WPP14 0.42 HER17_RS21110 superoxide dismutase [Mn] 0.38 HER17_RS12255 imidazole glycerol phosphate synthase subunit HisF
Rahnella sp. WP5 0.42 EX31_RS05785 superoxide dismutase [Mn] 0.40 EX31_RS11465 imidazole glycerol phosphate synthase subunit HisF 0.87 19
Shewanella amazonensis SB2B 0.42 Sama_1920 superoxide dismutase (RefSeq) 0.34 Sama_1947 imidazole glycerol phosphate synthase subunit HisF (RefSeq)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS20755 superoxide dismutase 0.44 ABZR88_RS06855 imidazole glycerol phosphate synthase subunit HisF
Shewanella oneidensis MR-1 0.42 SO2881 SodB superoxide dismutase, Fe (NCBI ptt file) 0.37 SO2068 hisF hisF protein (cyclase) (NCBI ptt file)
Shewanella sp. ANA-3 0.42 Shewana3_1639 manganese and iron superoxide dismutase (RefSeq) 0.36 Shewana3_1848 imidazole glycerol phosphate synthase subunit HisF (RefSeq)
Erwinia tracheiphila SCR3 0.41 LU632_RS00125 sodA superoxide dismutase [Mn] 0.37 LU632_RS08920 hisF imidazole glycerol phosphate synthase subunit HisF
Alteromonas macleodii MIT1002 0.41 MIT1002_01234 Superoxide dismutase [Fe] 0.37 MIT1002_02638 Imidazole glycerol phosphate synthase subunit HisF
Dickeya dadantii 3937 0.41 DDA3937_RS20960 superoxide dismutase [Mn] 0.40 DDA3937_RS09710 imidazole glycerol phosphate synthase subunit HisF
Pantoea sp. MT58 0.40 IAI47_18725 superoxide dismutase [Mn] 0.37 IAI47_07065 imidazole glycerol phosphate synthase subunit HisF
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_4151 Superoxide dismutase 0.69 Ga0059261_1048 imidazoleglycerol phosphate synthase, cyclase subunit
Dickeya dianthicola 67-19 0.40 HGI48_RS00285 superoxide dismutase [Mn] 0.40 HGI48_RS09720 imidazole glycerol phosphate synthase subunit HisF
Dickeya dianthicola ME23 0.39 DZA65_RS00285 superoxide dismutase [Mn] 0.40 DZA65_RS10030 imidazole glycerol phosphate synthase subunit HisF
Mycobacterium tuberculosis H37Rv 0.30 Rv3846 Superoxide dismutase [FE] SodA 0.51 Rv1605 Probable cyclase HisF

Not shown: 1 genomes with orthologs for Atu0876 only; 26 genomes with orthologs for Atu0039 only