Conservation of cofitness between AO353_00310 and AO353_20625 in Pseudomonas fluorescens FW300-N2E3

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_00310 transaldolase 1.0 AO353_20625 3-isopropylmalate dehydratase 0.67 13
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) 0.98 Pf1N1B4_14 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) — —
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) 0.99 PfGW456L13_3947 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.53 28
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS07805 transaldolase 0.95 PFLU_RS20575 3-isopropylmalate dehydratase small subunit low > 109
Pseudomonas simiae WCS417 0.91 PS417_07730 transaldolase 0.94 PS417_18595 3-isopropylmalate dehydratase — —
Pseudomonas fluorescens SBW25 0.91 PFLU_RS07805 transaldolase 0.95 PFLU_RS20575 3-isopropylmalate dehydratase small subunit low > 109
Pseudomonas sp. RS175 0.91 PFR28_01142 Transaldolase 0.98 PFR28_02823 3-isopropylmalate dehydratase small subunit 1 low > 88
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_2258 Transaldolase (EC 2.2.1.2) 0.98 Pf6N2E2_64 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.47 35
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_02175 transaldolase 0.98 AO356_21405 3-isopropylmalate dehydratase 0.70 26
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_1914 transaldolase 0.92 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.76 2
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_1914 transaldolase 0.92 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.73 19
Pseudomonas putida KT2440 0.78 PP_2168 Transaldolase 0.94 PP_1986 3-isopropylmalate dehydratase small subunit 0.64 31
Pseudomonas stutzeri RCH2 0.78 Psest_2708 transaldolase 0.86 Psest_2590 3-isopropylmalate dehydratase, small subunit low > 67
Pseudomonas sp. S08-1 0.77 OH686_22740 transaldolase 0.88 OH686_04475 3-isopropylmalate dehydratase small subunit low > 80
Alteromonas macleodii MIT1002 0.63 MIT1002_03080 Transaldolase B 0.49 MIT1002_00946 3-isopropylmalate dehydratase small subunit 1 — —
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS12545 transaldolase 0.40 ABZR86_RS15955 3-isopropylmalate dehydratase small subunit 0.50 35
Lysobacter sp. OAE881 0.63 ABIE51_RS02125 transaldolase 0.40 ABIE51_RS17580 3-isopropylmalate dehydratase small subunit low > 62
Shewanella amazonensis SB2B 0.63 Sama_0913 transaldolase B (RefSeq) 0.49 Sama_0338 leuD isopropylmalate isomerase small subunit (RefSeq) — —
Shewanella oneidensis MR-1 0.62 SO3546 tal transaldolase (NCBI ptt file) 0.50 SO4233 leuD 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) — —
Shewanella sp. ANA-3 0.61 Shewana3_3147 transaldolase B (RefSeq) 0.50 Shewana3_3758 leuD isopropylmalate isomerase small subunit (RefSeq) — —
Rhizobium sp. OAE497 0.61 ABIE40_RS16940 transaldolase 0.51 ABIE40_RS19040 3-isopropylmalate dehydratase small subunit — —
Agrobacterium fabrum C58 0.60 Atu4464 transaldolase B 0.52 Atu2790 3-isopropylmalate dehydratase, small subunit — —
Shewanella loihica PV-4 0.60 Shew_1089 transaldolase B (RefSeq) 0.55 Shew_3469 isopropylmalate isomerase small subunit (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_17325 transaldolase 0.56 CSW01_12610 3-isopropylmalate dehydratase small subunit low > 62
Klebsiella michiganensis M5al 0.60 BWI76_RS04270 transaldolase 0.58 BWI76_RS04665 3-isopropylmalate dehydratase small subunit 0.25 79
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS05500 transaldolase 0.72 HSERO_RS16505 3-isopropylmalate dehydratase small subunit low > 78
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF1083 Transaldolase (EC 2.2.1.2) 0.61 GFF167 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03652 Transaldolase 0.61 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit low > 73
Escherichia coli ECOR27 0.59 NOLOHH_03410 transaldolase B 0.60 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit low > 75
Pantoea sp. MT58 0.59 IAI47_16195 transaldolase 0.56 IAI47_16015 3-isopropylmalate dehydratase small subunit low > 76
Escherichia coli BL21 0.59 ECD_00008 transaldolase B 0.60 ECD_00073 3-isopropylmalate dehydratase small subunit low > 61
Escherichia coli BW25113 0.59 b0008 talB transaldolase B (NCBI) 0.60 b0071 leuD isopropylmalate isomerase small subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.59 ECOLIN_RS00045 transaldolase 0.60 ECOLIN_RS00385 3-isopropylmalate dehydratase small subunit low > 55
Escherichia coli ECRC101 0.59 MCAODC_01595 transaldolase B 0.61 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit low > 87
Enterobacter sp. TBS_079 0.59 MPMX20_00716 Transaldolase B 0.60 MPMX20_00766 3-isopropylmalate dehydratase small subunit 1 low > 85
Escherichia coli ECRC102 0.59 NIAGMN_08930 transaldolase B 0.61 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit — —
Escherichia coli ECRC100 0.59 OKFHMN_11080 transaldolase B 0.61 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit low > 80
Escherichia coli ECRC99 0.59 KEDOAH_17075 transaldolase B 0.61 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit — —
Rahnella sp. WP5 0.59 EX31_RS03920 transaldolase 0.59 EX31_RS03695 3-isopropylmalate dehydratase small subunit low > 89
Escherichia coli ECRC98 0.59 JDDGAC_14675 transaldolase B 0.61 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit low > 86
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS11000 transaldolase 0.74 ABZR87_RS14535 3-isopropylmalate dehydratase small subunit low > 80
Escherichia coli ECOR38 0.59 HEPCGN_09085 transaldolase B 0.60 HEPCGN_08710 leuD 3-isopropylmalate dehydratase small subunit low > 87
Escherichia coli ECRC62 0.59 BNILDI_08195 transaldolase B 0.60 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit low > 75
Escherichia fergusonii Becca 0.59 EFB2_04035 Transaldolase B 0.60 EFB2_03974 3-isopropylmalate dehydratase small subunit low > 86
Serratia liquefaciens MT49 0.59 IAI46_03055 transaldolase 0.57 IAI46_03340 3-isopropylmalate dehydratase small subunit low > 86
Enterobacter asburiae PDN3 0.58 EX28DRAFT_3620 transaldolase 0.59 EX28DRAFT_3667 3-isopropylmalate dehydratase, small subunit low > 76
Marinobacter adhaerens HP15 0.58 HP15_2241 transaldolase 0.72 HP15_1833 isopropylmalate isomerase small subunit low > 73
Dickeya dianthicola ME23 0.58 DZA65_RS19465 transaldolase 0.56 DZA65_RS19215 3-isopropylmalate dehydratase small subunit low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF1363 Transaldolase (EC 2.2.1.2) 0.71 GFF3361 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 90
Dickeya dianthicola 67-19 0.58 HGI48_RS18325 transaldolase 0.57 HGI48_RS18070 3-isopropylmalate dehydratase small subunit low > 71
Acidovorax sp. GW101-3H11 0.58 Ac3H11_2059 Transaldolase (EC 2.2.1.2) 0.68 Ac3H11_1527 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.64 27
Pectobacterium carotovorum WPP14 0.58 HER17_RS02815 transaldolase 0.56 HER17_RS03070 3-isopropylmalate dehydratase small subunit low > 75
Dickeya dadantii 3937 0.57 DDA3937_RS18395 transaldolase 0.57 DDA3937_RS18130 3-isopropylmalate dehydratase small subunit low > 74
Ralstonia solanacearum GMI1000 0.57 RS_RS06170 transaldolase 0.74 RS_RS09995 3-isopropylmalate dehydratase small subunit — —
Erwinia tracheiphila SCR3 0.57 LU632_RS02630 tal transaldolase 0.52 LU632_RS02865 leuD 3-isopropylmalate dehydratase small subunit low > 74
Ralstonia solanacearum PSI07 0.57 RPSI07_RS18015 transaldolase 0.73 RPSI07_RS14700 3-isopropylmalate dehydratase small subunit — —
Ralstonia solanacearum UW163 0.57 UW163_RS12825 transaldolase 0.73 UW163_RS11110 3-isopropylmalate dehydratase small subunit — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS15360 transaldolase 0.73 RALBFv3_RS02615 3-isopropylmalate dehydratase small subunit low > 76
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS13050 transaldolase 0.69 RR42_RS14390 3-isopropylmalate dehydratase low > 128
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS24595 transaldolase 0.70 QEN71_RS17615 3-isopropylmalate dehydratase small subunit 0.40 116
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS06045 transaldolase 0.70 BPHYT_RS33905 3-isopropylmalate dehydratase small subunit 0.55 80
Paraburkholderia graminis OAS925 0.55 ABIE53_001416 transaldolase 0.70 ABIE53_004803 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit low > 113
Bosea sp. OAE506 0.54 ABIE41_RS23900 transaldolase 0.50 ABIE41_RS11640 3-isopropylmalate dehydratase small subunit — —
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_00286 transaldolase 0.71 H281DRAFT_06073 3-isopropylmalate dehydratase, small subunit low > 103
Variovorax sp. SCN45 0.54 GFF5266 Transaldolase (EC 2.2.1.2) 0.71 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 127
Variovorax sp. OAS795 0.53 ABID97_RS07095 transaldolase 0.70 ABID97_RS08460 3-isopropylmalate dehydratase small subunit — —
Castellaniella sp019104865 MT123 0.53 ABCV34_RS15500 transaldolase 0.70 ABCV34_RS04285 3-isopropylmalate dehydratase small subunit low > 48
Rhodospirillum rubrum S1H 0.49 Rru_A1357 Transaldolase AB (NCBI) 0.55 Rru_A1190 3-isopropylmalate dehydratase small subunit region (NCBI) low > 58
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4226.1 Transaldolase (EC 2.2.1.2) 0.81 Xcc-8004.1050.1 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 74
Acinetobacter radioresistens SK82 0.45 MPMX26_01753 Transaldolase 0.72 MPMX26_00346 3-isopropylmalate dehydratase small subunit 1 low > 36
Pedobacter sp. GW460-11-11-14-LB5 0.10 CA265_RS08685 fructose-6-phosphate aldolase 0.42 CA265_RS15840 3-isopropylmalate dehydratase small subunit low > 88

Not shown: 1 genomes with orthologs for AO353_00310 only; 27 genomes with orthologs for AO353_20625 only