Conservation of cofitness between AO353_16875 and AO353_07180 in Pseudomonas fluorescens FW300-N2E3

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_16875 ribosomal protein S12 methylthiotransferase RimO 1.0 AO353_07180 zinc-binding protein 0.33 8
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_4653 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.97 PfGW456L13_1228 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) low > 87
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 1.00 Pf1N1B4_2554 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) low > 87
Pseudomonas sp. RS175 0.97 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO 0.96 PFR28_04038 Purine nucleoside phosphoramidase low > 88
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_05600 ribosomal protein S12 methylthiotransferase RimO 0.97 AO356_14465 zinc-binding protein low > 104
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.94 PFLU_RS27340 histidine triad nucleotide-binding protein 0.27 2
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.97 Pf6N2E2_4831 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) low > 103
Pseudomonas fluorescens SBW25 0.96 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.94 PFLU_RS27340 histidine triad nucleotide-binding protein low > 109
Pseudomonas simiae WCS417 0.96 PS417_05880 ribosomal protein S12 methylthiotransferase 0.86 PS417_25685 zinc-binding protein low > 88
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.97 Psyr_4573 Histidine triad (HIT) protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.97 Psyr_4573 Histidine triad (HIT) protein low > 86
Pseudomonas putida KT2440 0.89 PP_1197 ribosomal protein S12 methylthiotransferase 0.87 PP_0428 aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase low > 96
Pseudomonas sp. S08-1 0.85 OH686_18875 ribosomal protein S12 methylthiotransferase RimO 0.78 OH686_15165 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) low > 80
Pseudomonas stutzeri RCH2 0.83 Psest_2632 ribosomal protein S12 methylthiotransferase RimO 0.78 Psest_3643 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 67
Castellaniella sp019104865 MT123 0.77 ABCV34_RS14230 30S ribosomal protein S12 methylthiotransferase RimO 0.42 ABCV34_RS11265 histidine triad nucleotide-binding protein — —
Marinobacter adhaerens HP15 0.75 HP15_2459 MiaB-like tRNA modifying enzyme YliG 0.64 HP15_3384 HIT (histidine triad) family protein low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.45 GFF3386 YcfF/hinT protein: a purine nucleoside phosphoramidase low > 78
Erwinia tracheiphila SCR3 0.72 LU632_RS09580 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.45 LU632_RS14775 hinT purine nucleoside phosphoramidase low > 74
Escherichia coli ECRC99 0.72 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.45 KEDOAH_24230 hinT purine nucleoside phosphoramidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO 0.45 OHPLBJKB_02563 Purine nucleoside phosphoramidase — —
Escherichia coli ECRC102 0.72 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.45 NIAGMN_24305 hinT purine nucleoside phosphoramidase — —
Escherichia coli ECRC98 0.72 JDDGAC_09695 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.45 JDDGAC_07185 hinT purine nucleoside phosphoramidase — —
Escherichia coli ECOR27 0.72 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.45 NOLOHH_21055 hinT purine nucleoside phosphoramidase low > 75
Escherichia coli BW25113 0.72 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) 0.45 b1103 ycfF orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR38 0.72 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.45 HEPCGN_23960 hinT purine nucleoside phosphoramidase low > 87
Escherichia coli ECRC101 0.72 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.45 MCAODC_22885 hinT purine nucleoside phosphoramidase low > 87
Escherichia coli BL21 0.72 ECD_00802 ribosomal protein S12 methylthiotransferase 0.45 ECD_01099 purine nucleoside phosphoramidase, dadA activator protein — —
Escherichia coli ECRC62 0.72 BNILDI_20690 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.45 BNILDI_19215 hinT purine nucleoside phosphoramidase low > 75
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2131 ribosomal protein S12 methylthiotransferase RimO 0.46 EX28DRAFT_1827 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 76
Escherichia fergusonii Becca 0.72 EFB2_03271 Ribosomal protein S12 methylthiotransferase RimO 0.45 EFB2_02872 Purine nucleoside phosphoramidase low > 86
Klebsiella michiganensis M5al 0.72 BWI76_RS09115 30S ribosomal protein S12 methylthiotransferase RimO 0.48 BWI76_RS11145 histidine triad nucleotide-binding protein — —
Escherichia coli ECRC100 0.72 OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.45 OKFHMN_03525 hinT purine nucleoside phosphoramidase — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS04440 30S ribosomal protein S12 methylthiotransferase RimO 0.44 ECOLIN_RS06370 purine nucleoside phosphoramidase — —
Enterobacter sp. TBS_079 0.71 MPMX20_01473 Ribosomal protein S12 methylthiotransferase RimO 0.45 MPMX20_01784 Purine nucleoside phosphoramidase low > 85
Dickeya dianthicola 67-19 0.71 HGI48_RS09400 30S ribosomal protein S12 methylthiotransferase RimO 0.47 HGI48_RS13135 purine nucleoside phosphoramidase low > 71
Pectobacterium carotovorum WPP14 0.71 HER17_RS12755 30S ribosomal protein S12 methylthiotransferase RimO 0.48 HER17_RS08705 purine nucleoside phosphoramidase low > 75
Azospirillum brasilense Sp245 0.70 AZOBR_RS14980 ribosomal protein S12 methylthiotransferase 0.33 AZOBR_RS01695 hypothetical protein low > 97
Dickeya dianthicola ME23 0.70 DZA65_RS09710 30S ribosomal protein S12 methylthiotransferase RimO 0.47 DZA65_RS13605 purine nucleoside phosphoramidase low > 75
Dickeya dadantii 3937 0.70 DDA3937_RS09385 30S ribosomal protein S12 methylthiotransferase RimO 0.47 DDA3937_RS13070 purine nucleoside phosphoramidase low > 74
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_2522 SSU ribosomal protein S12P methylthiotransferase (EC 2.-.-.-) 0.46 B158DRAFT_0741 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 40
Azospirillum sp. SherDot2 0.70 MPMX19_05761 Ribosomal protein S12 methylthiotransferase RimO 0.32 MPMX19_02540 Purine nucleoside phosphoramidase low > 112
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO 0.49 CSW01_09495 histidine triad nucleotide-binding protein low > 62
Rhodospirillum rubrum S1H 0.69 Rru_A2811 hypothetical protein (NCBI) 0.38 Rru_A3592 Histidine triad (HIT) protein (NCBI) — —
Alteromonas macleodii MIT1002 0.68 MIT1002_01933 Ribosomal protein S12 methylthiotransferase RimO 0.63 MIT1002_00744 HIT-like protein low > 70
Magnetospirillum magneticum AMB-1 0.66 AMB_RS15345 30S ribosomal protein S12 methylthiotransferase RimO 0.36 AMB_RS22915 histidine triad nucleotide-binding protein low > 64
Lysobacter sp. OAE881 0.65 ABIE51_RS08160 30S ribosomal protein S12 methylthiotransferase RimO 0.51 ABIE51_RS14005 histidine triad nucleotide-binding protein low > 62
Shewanella amazonensis SB2B 0.65 Sama_0485 MiaB-like putative RNA modifying enzyme YliG (RefSeq) 0.49 Sama_1448 HIT family protein (RefSeq) low > 62
Dechlorosoma suillum PS 0.65 Dsui_2540 ribosomal protein S12 methylthiotransferase RimO 0.43 Dsui_1421 HIT family hydrolase, diadenosine tetraphosphate hydrolase low > 51
Rhodanobacter denitrificans MT42 0.64 LRK55_RS01560 30S ribosomal protein S12 methylthiotransferase RimO 0.55 LRK55_RS01015 histidine triad nucleotide-binding protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS01780 30S ribosomal protein S12 methylthiotransferase RimO 0.56 LRK54_RS01245 histidine triad nucleotide-binding protein low > 59
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS09170 ribosomal protein S12 methylthiotransferase RimO 0.41 BPHYT_RS17660 HIT family hydrolase — —
Shewanella sp. ANA-3 0.64 Shewana3_3627 MiaB-like tRNA modifying enzyme YliG (RefSeq) 0.49 Shewana3_2507 histidine triad (HIT) protein (RefSeq) low > 73
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_04755 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.59 OKGIIK_05660 hinT histidine triad nucleotide-binding protein low > 52
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS07640 ribosomal protein S12 methylthiotransferase 0.46 RR42_RS18865 hydrolase low > 128
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS22185 30S ribosomal protein S12 methylthiotransferase RimO 0.42 QEN71_RS27815 histidine triad nucleotide-binding protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00855 SSU ribosomal protein S12P methylthiotransferase 0.42 H281DRAFT_05663 histidine triad (HIT) family protein low > 103
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS08100 30S ribosomal protein S12 methylthiotransferase RimO 0.58 ABZR86_RS06230 histidine triad nucleotide-binding protein low > 74
Shewanella oneidensis MR-1 0.63 SO4072 yliG MiaB-like putative RNA modifying enzyme YliG (NCBI ptt file) 0.49 SO2723 HIT family protein (NCBI ptt file) — —
Paraburkholderia graminis OAS925 0.63 ABIE53_002068 ribosomal protein S12 methylthiotransferase 0.41 ABIE53_003691 histidine triad (HIT) family protein low > 113
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_0282 ribosomal protein S12 methylthiotransferase RimO 0.32 Ga0059261_1052 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 68
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS15005 ribosomal protein S12 methylthiotransferase 0.44 HSERO_RS20300 HIT family hydrolase — —
Dinoroseobacter shibae DFL-12 0.62 Dshi_2618 MiaB-like tRNA modifying enzyme YliG (RefSeq) 0.34 Dshi_0679 histidine triad (HIT) protein (RefSeq) low > 64
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF4923 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.44 GFF1304 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 90
Variovorax sp. SCN45 0.61 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) 0.48 GFF5361 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.47 61
Variovorax sp. OAS795 0.61 ABID97_RS17220 30S ribosomal protein S12 methylthiotransferase RimO 0.48 ABID97_RS23085 histidine triad nucleotide-binding protein low > 91
Acidovorax sp. GW101-3H11 0.60 Ac3H11_364 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.44 Ac3H11_4739 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 79
Phaeobacter inhibens DSM 17395 0.59 PGA1_c24370 ribosomal protein S12 methylthiotransferase RimO 0.30 PGA1_c06720 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 62
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_2512 hypothetical protein 0.60 Synpcc7942_1390 protein kinase C inhibitor low > 38

Not shown: 20 genomes with orthologs for AO353_16875 only; 9 genomes with orthologs for AO353_07180 only