| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS13545 | | amino acid permease | 1.0 | ABZR87_RS06280 | | carboxyl transferase domain-containing protein | 0.44 | 13 |
| Ralstonia solanacearum PSI07 | 0.91 | RPSI07_RS15760 | | amino acid permease | 0.99 | RPSI07_RS22835 | | methylcrotonoyl-CoA carboxylase | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.90 | RALBFv3_RS01725 | | amino acid permease | 0.98 | RALBFv3_RS10480 | | methylcrotonoyl-CoA carboxylase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.90 | UW163_RS15035 | | amino acid permease | 0.98 | UW163_RS03100 | | methylcrotonoyl-CoA carboxylase | — | — |
| Ralstonia solanacearum GMI1000 | 0.88 | RS_RS08000 | | amino acid permease | 0.98 | RS_RS01320 | | methylcrotonoyl-CoA carboxylase | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.79 | RR42_RS01585 | | amino acid permease | 0.91 | RR42_RS26905 | | methylcrotonoyl-CoA carboxylase | low | > 128 |
| Paraburkholderia graminis OAS925 | 0.73 | ABIE53_000447 | | APA family basic amino acid/polyamine antiporter | 0.86 | ABIE53_005466 | | 3-methylcrotonyl-CoA carboxylase beta subunit | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS00500 | | amino acid permease | 0.86 | QEN71_RS12865 | | carboxyl transferase domain-containing protein | 0.37 | 103 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_02180 | | amino acid/polyamine/organocation transporter, APC superfamily | 0.86 | H281DRAFT_01345 | | 3-methylcrotonyl-CoA carboxylase beta subunit | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.69 | BPHYT_RS01785 | | amino acid permease | 0.86 | BPHYT_RS23265 | | methylcrotonoyl-CoA carboxylase | low | > 109 |
| Bifidobacterium breve UCC2003 | 0.55 | BBR_RS13165 | | amino acid permease | 0.24 | BBR_RS19375 | | acyl-CoA carboxylase subunit beta | low | > 34 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.46 | CA264_09570 | | amino acid permease | 0.48 | CA264_20625 | | methylcrotonoyl-CoA carboxylase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_05010 | potE | amino acid permease | 0.77 | OKGIIK_04015 | | Methylcrotonoyl-CoA carboxylase | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS06670 | | amino acid permease | 0.78 | ABZR86_RS20580 | | carboxyl transferase domain-containing protein | 0.32 | 46 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.45 | CA265_RS17395 | | amino acid transporter | 0.48 | CA265_RS10640 | | methylcrotonoyl-CoA carboxylase | low | > 88 |
| Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS01525 | | amino acid permease | 0.77 | LRK54_RS15255 | | methylcrotonoyl-CoA carboxylase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS01315 | | amino acid permease | 0.77 | LRK55_RS14970 | | carboxyl transferase domain-containing protein | low | > 63 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.2936.1 | | Amino acid transporters | 0.77 | Xcc-8004.319.1 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | 0.32 | 67 |
| Parabacteroides merdae CL09T00C40 | 0.43 | HMPREF1078_RS09620 | | amino acid permease | 0.26 | HMPREF1078_RS00210 | | acyl-CoA carboxylase subunit beta | low | > 61 |
| Phocaeicola vulgatus CL09T03C04 | 0.43 | HMPREF1058_RS13815 | | amino acid permease | 0.23 | HMPREF1058_RS16505 | | acyl-CoA carboxylase subunit beta | low | > 67 |
| Lysobacter sp. OAE881 | 0.43 | ABIE51_RS13265 | | amino acid permease | 0.75 | ABIE51_RS13160 | | carboxyl transferase domain-containing protein | low | > 62 |
| Caulobacter crescentus NA1000 | 0.42 | CCNA_01242 | | amino acid permease | 0.72 | CCNA_02252 | | methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 66 |
| Rhodopseudomonas palustris CGA009 | 0.42 | TX73_003040 | | amino acid permease | 0.74 | TX73_013115 | | carboxyl transferase domain-containing protein | 0.33 | 20 |
| Caulobacter crescentus NA1000 Δfur | 0.42 | CCNA_01242 | | amino acid permease | 0.72 | CCNA_02252 | | methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 67 |
| Sphingomonas koreensis DSMZ 15582 | 0.41 | Ga0059261_1053 | | amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) | 0.71 | Ga0059261_4055 | | Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | low | > 68 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.39 | ABZR88_RS11630 | | amino acid permease | 0.48 | ABZR88_RS10315 | | acyl-CoA carboxylase subunit beta | low | > 71 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.37 | A4249_RS05420 | | amino acid permease | 0.72 | A4249_RS03795 | | carboxyl transferase domain-containing protein | low | > 48 |
| Mycobacterium tuberculosis H37Rv | 0.36 | Rv2320c | | Probable cationic amino acid transport integral membrane protein RocE | 0.70 | Rv2502c | | Probable acetyl-/propionyl-CoA carboxylase (beta subunit) AccD1 | low | > 58 |
| Bosea sp. OAE506 | 0.14 | ABIE41_RS20970 | | APC family permease | 0.73 | ABIE41_RS14815 | | carboxyl transferase domain-containing protein | low | > 77 |
| Pseudomonas putida KT2440 | 0.13 | PP_0544 | | Ethanolamine transporter | 0.74 | PP_4065 | | methylcrotonyl-CoA carboxylase biotin-containing subunit beta | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.12 | Pf6N2E2_2179 | | Putrescine importer | 0.73 | Pf6N2E2_2192 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 103 |
| Pseudomonas sp. RS175 | 0.12 | PFR28_01269 | | Putrescine importer PuuP | 0.73 | PFR28_01259 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.12 | Psest_0670 | | ethanolamine permease | 0.71 | Psest_1083 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 67 |
| Pseudomonas fluorescens FW300-N1B4 | 0.12 | Pf1N1B4_5855 | | Putrescine importer | 0.73 | Pf1N1B4_3986 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.12 | AO356_01520 | | porin | 0.73 | AO356_01585 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.12 | AO353_27910 | | porin | 0.72 | AO353_20345 | | methylcrotonoyl-CoA carboxylase | low | > 101 |
| Shewanella sp. ANA-3 | 0.12 | Shewana3_3634 | | amino acid permease-associated region (RefSeq) | 0.76 | Shewana3_1671 | | carboxyl transferase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.12 | SO4081 | | amino acid permease (NCBI ptt file) | 0.75 | SO1896 | pccB-1 | 3-methylcrotonyl CoA carboxylase, beta subunit (NCBI ptt file) | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.11 | MPMX26_01769 | | putative amino acid permease YhdG | 0.77 | MPMX26_00631 | | Propionyl-CoA carboxylase beta chain | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.11 | Psyr_2379 | | amino acid/polyamine/organocation transporter, APC superfamily | 0.72 | Psyr_2469 | | Propionyl-CoA carboxylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.11 | Psyr_2379 | | amino acid/polyamine/organocation transporter, APC superfamily | 0.72 | Psyr_2469 | | Propionyl-CoA carboxylase | low | > 86 |
| Rhizobium sp. OAE497 | 0.11 | ABIE40_RS17315 | | APC family permease | 0.73 | ABIE40_RS20780 | | carboxyl transferase domain-containing protein | low | > 107 |
| Herbaspirillum seropedicae SmR1 | 0.11 | HSERO_RS12590 | | ethanolamin permease | 0.85 | HSERO_RS23455 | | methylcrotonoyl-CoA carboxylase | low | > 78 |
| Variovorax sp. OAS795 | 0.10 | ABID97_RS19505 | | ethanolamine permease | 0.79 | ABID97_RS25130 | | carboxyl transferase domain-containing protein | low | > 91 |
| Azospirillum sp. SherDot2 | 0.10 | MPMX19_05701 | | Putrescine transporter PotE | 0.78 | MPMX19_03938 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 112 |
| Rhodospirillum rubrum S1H | 0.10 | Rru_A1030 | | Amino acid permease-associated region (NCBI) | 0.72 | Rru_A1943 | | Propionyl-CoA carboxylase (NCBI) | low | > 58 |
| Agrobacterium fabrum C58 | 0.09 | Atu2143 | | ABC transporter, membrane spanning protein (amino acid) | 0.78 | Atu3478 | | 3-methylcrotonoyl-CoA carboxylase beta subunit | low | > 89 |
| Pseudomonas sp. S08-1 | 0.09 | OH686_03555 | | Lysine/cadaverine antiporter membrane protein CadB | 0.72 | OH686_00850 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 80 |
| Sinorhizobium meliloti 1021 | 0.08 | SMc02616 | | permease transmembrane protein | 0.73 | SM_b21122 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 103 |
| Marinobacter adhaerens HP15 | 0.08 | HP15_180 | | amino acid transporter | 0.76 | HP15_1004 | | 3-methylcrotonyl CoA carboxylase, beta subunit | low | > 73 |
| Dinoroseobacter shibae DFL-12 | 0.07 | Dshi_3942 | | amino acid permease-associated region (RefSeq) | 0.68 | Dshi_1300 | | Propionyl-CoA carboxylase (RefSeq) | — | — |
Not shown: 24 genomes with orthologs for ABZR87_RS13545 only; 22 genomes with orthologs for ABZR87_RS06280 only