| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. OAS795 | 1.0 | ABID97_RS00330 | | efflux transporter outer membrane subunit | 1.0 | ABID97_RS23210 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.47 | 19 |
| Variovorax sp. SCN45 | 0.80 | GFF3724 | | Efflux transport system, outer membrane factor (OMF) lipoprotein | 0.93 | GFF5335 | | Phospholipid ABC transporter permease protein MlaE | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_4447 | | RND efflux system, outer membrane lipoprotein CmeC | 0.85 | Ac3H11_4713 | | Uncharacterized ABC transporter, permease component YrbE | low | > 79 |
| Paraburkholderia sabiae LMG 24235 | 0.50 | QEN71_RS02530 | | efflux transporter outer membrane subunit | 0.70 | QEN71_RS27915 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 153 |
| Pseudomonas aeruginosa PA14 | 0.50 | IKLFDK_23285 | | multidrug efflux RND transporter outer membrane channel subunit OprM | 0.51 | IKLFDK_01810 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 101 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.50 | GFF3841 | | RND efflux system, outer membrane lipoprotein CmeC | 0.73 | GFF1324 | | Uncharacterized ABC transporter, permease component YrbE | low | > 90 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.49 | H281DRAFT_04169 | | outer membrane protein, multidrug efflux system | 0.73 | H281DRAFT_05642 | | phospholipid/cholesterol/gamma-HCH transport system permease protein | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_4009 | | RND efflux system, outer membrane lipoprotein, NodT | 0.50 | Psyr_4140 | | Protein of unknown function DUF140 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_4009 | | RND efflux system, outer membrane lipoprotein, NodT | 0.50 | Psyr_4140 | | Protein of unknown function DUF140 | low | > 86 |
| Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS02405 | | multidrug transporter | 0.64 | HSERO_RS20395 | | ABC transporter permease | — | — |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS16165 | | multidrug transporter | 0.66 | BPHYT_RS17760 | | ABC transporter permease | — | — |
| Pseudomonas sp. RS175 | 0.47 | PFR28_00630 | | putative efflux pump outer membrane protein TtgC | 0.51 | PFR28_00180 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_17290 | | multidrug transporter | 0.50 | AO353_05145 | | ABC transporter permease | 0.35 | 69 |
| Cupriavidus basilensis FW507-4G11 | 0.46 | RR42_RS20655 | | multidrug transporter | 0.72 | RR42_RS18965 | | ABC transporter permease | 0.40 | 20 |
| Pseudomonas fluorescens FW300-N1B4 | 0.46 | Pf1N1B4_3245 | | RND efflux system, outer membrane lipoprotein, NodT family | 0.50 | Pf1N1B4_1073 | | Uncharacterized ABC transporter, permease component YrbE | — | — |
| Rhodospirillum rubrum S1H | 0.46 | Rru_A2052 | | RND efflux system, outer membrane lipoprotein, NodT (NCBI) | 0.28 | Rru_A0408 | | Protein of unknown function DUF140 (NCBI) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_30435 | | multidrug transporter | 0.51 | AO356_07000 | | ABC transporter permease | low | > 104 |
| Pseudomonas stutzeri RCH2 | 0.46 | Psest_0311 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.51 | Psest_3306 | | conserved hypothetical integral membrane protein | 0.24 | 59 |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_2825 | | RND efflux system, outer membrane lipoprotein CmeC | 0.51 | Pf6N2E2_3259 | | Uncharacterized ABC transporter, permease component YrbE | — | — |
| Pseudomonas sp. DMC3 | 0.45 | GFF2211 | | putative efflux pump outer membrane protein TtgC | 0.50 | GFF1835 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 89 |
| Pseudomonas sp. SVBP6 | 0.45 | COO64_RS26280 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.50 | COO64_RS04320 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 93 |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS03385 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.66 | RPSI07_RS10340 | | ABC transporter permease | low | > 81 |
| Pseudomonas sp. BP01 | 0.45 | JOY50_RS14440 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.51 | JOY50_RS11165 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 84 |
| Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_4582 | | RND efflux system, outer membrane lipoprotein CmeC | 0.50 | PfGW456L13_5007 | | Uncharacterized ABC transporter, permease component YrbE | — | — |
| Pseudomonas simiae WCS417 | 0.45 | PS417_06765 | | multidrug transporter | 0.50 | PS417_04380 | | ABC transporter permease | — | — |
| Pseudomonas putida KT2440 | 0.45 | PP_1384 | | Probable efflux pump outer membrane protein TtgC | 0.51 | PP_0959 | | phospholipid ABC transporter | 0.42 | 12 |
| Pseudomonas fluorescens SBW25-INTG | 0.44 | PFLU_RS06800 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.50 | PFLU_RS04435 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.27 | 86 |
| Pseudomonas fluorescens SBW25 | 0.44 | PFLU_RS06800 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.50 | PFLU_RS04435 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 109 |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS18290 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.48 | ABZR86_RS11880 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 74 |
| Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS19800 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | 0.67 | RALBFv3_RS06895 | | ABC transporter permease | — | — |
| Methylophilus sp. DMC18 | 0.44 | GFF2592 | | Outer membrane protein OprM | 0.59 | GFF1552 | | Intermembrane phospholipid transport system permease protein MlaE | — | — |
| Ralstonia solanacearum UW163 | 0.44 | UW163_RS19375 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | 0.67 | UW163_RS06720 | | ABC transporter permease | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.1795.1 | | RND efflux system, outer membrane lipoprotein CmeC | 0.44 | Xcc-8004.5365.1 | | Uncharacterized ABC transporter, permease component YrbE | low | > 74 |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS05320 | | efflux transporter outer membrane subunit | 0.67 | ABZR87_RS02550 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 80 |
| Rahnella sp. WP5 | 0.43 | EX31_RS13330 | | efflux transporter outer membrane subunit | 0.53 | EX31_RS12440 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 89 |
| Pseudomonas sp. S08-1 | 0.43 | OH686_16055 | | Multidrug efflux system, outer membrane factor lipoprotein | 0.51 | OH686_08505 | | Phospholipid ABC transporter permease protein MlaE | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS21025 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | 0.67 | RS_RS14840 | | ABC transporter permease | low | > 80 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.40 | DVU2815 | | outer membrane efflux protein (TIGR) | 0.35 | DVU1246 | | membrane protein, putative (TIGR) | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.40 | GFF4245 | | RND efflux system, outer membrane lipoprotein CmeC | 0.52 | GFF2938 | | Uncharacterized ABC transporter, permease component YrbE | low | > 78 |
| Serratia liquefaciens MT49 | 0.39 | IAI46_16730 | | efflux transporter outer membrane subunit | 0.54 | IAI46_22425 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 86 |
| Castellaniella sp019104865 MT123 | 0.38 | ABCV34_RS04220 | | efflux transporter outer membrane subunit | 0.67 | ABCV34_RS11185 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Acinetobacter radioresistens SK82 | 0.35 | MPMX26_00688 | | Outer membrane protein OprM | 0.49 | MPMX26_02740 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 36 |
| Dechlorosoma suillum PS | 0.35 | Dsui_3183 | | efflux transporter, outer membrane factor lipoprotein, NodT family | 0.57 | Dsui_1399 | | conserved hypothetical integral membrane protein | — | — |
| Dickeya dadantii 3937 | 0.34 | DDA3937_RS14115 | | efflux transporter outer membrane subunit | 0.53 | DDA3937_RS01570 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 74 |
| Enterobacter asburiae PDN3 | 0.34 | EX28DRAFT_3935 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.51 | EX28DRAFT_3248 | | ABC transport permease subunit | low | > 76 |
| Dickeya dianthicola 67-19 | 0.34 | HGI48_RS14115 | | efflux transporter outer membrane subunit | 0.53 | HGI48_RS01485 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 71 |
| Klebsiella michiganensis M5al | 0.34 | BWI76_RS27700 | | multidrug transporter | 0.52 | BWI76_RS25225 | | ABC transporter permease | low | > 92 |
| Enterobacter sp. TBS_079 | 0.33 | MPMX20_00056 | | Outer membrane protein OprM | 0.52 | MPMX20_04100 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 85 |
| Escherichia coli ECRC101 | 0.32 | MCAODC_26915 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.52 | MCAODC_08500 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 87 |
| Escherichia fergusonii Becca | 0.32 | EFB2_03522 | | Cation efflux system protein CusC | 0.52 | EFB2_00629 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 86 |
| Escherichia coli ECRC98 | 0.32 | JDDGAC_11345 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.52 | JDDGAC_21605 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 86 |
| Escherichia coli Nissle 1917 | 0.32 | ECOLIN_RS03130 | | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.52 | ECOLIN_RS18385 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Escherichia coli ECRC100 | 0.32 | OKFHMN_07700 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.52 | OKFHMN_17980 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 80 |
| Escherichia coli ECOR38 | 0.32 | HEPCGN_00590 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.52 | HEPCGN_16855 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 87 |
| Escherichia coli ECRC99 | 0.32 | KEDOAH_20270 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.52 | KEDOAH_10170 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Escherichia coli ECRC102 | 0.32 | NIAGMN_05755 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.52 | NIAGMN_15740 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Escherichia coli ECRC62 | 0.32 | BNILDI_22090 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.52 | BNILDI_01755 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Escherichia coli ECOR27 | 0.32 | NOLOHH_24080 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.52 | NOLOHH_09780 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Escherichia coli BW25113 | 0.32 | b0572 | cusC | copper/silver efflux system, outer membrane component (NCBI) | 0.52 | b3194 | yrbE | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.32 | OHPLBJKB_03137 | | Cation efflux system protein CusC | 0.52 | OHPLBJKB_00506 | | putative phospholipid ABC transporter permease protein MlaE | low | > 73 |
| Escherichia coli BL21 | 0.32 | ECD_00533 | | copper/silver efflux system, outer membrane component | 0.52 | ECD_03059 | | ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein | low | > 61 |
| Shewanella sp. ANA-3 | 0.30 | Shewana3_4297 | | copper/silver efflux system outer membrane protein CusC (RefSeq) | 0.51 | Shewana3_0679 | | hypothetical protein (RefSeq) | low | > 73 |
| Dickeya dianthicola ME23 | 0.30 | DZA65_RS03600 | | efflux transporter outer membrane subunit | 0.53 | DZA65_RS01550 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Desulfovibrio vulgaris Miyazaki F | 0.28 | DvMF_2162 | | RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) | 0.35 | DvMF_0852 | | protein of unknown function DUF140 (RefSeq) | low | > 51 |
| Lysobacter sp. OAE881 | 0.24 | ABIE51_RS10130 | | efflux transporter outer membrane subunit | 0.37 | ABIE51_RS01010 | | MlaE family lipid ABC transporter permease subunit | low | > 62 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.21 | CA265_RS05050 | | RND transporter | 0.19 | CA265_RS16015 | | ABC transporter permease | 0.24 | 48 |
| Pantoea sp. MT58 | 0.21 | IAI47_12395 | | efflux transporter outer membrane subunit | 0.54 | IAI47_17140 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.21 | LU632_RS09495 | | efflux transporter outer membrane subunit | 0.54 | LU632_RS21240 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 74 |
| Erwinia amylovora T8 | 0.21 | OLJFJH_15745 | | transporter | 0.54 | OLJFJH_07110 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 58 |
| Shewanella oneidensis MR-1 | 0.18 | SO0822 | | outer membrane efflux family protein (NCBI ptt file) | 0.51 | SO3953 | | conserved hypothetical protein TIGR00056 (NCBI ptt file) | low | > 76 |
Not shown: 15 genomes with orthologs for ABID97_RS00330 only; 16 genomes with orthologs for ABID97_RS23210 only