| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Brevundimonas sp. GW460-12-10-14-LB2 | 1.0 | A4249_RS10005 | | 3-isopropylmalate dehydratase large subunit | 1.0 | A4249_RS02425 | | LL-diaminopimelate aminotransferase | 1.00 | 1 |
| Azospirillum sp. SherDot2 | 0.54 | MPMX19_01998 | | 3-isopropylmalate dehydratase large subunit | 0.66 | MPMX19_00804 | | Glutamate-pyruvate aminotransferase AlaC | — | — |
| Escherichia fergusonii Becca | 0.53 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | 0.54 | EFB2_01495 | | Glutamate-pyruvate aminotransferase AlaC | low | > 86 |
| Rhodospirillum rubrum S1H | 0.53 | Rru_A1189 | | 3-isopropylmalate dehydratase large subunit region (NCBI) | 0.69 | Rru_A2411 | | Aminotransferase, class I and II (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.53 | AMB_RS20560 | | 3-isopropylmalate dehydratase large subunit | 0.67 | AMB_RS18860 | | pyridoxal phosphate-dependent aminotransferase | — | — |
| Escherichia coli ECRC101 | 0.53 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.54 | MCAODC_12900 | alaC | alanine transaminase | low | > 87 |
| Escherichia coli ECRC100 | 0.53 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.54 | OKFHMN_22370 | alaC | alanine transaminase | low | > 80 |
| Escherichia coli ECRC102 | 0.53 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.54 | NIAGMN_20145 | alaC | alanine transaminase | — | — |
| Escherichia coli ECRC98 | 0.53 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.54 | JDDGAC_26335 | alaC | alanine transaminase | low | > 86 |
| Escherichia coli ECRC99 | 0.53 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.54 | KEDOAH_05850 | alaC | alanine transaminase | — | — |
| Klebsiella michiganensis M5al | 0.53 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | 0.55 | BWI76_RS20495 | | alanine transaminase | low | > 92 |
| Escherichia coli BL21 | 0.53 | ECD_00074 | | 3-isopropylmalate dehydratase large subunit | 0.54 | ECD_02289 | | glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase | low | > 61 |
| Escherichia coli ECOR38 | 0.53 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.54 | HEPCGN_21580 | alaC | alanine transaminase | low | > 87 |
| Escherichia coli ECRC62 | 0.53 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.54 | BNILDI_12910 | alaC | alanine transaminase | low | > 75 |
| Escherichia coli Nissle 1917 | 0.53 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | 0.54 | ECOLIN_RS13690 | | alanine transaminase | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.53 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | 0.54 | OHPLBJKB_01342 | | Glutamate-pyruvate aminotransferase AlaC | low | > 73 |
| Escherichia coli BW25113 | 0.53 | b0072 | leuC | isopropylmalate isomerase large subunit (NCBI) | 0.54 | b2379 | yfdZ | hypothetical protein (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.53 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.54 | NOLOHH_14055 | alaC | alanine transaminase | low | > 75 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.53 | CA264_09435 | | 3-isopropylmalate dehydratase large subunit | 0.21 | CA264_01550 | | aminotransferase | low | > 74 |
| Enterobacter sp. TBS_079 | 0.52 | MPMX20_00767 | | 3-isopropylmalate dehydratase large subunit 1 | 0.55 | MPMX20_03277 | | Glutamate-pyruvate aminotransferase AlaC | low | > 85 |
| Enterobacter asburiae PDN3 | 0.52 | EX28DRAFT_3668 | | 3-isopropylmalate dehydratase, large subunit | 0.55 | EX28DRAFT_0240 | | Aspartate/tyrosine/aromatic aminotransferase | low | > 76 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS03545 | | isopropylmalate isomerase | 0.67 | AZOBR_RS07830 | | aminotransferase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.52 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.62 | CCNA_01446 | | LL-diaminopimelate aminotransferase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.52 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.62 | CCNA_01446 | | LL-diaminopimelate aminotransferase | low | > 66 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.52 | GFF166 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.55 | GFF1970 | | Uncharacterized PLP-dependent aminotransferase YfdZ | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS03075 | | 3-isopropylmalate dehydratase large subunit | 0.55 | HER17_RS06655 | | alanine transaminase | low | > 75 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.51 | Echvi_2059 | | 3-isopropylmalate dehydratase, large subunit | 0.26 | Echvi_0124 | | Aspartate/tyrosine/aromatic aminotransferase | low | > 79 |
| Sinorhizobium meliloti 1021 | 0.51 | SMc03823 | | isopropylmalate isomerase large subunit | 0.65 | SMc00294 | | aminotransferase | 0.92 | 30 |
| Rahnella sp. WP5 | 0.51 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | 0.55 | EX31_RS20015 | | alanine transaminase | low | > 89 |
| Serratia liquefaciens MT49 | 0.51 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | 0.55 | IAI46_18180 | | alanine transaminase | low | > 86 |
| Dickeya dadantii 3937 | 0.51 | DDA3937_RS18125 | | 3-isopropylmalate dehydratase large subunit | 0.54 | DDA3937_RS14825 | | alanine transaminase | low | > 74 |
| Pantoea sp. MT58 | 0.50 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | 0.55 | IAI47_05575 | | alanine transaminase | low | > 76 |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_001245 | | 3-isopropylmalate dehydratase large subunit | 0.62 | TX73_012935 | | LL-diaminopimelate aminotransferase | — | — |
| Dickeya dianthicola ME23 | 0.50 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | 0.54 | DZA65_RS15705 | | alanine transaminase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.50 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | 0.54 | HGI48_RS14755 | | alanine transaminase | low | > 71 |
| Rhizobium sp. OAE497 | 0.50 | ABIE40_RS18380 | | 3-isopropylmalate dehydratase large subunit | 0.65 | ABIE40_RS08645 | | LL-diaminopimelate aminotransferase | 0.87 | 68 |
| Bosea sp. OAE506 | 0.50 | ABIE41_RS11660 | | 3-isopropylmalate dehydratase large subunit | 0.64 | ABIE41_RS19175 | | LL-diaminopimelate aminotransferase | — | — |
| Agrobacterium fabrum C58 | 0.50 | Atu2709 | | 3-isopropylmalate dehydratase, large subunit | 0.63 | Atu1589 | | aminotransferase, class I | 0.92 | 14 |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | 0.57 | ABCV34_RS02290 | | alanine transaminase | low | > 48 |
| Phocaeicola dorei CL03T12C01 | 0.49 | ABI39_RS10200 | | 3-isopropylmalate dehydratase large subunit | 0.31 | ABI39_RS10505 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.81 | 28 |
| Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.54 | PFLU_RS23580 | | alanine transaminase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.54 | PFLU_RS23580 | | alanine transaminase | low | > 109 |
| Pseudomonas putida KT2440 | 0.49 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | 0.55 | PP_0817 | | aminotransferase | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.55 | Pf6N2E2_2862 | | Uncharacterized PLP-dependent aminotransferase YfdZ | low | > 103 |
| Pseudomonas simiae WCS417 | 0.49 | PS417_18600 | | isopropylmalate isomerase | 0.55 | PS417_21975 | | glutamate-pyruvate aminotransferase | low | > 88 |
| Phocaeicola vulgatus CL09T03C04 | 0.49 | HMPREF1058_RS14550 | | 3-isopropylmalate dehydratase large subunit | 0.31 | HMPREF1058_RS14790 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.85 | 13 |
| Pseudomonas fluorescens GW456-L13 | 0.49 | PfGW456L13_3948 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.55 | PfGW456L13_1928 | | Uncharacterized PLP-dependent aminotransferase YfdZ | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_21400 | | isopropylmalate isomerase | 0.55 | AO356_05050 | | glutamate-pyruvate aminotransferase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.49 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.55 | Pf1N1B4_555 | | Uncharacterized PLP-dependent aminotransferase YfdZ | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_20620 | | isopropylmalate isomerase | 0.55 | AO353_03235 | | glutamate-pyruvate aminotransferase | low | > 101 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_04480 | | 3-isopropylmalate dehydratase large subunit | 0.54 | OH686_04000 | | Glutamate-pyruvate aminotransferase AlaC | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.55 | Psyr_0468 | | Aminotransferase, class I and II | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.55 | Psyr_0468 | | Aminotransferase, class I and II | low | > 86 |
| Dechlorosoma suillum PS | 0.48 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | 0.55 | Dsui_2909 | | aspartate/tyrosine/aromatic aminotransferase | — | — |
| Pseudomonas sp. RS175 | 0.48 | PFR28_02824 | | 3-isopropylmalate dehydratase large subunit | 0.55 | PFR28_00596 | | Glutamate-pyruvate aminotransferase AlaC | low | > 88 |
| Bifidobacterium breve UCC2003 | 0.48 | BBR_RS19630 | | 3-isopropylmalate dehydratase large subunit | 0.26 | BBR_RS13460 | | aminotransferase | low | > 34 |
| Parabacteroides merdae CL09T00C40 | 0.48 | HMPREF1078_RS16660 | | 3-isopropylmalate dehydratase large subunit | 0.29 | HMPREF1078_RS01130 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.96 | 13 |
| Bacteroides stercoris CC31F | 0.48 | HMPREF1181_RS14145 | | 3-isopropylmalate dehydratase large subunit | 0.30 | HMPREF1181_RS06565 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.92 | 19 |
| Sphingomonas koreensis DSMZ 15582 | 0.48 | Ga0059261_4223 | | 3-isopropylmalate dehydratase, large subunit | 0.88 | Ga0059261_1288 | | Aspartate/tyrosine/aromatic aminotransferase | low | > 68 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.48 | GFF3363 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.17 | GFF4553 | | N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) | low | > 90 |
| Synechococcus elongatus PCC 7942 | 0.48 | Synpcc7942_1898 | leuC | isopropylmalate isomerase large subunit | 0.38 | Synpcc7942_1794 | | succinyldiaminopimelate transaminase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.47 | BACOVA_04603 | | 3-isopropylmalate dehydratase, large subunit | 0.29 | BACOVA_01161 | | aminotransferase, class I/II | 0.93 | 37 |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_2591 | | 3-isopropylmalate dehydratase, large subunit | 0.15 | Psest_1470 | | succinyldiaminopimelate transaminase | low | > 67 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.47 | BT1860 | | 3-isopropylmalate dehydratase large subunit (NCBI ptt file) | 0.29 | BT3935 | | aminotransferase (NCBI ptt file) | 0.64 | 64 |
| Herbaspirillum seropedicae SmR1 | 0.47 | HSERO_RS16515 | | isopropylmalate isomerase | 0.54 | HSERO_RS12800 | | aspartate aminotransferase | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.47 | Ac3H11_1525 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.55 | Ac3H11_3720 | | Uncharacterized PLP-dependent aminotransferase YfdZ | low | > 79 |
| Cupriavidus basilensis FW507-4G11 | 0.46 | RR42_RS14400 | | isopropylmalate isomerase | 0.54 | RR42_RS28540 | | glutamate--pyruvate aminotransferase | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.16 | ABZR87_RS11770 | | succinyldiaminopimelate transaminase | 0.51 | 56 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.23 | DVU2982 | leuC | 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) | 0.54 | DVU0891 | | aminotransferase, classes I and II (TIGR) | low | > 55 |
| Methanococcus maripaludis JJ | 0.23 | MMJJ_RS06750 | | homoaconitase large subunit | 0.23 | MMJJ_RS06510 | | LL-diaminopimelate aminotransferase | 0.50 | 14 |
| Methanococcus maripaludis S2 | 0.23 | MMP_RS05930 | | 3-isopropylmalate dehydratase large subunit | 0.23 | MMP_RS07845 | | LL-diaminopimelate aminotransferase | 0.71 | 6 |
| Desulfovibrio vulgaris Miyazaki F | 0.22 | DvMF_1792 | | 3-isopropylmalate dehydratase large subunit (RefSeq) | 0.53 | DvMF_1411 | | aminotransferase class I and II (RefSeq) | low | > 51 |
Not shown: 31 genomes with orthologs for A4249_RS10005 only; 0 genomes with orthologs for A4249_RS02425 only