| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b3198 | kdsC | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | 1.0 | b3778 | rep | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | 0.34 | 17 |
| Escherichia coli ECRC101 | 1.00 | OKFHMN_17960 | kdsC | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.99 | OKFHMN_14610 | rep | DNA helicase Rep | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_08480 | kdsC | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.99 | MCAODC_05115 | rep | DNA helicase Rep | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_15720 | kdsC | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.99 | NIAGMN_12365 | rep | DNA helicase Rep | — | — |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_16835 | kdsC | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 1.00 | HEPCGN_13320 | rep | DNA helicase Rep | low | > 85 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_21585 | kdsC | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.99 | JDDGAC_18230 | rep | DNA helicase Rep | — | — |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_09760 | kdsC | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 1.00 | NOLOHH_06745 | rep | DNA helicase Rep | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_10190 | kdsC | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.99 | KEDOAH_13540 | rep | DNA helicase Rep | — | — |
| Escherichia coli ECRC62 | 1.00 | BNILDI_01775 | kdsC | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 1.00 | BNILDI_04780 | rep | DNA helicase Rep | — | — |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS18405 | | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.99 | ECOLIN_RS21690 | | DNA helicase Rep | low | > 52 |
| Escherichia coli BL21 | 1.00 | ECD_03063 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 1.00 | ECD_03656 | | DNA helicase and single-stranded DNA-dependent ATPase | — | — |
| Escherichia fergusonii Becca | 1.00 | EFB2_00625 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC | 0.97 | EFB2_04860 | | ATP-dependent DNA helicase Rep | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00502 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC | 1.00 | OHPLBJKB_04276 | | ATP-dependent DNA helicase Rep | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.97 | GFF2942 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) | 0.96 | GFF2894 | | ATP-dependent DNA helicase Rep | — | — |
| Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_3252 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | 0.93 | EX28DRAFT_4449 | | ATP-dependent DNA helicase Rep (EC 3.6.1.-) | — | — |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_04104 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC | 0.94 | MPMX20_04494 | | ATP-dependent DNA helicase Rep | — | — |
| Klebsiella michiganensis M5al | 0.85 | BWI76_RS25245 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.93 | BWI76_RS01020 | | DNA helicase Rep | — | — |
| Pantoea sp. MT58 | 0.82 | IAI47_17165 | | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.85 | IAI47_18545 | | DNA helicase Rep | — | — |
| Pectobacterium carotovorum WPP14 | 0.79 | HER17_RS20040 | | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.87 | HER17_RS01120 | | DNA helicase Rep | — | — |
| Erwinia tracheiphila SCR3 | 0.79 | LU632_RS21260 | kdsC | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.86 | LU632_RS24280 | rep | DNA helicase Rep | — | — |
| Rahnella sp. WP5 | 0.78 | EX31_RS12420 | | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.85 | EX31_RS15030 | | DNA helicase Rep | — | — |
| Serratia liquefaciens MT49 | 0.77 | IAI46_22450 | | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.87 | IAI46_00565 | | DNA helicase Rep | — | — |
| Dickeya dianthicola 67-19 | 0.77 | HGI48_RS01465 | | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.85 | HGI48_RS20245 | | DNA helicase Rep | — | — |
| Dickeya dianthicola ME23 | 0.77 | DZA65_RS01530 | | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.85 | DZA65_RS21290 | | DNA helicase Rep | — | — |
| Dickeya dadantii 3937 | 0.76 | DDA3937_RS01550 | | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.87 | DDA3937_RS20105 | | DNA helicase Rep | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.61 | CSW01_12795 | | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | 0.71 | CSW01_00865 | | DNA helicase Rep | — | — |
| Shewanella loihica PV-4 | 0.59 | Shew_3307 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) | 0.66 | Shew_0305 | | ATP-dependent DNA helicase Rep (RefSeq) | — | — |
| Kangiella aquimarina DSM 16071 | 0.54 | B158DRAFT_2084 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | 0.55 | B158DRAFT_0352 | | ATP-dependent DNA helicase Rep (EC 3.6.1.-) | — | — |
| Shewanella amazonensis SB2B | 0.53 | Sama_3084 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) | 0.66 | Sama_3266 | | ATP-dependent DNA helicase Rep (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.52 | Shewana3_0676 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) | 0.66 | Shewana3_0374 | | ATP-dependent DNA helicase Rep (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.52 | SO3957 | | conserved hypothetical protein (NCBI ptt file) | 0.65 | SO4325 | rep | ATP-dependent DNA helicase Rep (NCBI ptt file) | — | — |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_00831 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC | 0.65 | MIT1002_00071 | | ATP-dependent DNA helicase rep | — | — |
| Marinobacter adhaerens HP15 | 0.45 | HP15_2438 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | 0.50 | HP15_214 | | DNA helicase, ATP-dependent, RepA type | — | — |
| Pseudomonas simiae WCS417 | 0.44 | PS417_04365 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.52 | PS417_27670 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.44 | Pf1N1B4_1076 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) | 0.52 | Pf1N1B4_2151 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas fluorescens SBW25 | 0.44 | PFLU_RS04420 | | HAD family hydrolase | 0.52 | PFLU_RS29345 | | DNA helicase Rep | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_05160 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.52 | AO353_09120 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.44 | PFLU_RS04420 | | HAD family hydrolase | 0.52 | PFLU_RS29345 | | DNA helicase Rep | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.43 | ABZR86_RS19835 | | HAD family hydrolase | 0.41 | ABZR86_RS16790 | | UvrD-helicase domain-containing protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.43 | QEN71_RS01775 | | HAD family hydrolase | 0.42 | QEN71_RS29185 | | UvrD-helicase domain-containing protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.43 | PfGW456L13_5010 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) | 0.52 | PfGW456L13_819 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas sp. RS175 | 0.43 | PFR28_00177 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC | 0.51 | PFR28_04392 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_3309 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | 0.52 | Psest_3778 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.42 | AO356_07015 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.52 | AO356_12655 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.42 | Pf6N2E2_3263 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) | 0.52 | Pf6N2E2_4398 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas putida KT2440 | 0.42 | PP_0956 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.52 | PP_5264 | | helicase a single-stranded DNA dependent ATPase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.41 | Psyr_4143 | | HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI | 0.53 | Psyr_0075 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.41 | Psyr_4143 | | HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI | 0.53 | Psyr_0075 | | ATP-dependent DNA helicase Rep | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.41 | H281DRAFT_01923 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) | 0.42 | H281DRAFT_02416 | | ATP-dependent DNA helicase Rep | — | — |
| Paraburkholderia graminis OAS925 | 0.41 | ABIE53_000722 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) | 0.42 | ABIE53_000233 | | ATP-dependent DNA helicase Rep | — | — |
| Ralstonia solanacearum GMI1000 | 0.40 | RS_RS02040 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.41 | RS_RS16480 | | ATP-dependent DNA helicase Rep | low | > 80 |
| Rhodanobacter denitrificans MT42 | 0.40 | LRK55_RS12595 | | HAD hydrolase family protein | 0.41 | LRK55_RS10435 | | UvrD-helicase domain-containing protein | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.40 | LRK54_RS12895 | | HAD hydrolase family protein | 0.41 | LRK54_RS10795 | | UvrD-helicase domain-containing protein | — | — |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS02925 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.42 | BPHYT_RS19305 | | ATP-dependent DNA helicase Rep | — | — |
| Pseudomonas sp. S08-1 | 0.39 | OH686_08520 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.51 | OH686_13715 | | ATP-dependent DNA helicase Rep | — | — |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_02285 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC | 0.41 | OKGIIK_13085 | rep | ATP-dependent DNA helicase Rep | — | — |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS19835 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.42 | HSERO_RS21590 | | ATP-dependent DNA helicase Rep | 0.29 | 52 |
| Ralstonia sp. UNC404CL21Col | 0.39 | ABZR87_RS07080 | | HAD family hydrolase | 0.41 | ABZR87_RS03915 | | UvrD-helicase domain-containing protein | low | > 80 |
| Acinetobacter radioresistens SK82 | 0.37 | MPMX26_01968 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC | 0.49 | MPMX26_02416 | | ATP-dependent DNA helicase Rep | — | — |
| Ralstonia solanacearum PSI07 | 0.37 | RPSI07_RS22110 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.41 | RPSI07_RS08600 | | ATP-dependent DNA helicase Rep | low | > 81 |
| Castellaniella sp019104865 MT123 | 0.37 | ABCV34_RS14365 | | HAD hydrolase family protein | 0.38 | ABCV34_RS11065 | | UvrD-helicase domain-containing protein | — | — |
| Dechlorosoma suillum PS | 0.37 | Dsui_1381 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | 0.45 | Dsui_0933 | | DNA/RNA helicase, superfamily I | — | — |
| Variovorax sp. OAS795 | 0.36 | ABID97_RS02625 | | HAD hydrolase family protein | 0.36 | ABID97_RS05510 | | UvrD-helicase domain-containing protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.35 | RALBFv3_RS11190 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.41 | RALBFv3_RS08635 | | ATP-dependent DNA helicase Rep | low | > 76 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.35 | Xcc-8004.1666.1 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) | 0.39 | Xcc-8004.5266.1 | | ATP-dependent DNA helicase Rep | — | — |
| Ralstonia solanacearum UW163 | 0.35 | UW163_RS02390 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | 0.41 | UW163_RS04975 | | ATP-dependent DNA helicase Rep | — | — |
| Lysobacter sp. OAE881 | 0.35 | ABIE51_RS15935 | | HAD hydrolase family protein | 0.36 | ABIE51_RS00370 | | UvrD-helicase domain-containing protein | — | — |
| Variovorax sp. SCN45 | 0.33 | GFF3270 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) | 0.38 | GFF5842 | | ATP-dependent DNA helicase Rep | — | — |
| Acidovorax sp. GW101-3H11 | 0.31 | Ac3H11_4271 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) | 0.35 | Ac3H11_866 | | ATP-dependent DNA helicase Rep | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.26 | GFF2443 | | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) | 0.35 | GFF1778 | | ATP-dependent DNA helicase Rep | 0.54 | 52 |
Not shown: 13 genomes with orthologs for b3198 only; 1 genomes with orthologs for b3778 only