Conservation of cofitness between b1702 and b3169 in Escherichia coli BW25113

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1702 pps phosphoenolpyruvate synthase (NCBI) 1.0 b3169 nusA transcription elongation factor NusA (NCBI) 0.35 19
Escherichia coli ECOR27 1.00 NOLOHH_17665 ppsA phosphoenolpyruvate synthase 1.00 NOLOHH_09905 nusA Transcription termination/antitermination protein NusA — —
Escherichia coli ECRC62 1.00 BNILDI_16455 ppsA phosphoenolpyruvate synthase 1.00 BNILDI_01630 nusA Transcription termination/antitermination protein NusA — —
Escherichia coli ECRC98 1.00 JDDGAC_01720 ppsA phosphoenolpyruvate synthase 1.00 JDDGAC_21730 nusA Transcription termination/antitermination protein NusA — —
Escherichia coli ECRC101 1.00 MCAODC_18265 ppsA phosphoenolpyruvate synthase 1.00 MCAODC_08625 nusA Transcription termination/antitermination protein NusA — —
Escherichia coli ECRC101 1.00 OKFHMN_27145 ppsA phosphoenolpyruvate synthase 1.00 OKFHMN_18105 nusA Transcription termination/antitermination protein NusA — —
Escherichia coli ECRC99 1.00 KEDOAH_00965 ppsA phosphoenolpyruvate synthase 1.00 KEDOAH_10045 nusA Transcription termination/antitermination protein NusA — —
Escherichia coli ECRC102 1.00 NIAGMN_00920 ppsA phosphoenolpyruvate synthase 1.00 NIAGMN_15865 nusA Transcription termination/antitermination protein NusA — —
Escherichia coli BL21 1.00 ECD_01671 phosphoenolpyruvate synthase 1.00 ECD_03036 transcription termination/antitermination L factor low > 60
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09510 phosphoenolpyruvate synthase 1.00 ECOLIN_RS18260 transcription termination factor NusA — —
Escherichia fergusonii Becca 1.00 EFB2_02289 Phosphoenolpyruvate synthase 1.00 EFB2_00654 Transcription termination/antitermination protein NusA low > 86
Escherichia coli ECOR38 1.00 HEPCGN_05510 ppsA phosphoenolpyruvate synthase 1.00 HEPCGN_16980 nusA Transcription termination/antitermination protein NusA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF3539 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.95 GFF1497 Transcription termination protein NusA low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_1704 phosphoenolpyruvate synthase (EC 2.7.9.2) 0.95 EX28DRAFT_3220 NusA antitermination factor — —
Enterobacter sp. TBS_079 0.96 MPMX20_01922 Phosphoenolpyruvate synthase 0.95 MPMX20_04074 Transcription termination/antitermination protein NusA — —
Klebsiella michiganensis M5al 0.95 BWI76_RS17065 phosphoenolpyruvate synthase 0.96 BWI76_RS25095 transcription termination protein NusA — —
Pantoea sp. MT58 0.88 IAI47_10905 phosphoenolpyruvate synthase 0.92 IAI47_17030 transcription termination/antitermination protein NusA — —
Erwinia tracheiphila SCR3 0.87 LU632_RS11025 ppsA phosphoenolpyruvate synthase 0.89 LU632_RS21065 nusA transcription termination factor NusA — —
Pectobacterium carotovorum WPP14 0.86 HER17_RS08885 phosphoenolpyruvate synthase 0.87 HER17_RS18215 transcription termination factor NusA — —
Dickeya dianthicola 67-19 0.86 HGI48_RS12875 phosphoenolpyruvate synthase 0.89 HGI48_RS03235 transcription termination/antitermination protein NusA — —
Dickeya dianthicola ME23 0.86 DZA65_RS13340 phosphoenolpyruvate synthase 0.89 DZA65_RS03230 transcription termination/antitermination protein NusA low > 75
Rahnella sp. WP5 0.86 EX31_RS13935 phosphoenolpyruvate synthase 0.89 EX31_RS08545 transcription termination/antitermination protein NusA low > 89
Dickeya dadantii 3937 0.85 DDA3937_RS12805 phosphoenolpyruvate synthase 0.89 DDA3937_RS03065 transcription termination/antitermination protein NusA — —
Serratia liquefaciens MT49 0.85 IAI46_11115 phosphoenolpyruvate synthase 0.89 IAI46_01930 transcription termination/antitermination protein NusA — —
Shewanella amazonensis SB2B 0.77 Sama_2072 phosphoenolpyruvate synthase (RefSeq) 0.75 Sama_0960 nusA transcription elongation factor NusA (RefSeq) — —
Shewanella sp. ANA-3 0.76 Shewana3_1736 phosphoenolpyruvate synthase (RefSeq) 0.74 Shewana3_1029 nusA transcription elongation factor NusA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.76 SO2644 ppsA phosphoenolpyruvate synthase (NCBI ptt file) 0.74 SO1203 nusA N utilization substance protein A (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.76 Shew_1549 phosphoenolpyruvate synthase (RefSeq) 0.75 Shew_2828 nusA transcription elongation factor NusA (RefSeq) — —
Alteromonas macleodii MIT1002 0.75 MIT1002_01816 Phosphoenolpyruvate synthase 0.72 MIT1002_01770 hypothetical protein — —
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_1553 phosphoenolpyruvate synthase (EC 2.7.9.2) 0.66 B158DRAFT_0111 NusA antitermination factor — —
Pseudomonas sp. S08-1 0.71 OH686_01660 phosphoenolpyruvate synthase 0.62 OH686_17140 Transcription termination protein NusA — —
Marinobacter adhaerens HP15 0.70 HP15_2229 phosphoenolpyruvate synthase 0.62 HP15_3068 transcription elongation factor NusA — —
Pseudomonas stutzeri RCH2 0.70 Psest_2316 phosphoenolpyruvate synthase 0.60 Psest_0980 transcription termination factor NusA/transcription termination factor NusA, C-terminal duplication — —
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_19050 phosphoenolpyruvate synthase 0.81 CSW01_03385 transcription termination/antitermination protein NusA — —
Pseudomonas putida KT2440 0.70 PP_2082 phosphoenolpyruvate synthetase 0.61 PP_4713 transcription termination/antitermination L factor — —
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_2090 phosphoenolpyruvate synthase 0.61 Psyr_4181 Transcription termination factor NusA:Transcription termination factor NusA, C-terminal duplication — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_2090 phosphoenolpyruvate synthase 0.61 Psyr_4181 Transcription termination factor NusA:Transcription termination factor NusA, C-terminal duplication low > 86
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_00865 phosphoenolpyruvate synthase 0.61 AO353_05565 transcription elongation factor NusA — —
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_3826 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.61 Pf1N1B4_1162 Transcription termination protein NusA — —
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS22630 phosphoenolpyruvate synthase 0.61 PFLU_RS25815 transcription termination/antitermination protein NusA low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS22630 phosphoenolpyruvate synthase 0.61 PFLU_RS25815 transcription termination/antitermination protein NusA — —
Pseudomonas simiae WCS417 0.69 PS417_21020 phosphoenolpyruvate synthase 0.61 PS417_23975 transcription elongation factor NusA — —
Pseudomonas sp. RS175 0.69 PFR28_01038 Phosphoenolpyruvate synthase 0.60 PFR28_00089 Transcription termination/antitermination protein NusA low > 88
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_4112 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.60 PfGW456L13_5089 Transcription termination protein NusA low > 87
Acinetobacter radioresistens SK82 0.68 MPMX26_01166 Phosphoenolpyruvate synthase 0.49 MPMX26_00253 Transcription termination/antitermination protein NusA — —
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_2389 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.60 Pf6N2E2_3354 Transcription termination protein NusA — —
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_02825 phosphoenolpyruvate synthase 0.60 AO356_07415 transcription elongation factor NusA — —
Rhodanobacter denitrificans MT42 0.66 LRK55_RS16585 phosphoenolpyruvate synthase 0.53 LRK55_RS00825 transcription termination factor NusA — —
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS16870 phosphoenolpyruvate synthase 0.53 LRK54_RS01050 transcription termination factor NusA — —
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.2412.1 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.54 Xcc-8004.2001.1 Transcription termination protein NusA — —
Lysobacter sp. OAE881 0.66 ABIE51_RS09520 phosphoenolpyruvate synthase 0.55 ABIE51_RS08390 transcription termination factor NusA — —
Dechlorosoma suillum PS 0.65 Dsui_2677 phosphoenolpyruvate synthase 0.49 Dsui_2723 transcription termination factor NusA — —
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_07970 ppsA phosphoenolpyruvate synthase 0.53 OKGIIK_05845 nusA transcription termination/antitermination protein NusA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3920 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.48 GFF4342 Transcription termination protein NusA — —
Variovorax sp. SCN45 0.65 GFF2818 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.48 GFF223 Transcription termination protein NusA — —
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS06505 phosphoenolpyruvate synthase 0.46 QEN71_RS23105 transcription termination factor NusA — —
Acidovorax sp. GW101-3H11 0.64 Ac3H11_206 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.48 Ac3H11_2868 Transcription termination protein NusA — —
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS07250 phosphoenolpyruvate synthase 0.52 ABZR86_RS06030 transcription termination factor NusA low > 74
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS11925 phosphoenolpyruvate synthase 0.49 ABZR87_RS11205 transcription termination factor NusA — —
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS12055 phosphoenolpyruvate synthase 0.46 BPHYT_RS08065 transcription termination factor NusA — —
Castellaniella sp019104865 MT123 0.64 ABCV34_RS04025 phosphoenolpyruvate synthase 0.47 ABCV34_RS02120 transcription termination factor NusA — —
Variovorax sp. OAS795 0.64 ABID97_RS10815 phosphoenolpyruvate synthase 0.47 ABID97_RS16490 transcription termination factor NusA — —
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS11790 phosphoenolpyruvate synthase 0.48 RR42_RS12850 transcription termination factor NusA — —
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_00627 phosphoenolpyruvate synthase 0.46 H281DRAFT_05103 NusA antitermination factor — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS00475 phosphoenolpyruvate synthase 0.49 RALBFv3_RS15675 transcription termination/antitermination protein NusA — —
Ralstonia solanacearum PSI07 0.64 RPSI07_RS17015 phosphoenolpyruvate synthase 0.49 RPSI07_RS17680 transcription termination/antitermination protein NusA — —
Paraburkholderia graminis OAS925 0.64 ABIE53_002485 pyruvate,water dikinase 0.47 ABIE53_001829 N utilization substance protein A low > 113
Ralstonia solanacearum GMI1000 0.64 RS_RS07130 phosphoenolpyruvate synthase 0.49 RS_RS06455 transcription termination/antitermination protein NusA — —
Ralstonia solanacearum UW163 0.63 UW163_RS13805 phosphoenolpyruvate synthase 0.49 UW163_RS13135 transcription termination/antitermination protein NusA — —

Not shown: 4 genomes with orthologs for b1702 only; 22 genomes with orthologs for b3169 only