Conservation of cofitness between b0426 and b2277 in Escherichia coli BW25113

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0426 yajQ orf, hypothetical protein (VIMSS) 1.0 b2277 nuoM NADH dehydrogenase subunit M (NCBI) 0.26 18
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03250 hypothetical protein 1.00 OHPLBJKB_01429 NADH-quinone oxidoreductase subunit M low > 73
Escherichia coli ECOR27 1.00 NOLOHH_01340 yajQ nucleotide binding protein YajQ 1.00 NOLOHH_14515 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia fergusonii Becca 1.00 EFB2_03631 hypothetical protein 1.00 EFB2_01582 NADH-quinone oxidoreductase subunit M low > 86
Escherichia coli ECRC99 1.00 KEDOAH_19575 yajQ nucleotide binding protein YajQ 1.00 KEDOAH_05300 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECRC102 1.00 NIAGMN_06445 yajQ nucleotide binding protein YajQ 1.00 NIAGMN_20665 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECOR38 1.00 HEPCGN_07020 yajQ nucleotide binding protein YajQ 1.00 HEPCGN_22100 nuoM NADH-quinone oxidoreductase subunit M low > 85
Escherichia coli BL21 1.00 ECD_00374 phage Phi6 host factor, ATP/GTP binding protein 1.00 ECD_02202 NADH:ubiquinone oxidoreductase, membrane subunit M low > 60
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02565 nucleotide binding protein YajQ 1.00 ECOLIN_RS13230 NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECRC101 1.00 OKFHMN_08390 yajQ nucleotide binding protein YajQ 1.00 OKFHMN_22895 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECRC101 1.00 MCAODC_27615 yajQ nucleotide binding protein YajQ 1.00 MCAODC_13935 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECRC98 1.00 JDDGAC_12045 yajQ nucleotide binding protein YajQ 1.00 JDDGAC_26860 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECRC62 1.00 BNILDI_22755 yajQ nucleotide binding protein YajQ 1.00 BNILDI_13435 nuoM NADH-quinone oxidoreductase subunit M — —
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2545 Uncharacterized protein conserved in bacteria 0.94 EX28DRAFT_0333 proton-translocating NADH-quinone oxidoreductase, chain M low > 76
Klebsiella michiganensis M5al 0.92 BWI76_RS06410 YajQ family cyclic di-GMP-binding protein 0.93 BWI76_RS20135 NADH-quinone oxidoreductase subunit M low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF4337 FIG001943: hypothetical protein YajQ 0.96 GFF1880 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) low > 78
Enterobacter sp. TBS_079 0.91 MPMX20_01017 hypothetical protein 0.94 MPMX20_03207 NADH-quinone oxidoreductase subunit M low > 85
Erwinia tracheiphila SCR3 0.79 LU632_RS18450 YajQ family cyclic di-GMP-binding protein 0.85 LU632_RS08020 nuoM NADH-quinone oxidoreductase subunit M low > 74
Rahnella sp. WP5 0.79 EX31_RS22185 YajQ family cyclic di-GMP-binding protein 0.87 EX31_RS19380 NADH-quinone oxidoreductase subunit M low > 89
Pectobacterium carotovorum WPP14 0.79 HER17_RS15905 YajQ family cyclic di-GMP-binding protein 0.86 HER17_RS07180 NADH-quinone oxidoreductase subunit M low > 75
Serratia liquefaciens MT49 0.78 IAI46_04955 YajQ family cyclic di-GMP-binding protein 0.88 IAI46_17655 NADH-quinone oxidoreductase subunit M low > 86
Pantoea sp. MT58 0.78 IAI47_14710 YajQ family cyclic di-GMP-binding protein 0.87 IAI47_06415 NADH-quinone oxidoreductase subunit M low > 76
Dickeya dianthicola 67-19 0.77 HGI48_RS05620 YajQ family cyclic di-GMP-binding protein 0.83 HGI48_RS14255 NADH-quinone oxidoreductase subunit M — —
Dickeya dianthicola ME23 0.76 DZA65_RS05945 YajQ family cyclic di-GMP-binding protein 0.83 DZA65_RS14930 NADH-quinone oxidoreductase subunit M — —
Dickeya dadantii 3937 0.76 DDA3937_RS05560 YajQ family cyclic di-GMP-binding protein 0.83 DDA3937_RS14280 NADH-quinone oxidoreductase subunit M — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_0029 Uncharacterized protein conserved in bacteria 0.30 B158DRAFT_0115 NADH dehydrogenase subunit M (EC 1.6.5.3) low > 40
Shewanella oneidensis MR-1 0.63 SO3815 conserved hypothetical protein (NCBI ptt file) 0.70 SO1010 nuoM NADH dehydrogenase I, M subunit (NCBI ptt file) 0.28 62
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.4605.1 FIG001943: hypothetical protein YajQ 0.30 Xcc-8004.1995.1 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Lysobacter sp. OAE881 0.48 ABIE51_RS18465 YajQ family cyclic di-GMP-binding protein 0.30 ABIE51_RS08370 NADH-quinone oxidoreductase subunit M — —
Pseudomonas stutzeri RCH2 0.47 Psest_1142 Uncharacterized protein conserved in bacteria 0.12 Psest_4369 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit low > 67
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_17960 nucleotide-binding protein 0.68 AO356_22015 NADH:ubiquinone oxidoreductase subunit M — —
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5522 FIG001943: hypothetical protein YajQ 0.67 Pf6N2E2_266 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_03500 yajQ YajQ family cyclic di-GMP-binding protein 0.29 OKGIIK_05825 nuoM NADH-quinone oxidoreductase subunit M — —
Pseudomonas sp. S08-1 0.46 OH686_08210 UPF0234 protein Yitk 0.71 OH686_00100 NADH-ubiquinone oxidoreductase chain M low > 80
Acinetobacter radioresistens SK82 0.46 MPMX26_02644 hypothetical protein 0.60 MPMX26_02544 NADH-quinone oxidoreductase subunit M — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_1840 FIG001943: hypothetical protein YajQ 0.69 PfGW456L13_2622 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Pseudomonas putida KT2440 0.46 PP_1352 UPF0234 protein PP_1352 0.66 PP_4130 NADH:ubiquinone oxidoreductase, membrane subunit M low > 96
Pseudomonas simiae WCS417 0.46 PS417_22510 nucleotide-binding protein 0.68 PS417_16630 NADH:ubiquinone oxidoreductase subunit M — —
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_03640 nucleotide-binding protein 0.69 AO353_27795 NADH:ubiquinone oxidoreductase subunit M — —
Pseudomonas sp. RS175 0.46 PFR28_03425 hypothetical protein 0.67 PFR28_02638 NADH-quinone oxidoreductase subunit M — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein 0.68 PFLU_RS18670 NADH-quinone oxidoreductase subunit M low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein 0.68 PFLU_RS18670 NADH-quinone oxidoreductase subunit M low > 109
Rhodanobacter denitrificans MT42 0.46 LRK55_RS14390 YajQ family cyclic di-GMP-binding protein 0.29 LRK55_RS00845 NADH-quinone oxidoreductase subunit M — —
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS00410 YajQ family cyclic di-GMP-binding protein 0.29 ABZR86_RS06055 NADH-quinone oxidoreductase subunit M — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS14675 YajQ family cyclic di-GMP-binding protein 0.29 LRK54_RS01070 NADH-quinone oxidoreductase subunit M — —
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_4087 Protein of unknown function DUF520 0.66 Psyr_3208 NADH dehydrogenase subunit M low > 86
Castellaniella sp019104865 MT123 0.45 ABCV34_RS15080 YajQ family cyclic di-GMP-binding protein 0.28 ABCV34_RS08690 NADH-quinone oxidoreductase subunit M — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_4087 Protein of unknown function DUF520 0.66 Psyr_3208 NADH dehydrogenase subunit M — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_650 FIG001943: hypothetical protein YajQ 0.67 Pf1N1B4_4029 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) low > 87
Variovorax sp. SCN45 0.44 GFF3099 UPF0234 protein Yitk 0.28 GFF4762 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Variovorax sp. OAS795 0.44 ABID97_RS21685 YajQ family cyclic di-GMP-binding protein 0.28 ABID97_RS20435 NADH-quinone oxidoreductase subunit M — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF292 FIG001943: hypothetical protein YajQ 0.29 GFF3693 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_2620 FIG001943: hypothetical protein YajQ 0.29 Ac3H11_1440 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS04840 YajQ family cyclic di-GMP-binding protein 0.26 ABZR88_RS15725 NuoM family protein — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS18375 nucleotide-binding protein 0.29 AMB_RS13950 NADH-quinone oxidoreductase subunit M — —
Ralstonia solanacearum GMI1000 0.42 RS_RS12780 nucleotide-binding protein 0.31 RS_RS10285 NADH-quinone oxidoreductase subunit M — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS12140 YajQ family cyclic di-GMP-binding protein 0.31 RPSI07_RS14395 NADH-quinone oxidoreductase subunit M — —
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS07165 nucleotide-binding protein 0.27 HSERO_RS08880 NADH:ubiquinone oxidoreductase subunit M — —
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS00820 YajQ family cyclic di-GMP-binding protein 0.30 ABZR87_RS14820 NADH-quinone oxidoreductase subunit M — —
Ralstonia solanacearum UW163 0.40 UW163_RS08465 YajQ family cyclic di-GMP-binding protein 0.31 UW163_RS10810 NADH-quinone oxidoreductase subunit M — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS05160 YajQ family cyclic di-GMP-binding protein 0.31 RALBFv3_RS02915 NADH-quinone oxidoreductase subunit M — —
Azospirillum brasilense Sp245 0.40 AZOBR_RS21810 nucleotide-binding protein 0.32 AZOBR_RS07225 NADH:ubiquinone oxidoreductase subunit M — —
Azospirillum sp. SherDot2 0.39 MPMX19_04413 hypothetical protein 0.31 MPMX19_01734 NADH-quinone oxidoreductase subunit M — —
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS17155 nucleotide-binding protein 0.30 RR42_RS05570 NADH:ubiquinone oxidoreductase subunit M — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_15545 YajQ family cyclic di-GMP-binding protein 0.48 CA264_04215 NADH-quinone oxidoreductase subunit M low > 74
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_04122 hypothetical protein 0.31 H281DRAFT_04579 NADH dehydrogenase subunit M — —
Mycobacterium tuberculosis H37Rv 0.38 Rv0566c Conserved protein 0.22 Rv3157 Probable NADH dehydrogenase I (chain M) NUOK (NADH-ubiquinone oxidoreductase chain M) low > 58
Dechlorosoma suillum PS 0.38 Dsui_3245 hypothetical protein 0.29 Dsui_3038 proton-translocating NADH-quinone oxidoreductase, chain M — —
Paraburkholderia graminis OAS925 0.38 ABIE53_003357 uncharacterized protein YajQ (UPF0234 family) 0.30 ABIE53_001602 NADH-quinone oxidoreductase subunit M — —
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS15930 nucleotide-binding protein 0.30 BPHYT_RS06685 NADH:ubiquinone oxidoreductase subunit M — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS09840 YajQ family cyclic di-GMP-binding protein 0.26 CA265_RS23595 NADH-quinone oxidoreductase subunit M — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS02775 YajQ family cyclic di-GMP-binding protein 0.31 QEN71_RS24090 NADH-quinone oxidoreductase subunit M — —
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_0865 nucleotide-binding protein 0.29 Synpcc7942_1976 ndhD NAD(P)H-quinone oxidoreductase subunit D low > 38

Not shown: 8 genomes with orthologs for b0426 only; 17 genomes with orthologs for b2277 only