Homologs of UW163_RS07540 from Ralstonia solanacearum UW163

sigma-54-dependent Fis family transcriptional regulator
SEED: Type IV fimbriae expression regulatory protein PilR
KEGG: two-component system, NtrC family, response regulator PilR

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Ralstonia solanacearum UW163 UW163_RS07540 sigma-54-dependent Fis family transcriptional regulator insig. 100 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS06085 sigma-54-dependent Fis family transcriptional regulator strong 99 100
o Ralstonia solanacearum PSI07 RPSI07_RS11155 sigma-54-dependent Fis family transcriptional regulator cofit 96 100
o Ralstonia solanacearum GMI1000 RS_RS14035 sigma-54-dependent Fis family transcriptional regulator strong 94 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS01750 sigma-54 dependent transcriptional regulator strong 84 100
o Cupriavidus basilensis FW507-4G11 RR42_RS17870 Fis family transcriptional regulator insig. 65 96
  Dechlorosoma suillum PS Dsui_0135 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains cofit 62 66
o Lysobacter sp. OAE881 ABIE51_RS04850 sigma-54 dependent transcriptional regulator strong 48 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF595 two component, sigma54 specific, transcriptional regulator, Fis family strong 46 96
o Acidovorax sp. GW101-3H11 Ac3H11_4019 Sigma-54 dependent transcriptional regulator sig. 44 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2818 Type IV fimbriae expression regulatory protein PilR insig. 57 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5122 Type IV fimbriae expression regulatory protein PilR insig. 57 68
  Pseudomonas sp. S08-1 OH686_16390 Type IV fimbriae expression regulatory protein PilR cofit 56 67
  Pseudomonas fluorescens FW300-N2E3 AO353_14200 transcriptional regulator insig. 55 68
  Pseudomonas fluorescens FW300-N2C3 AO356_15905 transcriptional regulator insig. 56 68
  Pseudomonas syringae pv. syringae B728a Psyr_0722 Two-component response regulator PilR insig. 55 68
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0722 Two-component response regulator PilR insig. 55 68
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1353.1 Type IV fimbriae expression regulatory protein PilR sig. 45 93
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11070 sigma-54 dependent transcriptional regulator cofit 55 68
  Pseudomonas stutzeri RCH2 Psest_0705 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 55 69
  Pseudomonas sp. RS175 PFR28_03751 Regulatory protein AtoC insig. 56 68
  Marinobacter adhaerens HP15 HP15_523 two component, sigma54 specific, transcriptional regulator, Fis family strong 53 67
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05020 sigma-54 dependent transcriptional regulator strong 53 67
  Rhodanobacter denitrificans MT42 LRK55_RS04800 sigma-54 dependent transcriptional regulator cofit 53 67
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1489 Type IV fimbriae expression regulatory protein PilR insig. 53 68
  Rhodanobacter sp. FW510-T8 OKGIIK_01730 atoC sigma-54-dependent Fis family transcriptional regulator insig. 53 67
o Variovorax sp. SCN45 GFF4432 Two-component system response regulator protein strong 51 68
  Variovorax sp. OAS795 ABID97_RS06415 sigma-54 dependent transcriptional regulator strong 52 67
  Acinetobacter radioresistens SK82 MPMX26_00162 Regulatory protein AtoC cofit 47 67
  Escherichia coli ECOR27 NOLOHH_05465 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 46 66
  Desulfovibrio vulgaris Miyazaki F DvMF_2109 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 47 66
  Escherichia coli BW25113 b4004 zraR fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) insig. 46 66
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04045 Transcriptional regulatory protein ZraR insig. 46 66
  Escherichia coli ECRC62 BNILDI_06055 zraR sigma-54-dependent response regulator transcription factor ZraR cofit 46 66
  Escherichia coli BL21 ECD_03881 fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein insig. 46 66
  Escherichia fergusonii Becca EFB2_04606 Transcriptional regulatory protein ZraR insig. 46 66
  Escherichia coli Nissle 1917 ECOLIN_RS23090 sigma-54-dependent response regulator transcription factor ZraR insig. 46 66
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4188 Response regulator of zinc sigma-54-dependent two-component system insig. 45 66
  Escherichia coli ECRC101 MCAODC_03820 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 46 66
  Escherichia coli ECRC102 NIAGMN_11070 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 46 66
  Escherichia coli ECRC99 KEDOAH_14840 zraR sigma-54-dependent response regulator transcription factor ZraR no data 46 66
  Escherichia coli ECOR38 HEPCGN_11960 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 46 66
  Escherichia coli ECRC100 OKFHMN_13320 zraR sigma-54-dependent response regulator transcription factor ZraR cofit 46 66
  Escherichia coli ECRC98 JDDGAC_16945 zraR sigma-54-dependent response regulator transcription factor ZraR cofit 46 66
  Klebsiella michiganensis M5al BWI76_RS01605 transcriptional regulatory protein ZraR insig. 45 66
  Alteromonas macleodii MIT1002 MIT1002_01326 Quorum-sensing regulator protein F insig. 41 74
  Variovorax sp. SCN45 GFF3669 Two-component system response regulator protein no data 46 65
  Dechlorosoma suillum PS Dsui_2360 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains cofit 45 65
  Herbaspirillum seropedicae SmR1 HSERO_RS15680 chemotaxis protein CheY strong 42 67
  Burkholderia phytofirmans PsJN BPHYT_RS30045 ATPase AAA insig. 45 68
  Klebsiella michiganensis M5al BWI76_RS21250 two-component system response regulator GlrR sig. 42 66
  Dechlorosoma suillum PS Dsui_3286 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains insig. 44 68
  Acidovorax sp. GW101-3H11 Ac3H11_4011 Putative sensory histidine kinase YfhA sig. 47 65
  Dickeya dianthicola ME23 DZA65_RS16815 two-component system response regulator GlrR insig. 43 65
  Pseudomonas simiae WCS417 PS417_05525 Fis family transcriptional regulator strong 45 68
  Dickeya dianthicola 67-19 HGI48_RS15735 two-component system response regulator GlrR insig. 43 65
  Pseudomonas fluorescens FW300-N2E3 AO353_16225 Fis family transcriptional regulator insig. 44 67
  Rahnella sp. WP5 EX31_RS20615 two-component system response regulator GlrR insig. 44 65
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2455 Putative sensory histidine kinase YfhA strong 43 66
  Pantoea sp. MT58 IAI47_04945 two-component system response regulator GlrR insig. 41 70
  Erwinia tracheiphila SCR3 LU632_RS17930 glrR two-component system response regulator GlrR insig. 43 65
  Pseudomonas fluorescens SBW25 PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 45 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 45 68
  Escherichia coli ECOR38 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC insig. 42 66
  Dickeya dadantii 3937 DDA3937_RS15640 two-component system response regulator GlrR cofit 42 66
  Escherichia coli BL21 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein insig. 42 66
  Escherichia fergusonii Becca EFB2_01635 Regulatory protein AtoC insig. 42 66
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01490 Regulatory protein AtoC insig. 42 66
  Escherichia coli Nissle 1917 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC no data 42 66
  Escherichia coli BW25113 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) insig. 42 66
  Bacteroides ovatus ATCC 8483 BACOVA_03647 Sigma-54 interaction domain protein insig. 38 66
  Desulfovibrio vulgaris Hildenborough JW710 DVU3220 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 44 67
  Desulfovibrio vulgaris Miyazaki F DvMF_0823 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 43 68
  Bacteroides thetaiotaomicron VPI-5482 BT2618 two-component system response regulator (NCBI ptt file) insig. 41 69
  Pseudomonas sp. S08-1 OH686_17260 Two-component sensor CbrB: intrcellular carbon:nitrogen balance strong 41 69
  Ralstonia sp. UNC404CL21Col ABZR87_RS11070 nitrogen regulation protein NR(I) strong 36 95
  Desulfovibrio vulgaris Miyazaki F DvMF_2149 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 44 66
  Azospirillum sp. SherDot2 MPMX19_03494 Regulatory protein AtoC insig. 46 65
  Desulfovibrio vulgaris Hildenborough JW710 DVU0110 ntrC sigma-54 dependent transcriptional regulator/response regulator (TIGR) cofit 44 66
  Pseudomonas stutzeri RCH2 Psest_0999 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 41 67
  Desulfovibrio vulgaris Hildenborough JW710 DVU3305 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) strong 45 67
  Burkholderia phytofirmans PsJN BPHYT_RS12935 chemotaxis protein CheY strong 41 67
  Bacteroides thetaiotaomicron VPI-5482 BT3801 rteB, two-component system response regulator (NCBI ptt file) strong 38 66
  Desulfovibrio vulgaris Miyazaki F DvMF_1993 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) sig. 44 66
  Serratia liquefaciens MT49 IAI46_19460 two-component system response regulator GlrR insig. 42 66
  Enterobacter sp. TBS_079 MPMX20_03423 Transcriptional regulatory protein QseF sig. 42 65
  Paraburkholderia graminis OAS925 ABIE53_002804 two-component system nitrogen regulation response regulator GlnG strong 40 67
  Desulfovibrio vulgaris Miyazaki F DvMF_2200 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) no data 43 67
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15540 nitrogen regulation protein NR(I) no data 36 95
  Ralstonia solanacearum UW163 UW163_RS13000 nitrogen regulation protein NR(I) no data 36 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF610 Putative sensory histidine kinase YfhA insig. 44 66
  Marinobacter adhaerens HP15 HP15_328 two component, sigma54 specific, transcriptional regulator, Fis family strong 41 67
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01779 DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains insig. 44 68
  Pseudomonas putida KT2440 PP_4696 Nitrogen regulation protein NR(I) strong 41 69
  Shewanella loihica PV-4 Shew_2341 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) insig. 45 67
  Escherichia fergusonii Becca EFB2_01342 Transcriptional regulatory protein QseF insig. 42 65
  Escherichia coli ECOR27 NOLOHH_13170 qseF two-component system response regulator QseF/GlrR cofit 42 65
  Escherichia coli ECRC62 BNILDI_11970 qseF two-component system response regulator QseF/GlrR strong 42 65
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01153 Transcriptional regulatory protein GlrR insig. 42 65
  Pectobacterium carotovorum WPP14 HER17_RS05925 two-component system response regulator GlrR cofit 41 65