Homologs of Rv2464c from Mycobacterium tuberculosis H37Rv

Possible DNA glycosylase
SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
KEGG: endonuclease VIII

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Mycobacterium tuberculosis H37Rv Rv2464c Possible DNA glycosylase insig. 100 100
  Mycobacterium tuberculosis H37Rv Rv3297 Probable endonuclease VIII Nei insig. 32 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4632 Endonuclease VIII insig. 27 100
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 30 81
  Rhodanobacter denitrificans MT42 LRK55_RS10505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 35 56
  Rhodanobacter sp. FW510-T8 OKGIIK_13060 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 34 56
  Vibrio cholerae E7946 ATCC 55056 CSW01_01175 formamidopyrimidine-DNA glycosylase insig. 31 56
o Klebsiella michiganensis M5al BWI76_RS08380 endonuclease VIII insig. 27 100
  Rahnella sp. WP5 EX31_RS14455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 32 57
  Serratia liquefaciens MT49 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 29 86
  Escherichia fergusonii Becca EFB2_03389 Endonuclease 8 insig. 26 100
  Escherichia coli Nissle 1917 ECOLIN_RS03820 endonuclease VIII no data 26 100
  Alteromonas macleodii MIT1002 MIT1002_00057 Formamidopyrimidine-DNA glycosylase insig. 30 57
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 32 56
o Escherichia coli BL21 ECD_00674 endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase insig. 26 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03003 Endonuclease 8 insig. 26 100
  Pectobacterium carotovorum WPP14 HER17_RS20815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 29 81
o Escherichia coli BW25113 b0714 nei endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) insig. 26 100
  Serratia liquefaciens MT49 IAI46_06245 endonuclease VIII insig. 28 81
o Escherichia coli ECOR38 HEPCGN_01220 nei endonuclease VIII insig. 26 100
  Erwinia tracheiphila SCR3 LU632_RS21975 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 34 55
o Escherichia coli ECOR27 NOLOHH_23375 nei endonuclease VIII insig. 26 100
o Escherichia coli ECRC62 BNILDI_21370 nei endonuclease VIII cofit 26 100
  Pantoea sp. MT58 IAI47_00635 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 32 55
  Kangiella aquimarina DSM 16071 B158DRAFT_0778 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) cofit 28 91
  Dickeya dadantii 3937 DDA3937_RS20500 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 29 84
  Rahnella sp. WP5 EX31_RS23405 endonuclease VIII insig. 27 86
  Dickeya dianthicola 67-19 HGI48_RS00715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 31 57
  Dickeya dianthicola ME23 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase sig. 31 57
  Herbaspirillum seropedicae SmR1 HSERO_RS19545 formamidopyrimidine-DNA glycosylase insig. 28 86
  Enterobacter sp. TBS_079 MPMX20_01348 Endonuclease 8 insig. 26 100
  Pantoea sp. MT58 IAI47_13775 endonuclease VIII insig. 26 100
  Marinobacter adhaerens HP15 HP15_3493 formamidopyrimidine-DNA glycosylase insig. 26 88
  Pectobacterium carotovorum WPP14 HER17_RS14965 endonuclease VIII insig. 27 86
  Escherichia coli ECRC100 OKFHMN_06990 nei endonuclease VIII cofit 25 100
  Escherichia coli ECRC102 NIAGMN_05045 nei endonuclease VIII insig. 25 100
  Escherichia coli ECRC99 KEDOAH_20975 nei endonuclease VIII no data 25 100
  Escherichia coli ECRC98 JDDGAC_10645 nei endonuclease VIII insig. 25 100
  Marinobacter adhaerens HP15 HP15_4107 endonuclease 8 cofit 27 86
  Enterobacter asburiae PDN3 EX28DRAFT_2273 Formamidopyrimidine-DNA glycosylase insig. 26 100
  Enterobacter sp. TBS_079 MPMX20_00100 Formamidopyrimidine-DNA glycosylase insig. 28 88
  Dechlorosoma suillum PS Dsui_1031 formamidopyrimidine-DNA glycosylase Fpg insig. 34 91
  Pseudomonas fluorescens FW300-N2E3 AO353_08320 5-hydroxymethyluracil DNA glycosylase insig. 31 55
  Rhodospirillum rubrum S1H Rru_A3799 DNA-formamidopyrimidine glycosylase (NCBI) insig. 30 86
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF374 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 32 55
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 29 86
  Escherichia fergusonii Becca EFB2_00178 Formamidopyrimidine-DNA glycosylase insig. 32 55
  Escherichia coli ECOR38 HEPCGN_14460 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 32 55
  Escherichia coli ECRC100 OKFHMN_15635 Formamidopyrimidine-DNA glycosylase cofit 32 55
  Escherichia coli ECRC101 MCAODC_06145 Formamidopyrimidine-DNA glycosylase insig. 32 55
  Escherichia coli ECRC102 NIAGMN_13395 Formamidopyrimidine-DNA glycosylase insig. 32 55
  Escherichia coli ECRC98 JDDGAC_19260 Formamidopyrimidine-DNA glycosylase cofit 32 55
  Escherichia coli ECRC99 KEDOAH_12515 Formamidopyrimidine-DNA glycosylase no data 32 55
  Pseudomonas simiae WCS417 PS417_26870 5-hydroxymethyluracil DNA glycosylase insig. 30 55
  Escherichia coli Nissle 1917 ECOLIN_RS20715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 32 55
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5281.1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 30 57
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4569 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 32 55
  Synechococcus elongatus PCC 7942 Synpcc7942_1323 fpg DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 27 85
  Pseudomonas stutzeri RCH2 Psest_0239 formamidopyrimidine-DNA glycosylase (fpg) insig. 31 54
  Pseudomonas fluorescens SBW25 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 30 55
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 30 55
  Pseudomonas fluorescens FW300-N2C3 AO356_13270 5-hydroxymethyluracil DNA glycosylase insig. 32 55
  Escherichia coli BL21 ECD_03492 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase insig. 31 55
  Escherichia coli ECRC62 BNILDI_04000 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 31 55
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00067 Formamidopyrimidine-DNA glycosylase cofit 31 55
  Escherichia coli BW25113 b3635 mutM formamidopyrimidine-DNA glycosylase (NCBI) insig. 31 55
  Escherichia coli ECOR27 NOLOHH_07515 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 31 55
  Pseudomonas putida KT2440 PP_5125 Formamidopyrimidine-DNA glycosylase insig. 30 55
  Pseudomonas syringae pv. syringae B728a Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 29 55
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 29 55
  Pseudomonas sp. RS175 PFR28_04272 Formamidopyrimidine-DNA glycosylase insig. 32 55
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2309 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 29 55
  Pseudomonas sp. S08-1 OH686_14125 DNA-formamidopyrimidine glycosylase cofit 31 55
  Shewanella loihica PV-4 Shew_3690 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 28 54
  Pseudomonas fluorescens GW456-L13 PfGW456L13_979 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 30 55
  Burkholderia phytofirmans PsJN BPHYT_RS02870 formamidopyrimidine-DNA glycosylase insig. 27 91
  Desulfovibrio vulgaris Miyazaki F DvMF_2449 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 33 62
  Enterobacter asburiae PDN3 EX28DRAFT_3885 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 28 88
  Dickeya dadantii 3937 DDA3937_RS06430 endonuclease VIII insig. 26 86
  Paraburkholderia graminis OAS925 ABIE53_000711 formamidopyrimidine-DNA glycosylase insig. 27 91
  Rhodopseudomonas palustris CGA009 TX73_000435 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 26 87
  Klebsiella michiganensis M5al BWI76_RS27330 DNA-formamidopyrimidine glycosylase insig. 30 54
  Shewanella amazonensis SB2B Sama_0117 formamidopyrimidine-DNA glycosylase (RefSeq) sig. 26 55
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01934 DNA-(apurinic or apyrimidinic site) lyase insig. 27 91
  Shewanella oneidensis MR-1 SO4726 mutM formamidopyrimidine-DNA glycosylase (NCBI ptt file) insig. 27 56
  Phaeobacter inhibens DSM 17395 PGA1_c36490 formamidopyrimidine-DNA glycosylase MutM insig. 27 87
  Desulfovibrio vulgaris Hildenborough JW710 DVU3256 mutM formamidopyrimidine-DNA glycosylase (TIGR) insig. 35 53
  Lysobacter sp. OAE881 ABIE51_RS00335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 29 56
  Ralstonia sp. UNC404CL21Col ABZR87_RS07015 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase cofit 28 75
  Dinoroseobacter shibae DFL-12 Dshi_3369 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 25 88
  Alteromonas macleodii MIT1002 MIT1002_02957 DNA glycosylase/AP lyase Nei insig. 24 85
  Caulobacter crescentus NA1000 CCNA_03822 formamidopyrimidine-DNA glycosylase insig. 26 85
  Caulobacter crescentus NA1000 Δfur CCNA_03822 formamidopyrimidine-DNA glycosylase cofit 26 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS01720 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 26 87
  Magnetospirillum magneticum AMB-1 AMB_RS03255 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 30 86
  Agrobacterium fabrum C58 Atu0321 formamidopyrimidine-DNA glycosylase insig. 26 90
  Shewanella sp. ANA-3 Shewana3_4084 formamidopyrimidine-DNA glycosylase (RefSeq) cofit 27 56
  Ralstonia solanacearum GMI1000 RS_RS01975 formamidopyrimidine-DNA glycosylase insig. 27 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 27 85
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11125 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 27 85