Homologs of Rv1512 from Mycobacterium tuberculosis H37Rv

Probable nucleotide-sugar epimerase EpiA
SEED: GDP-L-fucose synthetase (EC 1.1.1.271)
KEGG: GDP-L-fucose synthase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Mycobacterium tuberculosis H37Rv Rv1512 Probable nucleotide-sugar epimerase EpiA insig. 100 100
o Desulfovibrio vulgaris Hildenborough JW710 DVU0090 wcaG GDP-fucose synthetase (TIGR) no data 61 96
o Synechococcus elongatus PCC 7942 Synpcc7942_1700 wcaG GDP-fucose synthetase NAD dependent epimerase/dehydratase no data 57 95
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05195 GDP-fucose synthetase strong 55 94
o Paraburkholderia sabiae LMG 24235 QEN71_RS26355 GDP-L-fucose synthase insig. 58 96
o Azospirillum brasilense Sp245 AZOBR_RS03370 GDP-L-fucose synthase insig. 56 95
o Azospirillum sp. SherDot2 MPMX19_05629 GDP-L-fucose synthase insig. 56 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17480 GDP-L-fucose synthase no data 56 92
o Desulfovibrio vulgaris Miyazaki F DvMF_2695 NAD-dependent epimerase/dehydratase (RefSeq) strong 55 97
o Burkholderia phytofirmans PsJN BPHYT_RS04005 GDP-L-fucose synthase strong 55 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04777 GDP-L-fucose synthase insig. 55 95
o Caulobacter crescentus NA1000 CCNA_00471 GDP-L-fucose synthase strong 56 95
o Caulobacter crescentus NA1000 Δfur CCNA_00471 GDP-L-fucose synthase cofit 56 95
o Dechlorosoma suillum PS Dsui_0086 nucleoside-diphosphate-sugar epimerase strong 55 91
o Paraburkholderia graminis OAS925 ABIE53_000941 GDP-L-fucose synthase sig. 55 95
o Escherichia coli ECRC101 OKFHMN_24445 wcaG GDP-fucose synthetase insig. 52 95
o Escherichia coli ECRC101 MCAODC_20495 wcaG GDP-fucose synthetase no data 52 95
o Escherichia coli ECRC102 NIAGMN_22390 wcaG GDP-fucose synthetase no data 52 95
o Escherichia coli ECRC98 JDDGAC_28555 wcaG GDP-fucose synthetase no data 52 95
o Escherichia coli ECRC99 KEDOAH_03705 wcaG GDP-fucose synthetase no data 52 95
o Castellaniella sp019104865 MT123 ABCV34_RS12930 GDP-L-fucose synthase no data 54 93
o Escherichia coli BL21 ECD_01958 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase insig. 53 95
o Escherichia coli ECRC62 BNILDI_14590 fcl GDP-L-fucose synthase insig. 53 95
o Escherichia coli BW25113 b2052 fcl bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase (NCBI) sig. 53 95
o Escherichia coli ECOR38 HEPCGN_03050 fcl GDP-L-fucose synthase cofit 53 95
o Escherichia fergusonii Becca EFB2_01802 GDP-L-fucose synthase insig. 53 95
o Escherichia coli ECOR27 NOLOHH_15680 fcl GDP-L-fucose synthase cofit 53 95
  Escherichia coli ECRC101 OKFHMN_24350 fcl GDP-L-fucose synthase insig. 53 95
  Escherichia coli ECRC101 MCAODC_20590 fcl GDP-L-fucose synthase insig. 53 95
  Escherichia coli ECRC102 NIAGMN_22295 fcl GDP-L-fucose synthase insig. 53 95
  Escherichia coli ECRC98 JDDGAC_28460 fcl GDP-L-fucose synthase no data 53 95
  Escherichia coli ECRC99 KEDOAH_03800 fcl GDP-L-fucose synthase no data 53 95
o Escherichia coli Nissle 1917 ECOLIN_RS12090 GDP-L-fucose synthase no data 53 95
o Enterobacter sp. TBS_079 MPMX20_03034 GDP-L-fucose synthase sig. 51 95
o Enterobacter asburiae PDN3 EX28DRAFT_0503 Nucleoside-diphosphate-sugar epimerases insig. 51 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1841 GDP-L-fucose synthetase (EC 1.1.1.271) strong 54 91
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS03850 GDP-L-fucose synthase insig. 52 92
o Magnetospirillum magneticum AMB-1 AMB_RS00820 GDP-L-fucose synthase cofit 55 94
o Dinoroseobacter shibae DFL-12 Dshi_4142 NAD-dependent epimerase/dehydratase (RefSeq) strong 52 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19205 GDP-fucose synthetase insig. 52 92
o Rhodanobacter denitrificans MT42 LRK55_RS03655 GDP-L-fucose synthase strong 54 91
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19675 GDP-fucose synthetase insig. 51 92
o Cupriavidus basilensis FW507-4G11 RR42_RS34460 GDP-L-fucose synthase sig. 56 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3876 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 52 95
o Pectobacterium carotovorum WPP14 HER17_RS14535 GDP-L-fucose synthase cofit 51 96
o Phaeobacter inhibens DSM 17395 PGA1_65p00300 GDP-L-fucose synthetase Fcl no data 55 94
  Cupriavidus basilensis FW507-4G11 RR42_RS33240 GDP-L-fucose synthase strong 53 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF53 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 52 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2555 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 50 94
o Rhodospirillum rubrum S1H Rru_A0254 NAD-dependent epimerase/dehydratase (NCBI) insig. 53 96
  Azospirillum sp. SherDot2 MPMX19_06634 GDP-L-fucose synthase cofit 53 93
o Pseudomonas fluorescens SBW25 PFLU_RS17885 GDP-L-fucose synthase insig. 51 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17885 GDP-L-fucose synthase sig. 51 92
  Azospirillum sp. SherDot2 MPMX19_06659 GDP-L-fucose synthase insig. 52 94
o Agrobacterium fabrum C58 Atu4790 GDP-fucose synthetase insig. 52 93
o Pseudomonas stutzeri RCH2 Psest_1819 Nucleoside-diphosphate-sugar epimerases strong 49 94
o Variovorax sp. OAS795 ABID97_RS19130 GDP-L-fucose synthase insig. 51 93
  Cupriavidus basilensis FW507-4G11 RR42_RS21005 GDP-L-fucose synthase insig. 51 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00180 GDP-L-fucose synthase strong 43 95
o Phocaeicola dorei CL03T12C01 ABI39_RS13275 GDP-L-fucose synthase insig. 43 95
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17275 GDP-L-fucose synthase sig. 42 95
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06610 GDP-L-fucose synthase strong 42 94
  Magnetospirillum magneticum AMB-1 AMB_RS04085 GDP-L-fucose synthase cofit 48 93
  Phocaeicola dorei CL03T12C01 ABI39_RS20405 GDP-L-fucose synthase strong 42 94
o Bacteroides ovatus ATCC 8483 BACOVA_00512 NAD dependent epimerase/dehydratase family protein no data 42 94
o Variovorax sp. SCN45 GFF60 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 50 90
o Bacteroides stercoris CC31F HMPREF1181_RS12535 GDP-L-fucose synthase strong 42 94
o Bacteroides thetaiotaomicron VPI-5482 BT1225 GDP-fucose synthetase (NCBI ptt file) no data 42 94
o Herbaspirillum seropedicae SmR1 HSERO_RS22065 EpiA sig. 47 95
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4397 Nucleoside-diphosphate-sugar epimerases strong 38 94
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13020 NAD-dependent epimerase/dehydratase family protein strong 34 95
o Dickeya dianthicola 67-19 HGI48_RS18610 GDP-L-fucose synthase cofit 25 97
o Dickeya dianthicola ME23 DZA65_RS19745 GDP-L-fucose synthase strong 25 97
o Dickeya dadantii 3937 DDA3937_RS18680 GDP-L-fucose synthase strong 25 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2369 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 35 71
  Desulfovibrio vulgaris Miyazaki F DvMF_2922 NAD-dependent epimerase/dehydratase (RefSeq) no data 33 70
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2372 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 26 96
o Rhizobium sp. OAE497 ABIE40_RS02610 NAD-dependent epimerase/dehydratase family protein insig. 25 90
  Azospirillum brasilense Sp245 AZOBR_RS03375 NAD-dependent dehydratase insig. 28 92
  Rhodanobacter denitrificans MT42 LRK55_RS09735 SDR family oxidoreductase insig. 29 67
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10095 SDR family oxidoreductase insig. 29 67
  Paraburkholderia graminis OAS925 ABIE53_001158 UDP-glucose 4-epimerase strong 26 71
  Acidovorax sp. GW101-3H11 Ac3H11_1880 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) no data 29 84
  Desulfovibrio vulgaris Hildenborough JW710 DVU1364 rfbB dTDP-glucose 4,6-dehydratase (TIGR) no data 27 72
  Mycobacterium tuberculosis H37Rv Rv3634c UDP-glucose 4-epimerase GalE1 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase) no data 29 93
  Rhodanobacter sp. FW510-T8 OKGIIK_13820 wcaG NAD-dependent dehydratase insig. 30 48
  Marinobacter adhaerens HP15 HP15_2387 dTDP-glucose 4-6-dehydratase no data 29 67
  Rhodopseudomonas palustris CGA009 TX73_020625 NAD-dependent epimerase strong 26 83
  Lysobacter sp. OAE881 ABIE51_RS07420 UDP-glucuronic acid decarboxylase family protein insig. 27 93
  Rhodanobacter sp. FW510-T8 OKGIIK_10115 Capsular biosynthesis protein CpsI no data 27 83
  Ralstonia sp. UNC404CL21Col ABZR87_RS23025 UDP-glucuronic acid decarboxylase family protein insig. 28 68
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09700 NAD-dependent epimerase insig. 26 83
  Marinobacter adhaerens HP15 HP15_2048 UDP-glucose 4-epimerase strong 27 93
  Rhodanobacter denitrificans MT42 LRK55_RS02985 NAD-dependent epimerase no data 25 83
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS03235 NAD-dependent epimerase no data 25 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS25630 NAD-dependent epimerase/dehydratase family protein strong 26 70
  Azospirillum sp. SherDot2 MPMX19_05628 dTDP-4-oxo-6-deoxy-D-allose reductase insig. 28 72
  Desulfovibrio vulgaris Miyazaki F DvMF_0137 UDP-glucose 4-epimerase (RefSeq) strong 28 94
  Acidovorax sp. GW101-3H11 Ac3H11_1900 UDP-glucose 4-epimerase (EC 5.1.3.2) no data 30 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS29120 SDR family oxidoreductase cofit 30 48