Homologs of RR42_RS17655 from Cupriavidus basilensis FW507-4G11

ribonuclease II
SEED: Exoribonuclease II (EC 3.1.13.1)
KEGG: exoribonuclease II

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS17655 ribonuclease II no data 100 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS01615 RNB domain-containing ribonuclease sig. 78 88
o Ralstonia solanacearum GMI1000 RS_RS13900 RNB domain-containing ribonuclease no data 78 88
o Ralstonia solanacearum PSI07 RPSI07_RS11290 RNB domain-containing ribonuclease no data 77 88
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05955 RNB domain-containing ribonuclease no data 78 88
o Ralstonia solanacearum UW163 UW163_RS07670 RNB domain-containing ribonuclease no data 78 88
o Burkholderia phytofirmans PsJN BPHYT_RS16980 ribonuclease II no data 57 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS27135 RNB domain-containing ribonuclease no data 60 88
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06290 exoribonuclease-2 no data 60 88
o Paraburkholderia graminis OAS925 ABIE53_003561 exoribonuclease-2 insig. 59 88
o Herbaspirillum seropedicae SmR1 HSERO_RS01980 ribonuclease II no data 58 88
o Dechlorosoma suillum PS Dsui_0446 exoribonuclease R no data 50 88
o Castellaniella sp019104865 MT123 ABCV34_RS10695 RNB domain-containing ribonuclease no data 47 88
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF577 Exoribonuclease II (EC 3.1.13.1) no data 48 88
o Acidovorax sp. GW101-3H11 Ac3H11_4042 Exoribonuclease II (EC 3.1.13.1) no data 46 90
o Variovorax sp. SCN45 GFF4454 Exoribonuclease II (EC 3.1.13.1) strong 47 88
o Methylophilus sp. DMC18 GFF620 Exoribonuclease 2 cofit 45 91
  Desulfovibrio vulgaris Hildenborough JW710 DVU3207 RNB-like family protein (TIGR) strong 29 52
  Synechococcus elongatus PCC 7942 Synpcc7942_1124 rnb Exoribonuclease II strong 27 67
  Desulfovibrio vulgaris Miyazaki F DvMF_1943 ribonuclease II (RefSeq) no data 28 49
  Serratia liquefaciens MT49 IAI46_13870 exoribonuclease II cofit 29 41
  Pantoea sp. MT58 IAI47_09320 exoribonuclease II sig. 28 41
  Dickeya dadantii 3937 DDA3937_RS12490 exoribonuclease II strong 28 40
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06855 exoribonuclease II cofit 27 41
  Dickeya dianthicola 67-19 HGI48_RS12545 exoribonuclease II cofit 28 40
  Escherichia fergusonii Becca EFB2_02638 Exoribonuclease 2 sig. 27 40
  Dickeya dianthicola ME23 DZA65_RS12995 exoribonuclease II sig. 28 40
  Escherichia coli Nissle 1917 ECOLIN_RS07765 exoribonuclease II no data 27 40
  Pectobacterium carotovorum WPP14 HER17_RS09430 exoribonuclease II strong 28 43
  Escherichia coli ECRC100 OKFHMN_02520 rnb exoribonuclease II cofit 27 40
  Escherichia coli ECRC101 MCAODC_15750 rnb exoribonuclease II strong 27 40
  Escherichia coli ECRC102 NIAGMN_26690 rnb exoribonuclease II sig. 27 40
  Escherichia coli ECRC98 JDDGAC_05065 rnb exoribonuclease II sig. 27 40
  Escherichia coli ECRC99 KEDOAH_26245 rnb exoribonuclease II no data 27 40
  Escherichia coli ECOR27 NOLOHH_20185 rnb exoribonuclease II insig. 27 40
  Escherichia coli ECOR38 HEPCGN_25680 rnb exoribonuclease II strong 27 40
  Escherichia coli ECRC62 BNILDI_18335 rnb exoribonuclease II cofit 27 40
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02395 Exoribonuclease 2 sig. 27 40
  Escherichia coli BW25113 b1286 rnb exoribonuclease II (NCBI) strong 27 40
  Synechocystis sp000284455 PCC 6803 SGL_RS05100 ribonuclease R no data 28 45
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2698 Exoribonuclease II (EC 3.1.13.1) strong 27 40
  Erwinia amylovora T8 OLJFJH_13600 exoribonuclease II cofit 26 41
  Escherichia coli BL21 ECD_01263 ribonuclease II cofit 27 40
  Marinobacter adhaerens HP15 HP15_622 exoribonuclease R strong 25 43
  Enterobacter sp. TBS_079 MPMX20_02487 Exoribonuclease 2 strong 26 39
  Vibrio cholerae E7946 ATCC 55056 CSW01_18190 exoribonuclease 2 insig. 26 39
  Enterobacter asburiae PDN3 EX28DRAFT_0961 exoribonuclease II cofit 26 39
  Klebsiella pneumoniae MKP103 KDGMDA_19680 exoribonuclease II strong 25 40
  Klebsiella michiganensis M5al BWI76_RS11990 exoribonuclease II sig. 25 39
  Rahnella sp. WP5 EX31_RS07155 exoribonuclease II insig. 27 39
  Marinobacter adhaerens HP15 HP15_3552 exoribonuclease R strong 23 54
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_23355 exoribonuclease II no data 26 40
  Erwinia tracheiphila SCR3 LU632_RS12255 exoribonuclease II no data 26 40
  Acinetobacter radioresistens SK82 MPMX26_02684 Ribonuclease R cofit 24 43
  Klebsiella pneumoniae MKP103 KDGMDA_11075 ribonuclease R cofit 24 39
  Pantoea sp. MT58 IAI47_02625 ribonuclease R sig. 24 43
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_13230 rnr ribonuclease R strong 25 34
  Erwinia tracheiphila SCR3 LU632_RS21750 rnr ribonuclease R strong 25 34
  Rhodospirillum rubrum S1H Rru_A3203 ribonuclease R (NCBI) cofit 24 39
  Escherichia coli BL21 ECD_04046 exoribonuclease R, RNase R insig. 27 34
  Escherichia coli BW25113 b4179 vacB putative enzyme (VIMSS) strong 27 34
  Escherichia coli ECOR38 HEPCGN_10450 rnr ribonuclease R cofit 26 34
  Escherichia coli ECOR27 NOLOHH_04485 rnr ribonuclease R insig. 26 34
  Escherichia coli ECRC100 OKFHMN_12220 rnr ribonuclease R cofit 26 34
  Escherichia coli ECRC62 BNILDI_07005 rnr ribonuclease R cofit 26 34
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03863 Ribonuclease R cofit 26 34
  Klebsiella michiganensis M5al BWI76_RS02575 exoribonuclease R sig. 25 34
  Agrobacterium fabrum C58 Atu1303 exoribonuclease strong 25 49
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11220 ribonuclease R cofit 22 45
  Escherichia fergusonii Becca EFB2_04356 Ribonuclease R insig. 26 34
  Escherichia coli ECRC101 MCAODC_02735 rnr ribonuclease R sig. 27 34
  Escherichia coli ECRC102 NIAGMN_10070 rnr ribonuclease R cofit 27 34
  Escherichia coli ECRC98 JDDGAC_15860 rnr ribonuclease R cofit 27 34
  Escherichia coli ECRC99 KEDOAH_15935 rnr ribonuclease R no data 27 34
  Escherichia coli Nissle 1917 ECOLIN_RS24265 ribonuclease R sig. 26 34
  Erwinia amylovora T8 OLJFJH_02470 ribonuclease R strong 25 35
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17355 ribonuclease R strong 32 17
  Bacteroides thetaiotaomicron VPI-5482 BT3077 ribonuclease R (NCBI ptt file) insig. 28 30
  Azospirillum brasilense Sp245 AZOBR_RS16165 ribonuclease R insig. 22 51
  Caulobacter crescentus NA1000 CCNA_02537 ribonuclease R strong 25 48
  Caulobacter crescentus NA1000 Δfur CCNA_02537 ribonuclease R cofit 25 48
  Phocaeicola dorei CL03T12C01 ABI39_RS06100 ribonuclease R sig. 25 34
  Enterobacter sp. TBS_079 MPMX20_00460 Ribonuclease R sig. 25 34
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 strong 25 34
  Rhizobium sp. OAE497 ABIE40_RS07350 ribonuclease R insig. 23 52
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05885 ribonuclease R strong 25 31
  Pectobacterium carotovorum WPP14 HER17_RS03835 ribonuclease R cofit 25 34
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10970 ribonuclease R strong 25 34
  Enterobacter asburiae PDN3 EX28DRAFT_3376 ribonuclease R strong 25 34
  Bacteroides ovatus ATCC 8483 BACOVA_02736 ribonuclease R strong 26 38
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10530 ribonuclease R strong 35 12
  Variovorax sp. OAS795 ABID97_RS17200 ribonuclease R strong 23 46
  Pseudomonas aeruginosa PA14 IKLFDK_28865 ribonuclease R strong 22 41
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04270 ribonuclease R strong 40 9
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08325 ribonuclease R cofit 24 47
  Acinetobacter baumannii LAC-4 RR41_RS02345 ribonuclease R strong 22 42
  Variovorax sp. SCN45 GFF399 3'-to-5' exoribonuclease RNase R cofit 22 46
  Rahnella sp. WP5 EX31_RS08785 ribonuclease R insig. 24 34
  Shewanella loihica PV-4 Shew_3289 ribonuclease R (RefSeq) strong 22 67
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0669 ribonuclease R no data 35 10