Homologs of QEN71_RS24905 from Paraburkholderia sabiae LMG 24235

GIY-YIG nuclease family protein
SEED: Ribonuclease E (EC 3.1.26.12)
KEGG: putative endonuclease

70 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Paraburkholderia sabiae LMG 24235 QEN71_RS24905 GIY-YIG nuclease family protein insig. 100 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00216 putative endonuclease no data 75 98
  Paraburkholderia graminis OAS925 ABIE53_001343 putative endonuclease sig. 84 83
o Burkholderia phytofirmans PsJN BPHYT_RS05470 excinuclease ABC subunit C insig. 76 88
  Lysobacter sp. OAE881 ABIE51_RS14940 GIY-YIG nuclease family protein insig. 63 76
  Dechlorosoma suillum PS Dsui_2028 putative endonuclease containing a URI domain no data 67 66
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00190 GIY-YIG nuclease family protein insig. 62 70
  Desulfovibrio vulgaris Miyazaki F DvMF_2126 Excinuclease ABC C subunit domain protein (RefSeq) insig. 50 70
  Escherichia coli BW25113 b3155 yhbQ hypothetical protein (NCBI) insig. 54 74
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00545 hypothetical protein insig. 54 74
  Escherichia fergusonii Becca EFB2_00668 hypothetical protein insig. 54 74
  Escherichia coli Nissle 1917 ECOLIN_RS18125 DNA damage response exodeoxyribonuclease YhbQ insig. 54 74
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1380.1 COG2827: putative endonuclease containing a URI domain insig. 48 81
  Escherichia coli BL21 ECD_03022 GIY-YIG nuclease superfamily protein insig. 54 74
  Escherichia coli ECOR38 HEPCGN_17065 yhbQ DNA damage response exodeoxyribonuclease YhbQ cofit 54 74
  Escherichia coli ECRC101 OKFHMN_18190 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 54 74
  Escherichia coli ECRC101 MCAODC_08710 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 54 74
  Escherichia coli ECRC102 NIAGMN_15950 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 54 74
  Escherichia coli ECRC62 BNILDI_01540 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 54 74
  Escherichia coli ECRC98 JDDGAC_21815 yhbQ DNA damage response exodeoxyribonuclease YhbQ no data 54 74
  Escherichia coli ECRC99 KEDOAH_09960 yhbQ DNA damage response exodeoxyribonuclease YhbQ no data 54 74
  Variovorax sp. OAS795 ABID97_RS06665 GIY-YIG nuclease family protein insig. 53 70
  Escherichia coli ECOR27 NOLOHH_09990 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 53 74
  Cupriavidus basilensis FW507-4G11 RR42_RS36170 hypothetical protein insig. 58 70
o Klebsiella michiganensis M5al BWI76_RS24955 hypothetical protein insig. 46 85
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1513 FIG137864: putative endonuclease containing a URI domain insig. 43 87
  Enterobacter sp. TBS_079 MPMX20_04059 hypothetical protein insig. 45 81
  Enterobacter asburiae PDN3 EX28DRAFT_3204 Predicted endonuclease containing a URI domain insig. 44 83
o Vibrio cholerae E7946 ATCC 55056 CSW01_17870 GIY-YIG nuclease family protein insig. 39 82
  Rhodanobacter denitrificans MT42 LRK55_RS11850 GIY-YIG nuclease family protein insig. 55 64
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12115 GIY-YIG nuclease family protein insig. 55 64
  Rhodanobacter sp. FW510-T8 OKGIIK_11815 GIY-YIG domain-containing protein insig. 51 69
  Desulfovibrio vulgaris Hildenborough JW710 DVU3309 endo/excinuclease amino terminal domain protein (TIGR) sig. 43 69
o Kangiella aquimarina DSM 16071 B158DRAFT_1379 Predicted endonuclease containing a URI domain insig. 38 85
  Dickeya dianthicola ME23 DZA65_RS03300 GIY-YIG nuclease family protein insig. 49 71
  Dickeya dadantii 3937 DDA3937_RS03130 GIY-YIG nuclease family protein insig. 45 86
  Dickeya dianthicola 67-19 HGI48_RS03305 GIY-YIG nuclease family protein insig. 48 71
o Serratia liquefaciens MT49 IAI46_02030 GIY-YIG nuclease family protein insig. 41 88
o Pantoea sp. MT58 IAI47_16950 GIY-YIG nuclease family protein insig. 46 84
o Rahnella sp. WP5 EX31_RS08465 GIY-YIG nuclease family protein insig. 42 86
  Pectobacterium carotovorum WPP14 HER17_RS18145 GIY-YIG nuclease family protein cofit 41 71
  Erwinia tracheiphila SCR3 LU632_RS20990 GIY-YIG nuclease family protein insig. 43 71
  Shewanella sp. ANA-3 Shewana3_0136 excinuclease ABC subunit C (RefSeq) insig. 43 71
  Shewanella oneidensis MR-1 SO0145 hypothetical URI domain endonuclease (NCBI ptt file) insig. 42 71
  Shewanella amazonensis SB2B Sama_0145 endonuclease (RefSeq) insig. 41 75
  Marinobacter adhaerens HP15 HP15_2558 putative nuclease insig. 43 70
  Fusobacterium nucleatum SB010 HUW76_09640 GIY-YIG nuclease family protein cofit 40 60
o Pseudomonas putida KT2440 PP_0972 UPF0213 protein PP_0972 insig. 36 85
  Shewanella loihica PV-4 Shew_0038 excinuclease ABC subunit C (RefSeq) insig. 39 71
  Pseudomonas fluorescens SBW25 PFLU_RS05060 GIY-YIG nuclease family protein insig. 38 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05060 GIY-YIG nuclease family protein insig. 38 74
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5411 FIG00955494: hypothetical protein insig. 37 80
  Alteromonas macleodii MIT1002 MIT1002_02877 GIY-YIG nuclease superfamily protein insig. 39 69
  Pseudomonas simiae WCS417 PS417_04990 GIY-YIG nuclease insig. 38 74
  Pseudomonas fluorescens FW300-N2C3 AO356_17425 GIY-YIG nuclease insig. 37 80
  Pseudomonas sp. RS175 PFR28_03536 hypothetical protein insig. 39 78
  Rhodanobacter sp. FW510-T8 OKGIIK_00785 GIY-YIG nuclease family protein insig. 38 70
  Pseudomonas fluorescens FW300-N2E3 AO353_04580 GIY-YIG nuclease insig. 40 70
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_908 FIG00955494: hypothetical protein no data 40 70
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1705 FIG00955494: hypothetical protein insig. 39 69
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1064 Predicted endonuclease containing a URI domain insig. 39 71
  Pseudomonas syringae pv. syringae B728a Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 36 74
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 36 74
  Pseudomonas stutzeri RCH2 Psest_1218 Predicted endonuclease containing a URI domain insig. 37 74
  Pseudomonas sp. S08-1 OH686_17835 Endo/excinuclease domain protein insig. 43 59
  Herbaspirillum seropedicae SmR1 HSERO_RS02335 excinuclease ABC subunit C insig. 36 70
  Magnetospirillum magneticum AMB-1 AMB_RS11455 GIY-YIG nuclease family protein cofit 46 44
  Acidovorax sp. GW101-3H11 Ac3H11_2277 putative periplasmic protein kinase ArgK and related GTPases of G3E family sig. 33 75
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00620 GIY-YIG nuclease family protein insig. 34 69
  Variovorax sp. SCN45 GFF7600 no description no data 74 22