| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0427 | | conserved hypothetical protein | insig. | 100 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0427 | | conserved hypothetical protein | insig. | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_09200 | | methyltransferase | insig. | 81 | 98 |
| o | Pseudomonas sp. RS175 | PFR28_05026 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 81 | 97 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3724 | | FIG025233: SAM-dependent methyltransferases | insig. | 80 | 97 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_248 | | FIG025233: SAM-dependent methyltransferases | insig. | 81 | 97 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1515 | | FIG025233: SAM-dependent methyltransferases | insig. | 80 | 97 |
| o | Pseudomonas sp. DMC3 | GFF3116 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 81 | 97 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_12630 | | methyltransferase | insig. | 80 | 97 |
| o | Pseudomonas sp. SVBP6 | COO64_RS13150 | | class I SAM-dependent methyltransferase | insig. | 80 | 97 |
| o | Pseudomonas simiae WCS417 | PS417_02055 | | methyltransferase | insig. | 76 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00644 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 77 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS02100 | | class I SAM-dependent methyltransferase | insig. | 76 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS02100 | | class I SAM-dependent methyltransferase | insig. | 76 | 100 |
| o | Pseudomonas sp. S08-1 | OH686_09950 | | SAM-dependent | cofit | 71 | 94 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS03890 | | class I SAM-dependent methyltransferase | insig. | 61 | 93 |
| o | Ralstonia solanacearum GMI1000 | RS_RS18860 | | class I SAM-dependent methyltransferase | insig. | 64 | 94 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS15110 | | methyltransferase | insig. | 61 | 96 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03967 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 62 | 95 |
| o | Paraburkholderia graminis OAS925 | ABIE53_003194 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 61 | 93 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS07135 | | methyltransferase | insig. | 55 | 94 |
| | Shewanella oneidensis MR-1 | SO1988 | | hypothetical methyltransferase (NCBI ptt file) | insig. | 32 | 63 |
| | Shewanella sp. ANA-3 | Shewana3_2463 | | methyltransferase type 11 (RefSeq) | insig. | 31 | 64 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS00510 | | class I SAM-dependent methyltransferase | insig. | 43 | 41 |
| | Shewanella amazonensis SB2B | Sama_2034 | | methyltransferase (RefSeq) | insig. | 32 | 63 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_10215 | | methyltransferase | strong | 31 | 64 |
| | Xanthobacter sp. DMC5 | GFF4148 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 42 | 45 |
| | Bosea sp. OAE506 | ABIE41_RS12470 | | metalloregulator ArsR/SmtB family transcription factor | insig. | 41 | 41 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1971 | | SAM-dependent methyltransferases | sig. | 28 | 67 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01600 | | class I SAM-dependent methyltransferase | cofit | 30 | 64 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26120 | | SAM-dependent methyltransferase | insig. | 28 | 70 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS04905 | | class I SAM-dependent methyltransferase | insig. | 39 | 41 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05125 | | class I SAM-dependent methyltransferase | insig. | 39 | 41 |
| | Mycobacterium tuberculosis H37Rv | Rv1523 | | Probable methyltransferase | insig. | 32 | 42 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2344 | | SAM-dependent methyltransferases | insig. | 28 | 67 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_14715 | | Biotin synthase | insig. | 28 | 69 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22920 | | malonyl-ACP O-methyltransferase BioC | cofit | 33 | 56 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04705 | | class I SAM-dependent methyltransferase | insig. | 32 | 64 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS07920 | | metalloregulator ArsR/SmtB family transcription factor | strong | 34 | 47 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4498 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 34 | 45 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_11865 | | methyltransferase | sig. | 28 | 64 |
| | Enterobacter sp. TBS_079 | MPMX20_04447 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 35 | 42 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3105 | | Methyltransferase domain | strong | 34 | 47 |
| | Agrobacterium fabrum C58 | Atu2124 | | transcriptional regulator, ArsR family | sig. | 32 | 63 |
| | Variovorax sp. SCN45 | GFF304 | | Ubiquinone/menaquinone biosynthesis methyltransferase family protein | insig. | 33 | 48 |
| | Rhodopseudomonas palustris CGA009 | TX73_008295 | | class I SAM-dependent methyltransferase | insig. | 33 | 46 |
| | Escherichia coli BL21 | ECD_03726 | | bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase | no data | 32 | 45 |
| | Mycobacterium tuberculosis H37Rv | Rv0839 | | Conserved hypothetical protein | insig. | 35 | 40 |
| | Pseudomonas sp. S08-1 | OH686_09385 | | SAM-dependent methyltransferase (UbiE paralog) | insig. | 31 | 45 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0664 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 31 | 57 |
| | Pseudomonas segetis P6 | MPMX49_01036 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 30 | 50 |
| | Mycobacterium tuberculosis H37Rv | Rv3030 | | Conserved protein | no data | 33 | 57 |
| | Mycobacterium tuberculosis H37Rv | Rv3038c | | Conserved protein | no data | 32 | 41 |
| | Marinobacter adhaerens HP15 | HP15_2483 | | protein containing methyltransferase type 11 domain | insig. | 31 | 50 |
| | Pseudomonas sp. DMC3 | GFF540 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | insig. | 25 | 78 |
| | Escherichia fergusonii Becca | EFB2_04782 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 32 | 45 |
| | Escherichia coli ECOR27 | NOLOHH_06435 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 45 |
| | Escherichia coli ECOR38 | HEPCGN_12935 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | strong | 32 | 45 |
| | Escherichia coli ECRC100 | OKFHMN_14305 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 45 |
| | Escherichia coli ECRC101 | MCAODC_04810 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 45 |
| | Escherichia coli ECRC102 | NIAGMN_12060 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 45 |
| | Escherichia coli ECRC62 | BNILDI_05095 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 45 |
| | Escherichia coli ECRC98 | JDDGAC_17930 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 45 |
| | Escherichia coli ECRC99 | KEDOAH_13845 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 45 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04218 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 32 | 45 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22115 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 45 |
| | Escherichia coli BW25113 | b3833 | ubiE | ubiquinone/menaquinone biosynthesis methyltransferase (NCBI) | no data | 32 | 45 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 30 | 55 |
| | Methylophilus sp. DMC18 | GFF1685 | | Malonyl-[acyl-carrier protein] O-methyltransferase | cofit | 34 | 41 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0606 | | transcriptional regulator, ArsR family/methyltransferase, UbiE/COQ5 family (TIGR) | strong | 30 | 53 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS20570 | | class I SAM-dependent methyltransferase | insig. | 29 | 73 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS20570 | | class I SAM-dependent methyltransferase | strong | 29 | 73 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4248 | | SAM-dependent methyltransferases | sig. | 28 | 64 |
| | Pseudomonas simiae WCS417 | PS417_18590 | | SAM-dependent methyltransferase | sig. | 28 | 71 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS14205 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | insig. | 29 | 50 |
| | Azospirillum sp. SherDot2 | MPMX19_01135 | | putative methyltransferase YcgJ | insig. | 29 | 69 |
| | Caulobacter crescentus NA1000 | CCNA_02225 | | ArsR family/SAM-dependent transcriptional regulator | strong | 33 | 41 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02225 | | ArsR family/SAM-dependent transcriptional regulator | cofit | 33 | 41 |
| | Dickeya dadantii 3937 | DDA3937_RS07275 | | class I SAM-dependent methyltransferase | insig. | 33 | 42 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_12755 | | SAM-dependent methyltransferase | insig. | 27 | 42 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF260 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) | no data | 32 | 45 |
| | Pantoea sp. MT58 | IAI47_18285 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 44 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS15265 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 44 |
| | Klebsiella michiganensis M5al | BWI76_RS01305 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 28 | 65 |
| | Variovorax sp. OAS795 | ABID97_RS16745 | | class I SAM-dependent methyltransferase | cofit | 38 | 43 |
| | Serratia liquefaciens MT49 | IAI46_06535 | | malonyl-ACP O-methyltransferase BioC | insig. | 36 | 45 |
| | Pseudomonas sp. SVBP6 | COO64_RS05655 | | class I SAM-dependent methyltransferase | insig. | 33 | 57 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09795 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 32 | 45 |
| | Enterobacter sp. TBS_079 | MPMX20_01405 | | Malonyl-[acyl-carrier protein] O-methyltransferase | sig. | 33 | 44 |
| | Pseudomonas sp. RS175 | PFR28_04548 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | insig. | 26 | 64 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05895 | | Methylase involved in ubiquinone/menaquinone biosynthesis | no data | 29 | 70 |
| | Erwinia amylovora T8 | OLJFJH_06500 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 29 | 61 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2579 | | transcriptional regulator, ArsR family (RefSeq) | no data | 30 | 50 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03946 | | putative methyltransferase YcgJ | cofit | 28 | 71 |
| | Pseudomonas segetis P6 | MPMX49_00386 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | strong | 27 | 64 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS10075 | | methyltransferase domain-containing protein | insig. | 35 | 45 |
| | Rhodospirillum rubrum S1H | Rru_A1529 | | Transcriptional Regulator, ArsR family (NCBI) | cofit | 34 | 48 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16515 | | methyltransferase domain-containing protein | insig. | 34 | 56 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0596 | | delta(24)-sterol C-methyltransferase | strong | 32 | 43 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05067 | | ubiquinone/menaquinone biosynthesis methyltransferase | strong | 28 | 48 |