Homologs of xerD from Escherichia coli ECRC100

xerD: integrase
SEED: Integrase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli ECRC100 OKFHMN_26010 xerD integrase cofit 100 100
o Escherichia coli ECRC101 MCAODC_19380 xerD integrase insig. 100 100
o Escherichia coli ECRC99 KEDOAH_02080 xerD integrase no data 100 100
o Escherichia coli ECRC98 JDDGAC_00600 xerD integrase cofit 100 100
o Escherichia coli ECRC102 NIAGMN_02040 xerD integrase insig. 99 100
o Escherichia coli ECOR38 HEPCGN_04445 xerD integrase insig. 100 87
o Pectobacterium carotovorum WPP14 HER17_RS07965 tyrosine-type recombinase/integrase insig. 63 100
o Erwinia tracheiphila SCR3 LU632_RS03480 tyrosine-type recombinase/integrase insig. 57 99
o Dickeya dadantii 3937 DDA3937_RS04115 site-specific integrase insig. 56 99
o Dickeya dianthicola ME23 DZA65_RS04005 site-specific integrase insig. 56 99
o Dickeya dianthicola 67-19 HGI48_RS02890 tyrosine-type recombinase/integrase insig. 55 100
o Escherichia coli ECRC62 BNILDI_11500 xerD integrase cofit 55 99
o Pantoea sp. MT58 IAI47_02995 tyrosine-type recombinase/integrase insig. 52 99
  Pectobacterium carotovorum WPP14 HER17_RS18625 tyrosine-type recombinase/integrase cofit 52 100
o Klebsiella michiganensis M5al BWI76_RS09185 integrase insig. 52 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02862 Tyrosine recombinase XerD insig. 53 99
o Escherichia fergusonii Becca EFB2_03259 Tyrosine recombinase XerC insig. 53 99
o Enterobacter sp. TBS_079 MPMX20_03950 Tyrosine recombinase XerC strong 52 100
  Pectobacterium carotovorum WPP14 HER17_RS05350 site-specific integrase insig. 51 99
o Escherichia coli BL21 ECD_00815 integrase for prophage insig. 52 92
o Burkholderia phytofirmans PsJN BPHYT_RS01250 integrase insig. 44 99
o Pseudomonas sp. S08-1 OH686_07985 Phage integrase cofit 47 91
o Pseudomonas stutzeri RCH2 Psest_4123 Site-specific recombinase XerD sig. 43 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_11165 integrase insig. 43 99
o Marinobacter adhaerens HP15 HP15_3093 phage integrase family protein insig. 42 98
  Pseudomonas stutzeri RCH2 Psest_2903 Site-specific recombinase XerD insig. 42 98
  Escherichia coli ECRC98 JDDGAC_09320 integrase strong 39 98
o Rahnella sp. WP5 EX31_RS18465 tyrosine-type recombinase/integrase insig. 39 99
  Escherichia coli ECRC101 MCAODC_20995 int Integrase insig. 38 99
  Erwinia tracheiphila SCR3 LU632_RS01475 tyrosine-type recombinase/integrase sig. 36 99
o Enterobacter asburiae PDN3 EX28DRAFT_0878 Site-specific recombinase XerD insig. 39 99
  Pseudomonas stutzeri RCH2 Psest_3052 Site-specific recombinase XerD insig. 37 99
  Erwinia tracheiphila SCR3 LU632_RS21160 tyrosine-type recombinase/integrase no data 46 49
  Escherichia coli ECOR38 HEPCGN_26815 xerD integrase insig. 73 20
  Rhodanobacter denitrificans MT42 LRK55_RS00045 site-specific integrase insig. 33 67
  Sinorhizobium meliloti 1021 SMc02397 integrase insig. 31 80
  Enterobacter sp. TBS_079 MPMX20_02833 hypothetical protein strong 62 20
o Agrobacterium fabrum C58 Atu1194 phage-related integrase insig. 26 91
  Lysobacter sp. OAE881 ABIE51_RS07380 site-specific integrase strong 27 68
  Magnetospirillum magneticum AMB-1 AMB_RS18470 site-specific integrase insig. 29 67
  Shewanella oneidensis MR-1 SO_A0045 site-specific recombinase, phage integrase family (NCBI) insig. 32 61
  Magnetospirillum magneticum AMB-1 AMB_RS20435 DUF4102 domain-containing protein insig. 27 86
  Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 29 63
  Caulobacter crescentus NA1000 CCNA_03101 site-specific tyrosine recombinase XerD strong 28 62
  Caulobacter crescentus NA1000 Δfur CCNA_03101 site-specific tyrosine recombinase XerD cofit 28 62
  Dinoroseobacter shibae DFL-12 Dshi_3213 integrase family protein (RefSeq) insig. 29 59
  Alteromonas macleodii MIT1002 MIT1002_00157 Tyrosine recombinase XerC insig. 29 50
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 31 49
  Dechlorosoma suillum PS Dsui_1127 site-specific recombinase XerD cofit 25 78
  Rhodopseudomonas palustris CGA009 TX73_000945 tyrosine recombinase XerC sig. 33 34
  Bifidobacterium breve UCC2003 BBR_RS16755 site-specific tyrosine recombinase XerD strong 30 47
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15025 tyrosine recombinase XerC strong 29 68
  Ralstonia solanacearum UW163 UW163_RS23220 recombinase XerC insig. 32 46
  Castellaniella sp019104865 MT123 ABCV34_RS00515 site-specific tyrosine recombinase XerD insig. 28 60
  Escherichia coli ECOR27 NOLOHH_00750 intD Prophage integrase IntD insig. 28 60
  Escherichia coli BW25113 b0537 intD DLP12 prophage; predicted integrase (NCBI) sig. 28 60
  Azospirillum brasilense Sp245 AZOBR_RS30360 integrase insig. 27 67
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2764 Site-specific recombinase XerD sig. 29 41
  Magnetospirillum magneticum AMB-1 AMB_RS04775 integrase insig. 28 51
  Ralstonia solanacearum GMI1000 RS_RS17610 recombinase XerC insig. 32 46
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3595 Site-specific recombinase XerD sig. 29 63
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14800 hypothetical protein insig. 29 53
  Phaeobacter inhibens DSM 17395 PGA1_c00260 putative phage integrase, catalytic core insig. 27 98
  Escherichia coli BL21 ECD_00486 DLP12 prophage; putative phage integrase insig. 27 60
  Rhodanobacter denitrificans MT42 LRK55_RS08300 tyrosine recombinase XerC strong 29 67
  Azospirillum sp. SherDot2 MPMX19_02110 Tyrosine recombinase XerC no data 29 33
  Rhodospirillum rubrum S1H Rru_A1220 Phage integrase (NCBI) no data 26 60
  Ralstonia solanacearum UW163 UW163_RS11435 site-specific integrase insig. 27 86
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12210 tyrosine recombinase XerC insig. 29 33
  Escherichia coli ECRC100 OKFHMN_09660 xerD integrase insig. 26 83
  Escherichia coli ECRC98 JDDGAC_13285 xerD integrase cofit 26 83
  Escherichia coli ECRC102 NIAGMN_07520 xerD integrase insig. 26 86
  Dinoroseobacter shibae DFL-12 Dshi_5002 xerC hypothetical protein (NCBI) no data 27 37
  Phaeobacter inhibens DSM 17395 PGA1_c14060 tyrosine recombinase XerD strong 26 69
  Escherichia coli ECRC101 MCAODC_00180 xerD Site-specific recombinase XerD insig. 25 86
  Bosea sp. OAE506 ABIE41_RS07870 tyrosine recombinase XerC strong 31 37
  Pseudomonas putida KT2440 PP_2297 putative integrative genetic element Ppu40, integrase insig. 29 60
  Bacteroides ovatus ATCC 8483 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein insig. 28 58
  Desulfovibrio vulgaris Hildenborough JW710 DVU2197 site-specific recombinase, phage integrase family (TIGR) insig. 28 58
  Pseudomonas fluorescens FW300-N2C3 AO356_12725 recombinase XerC strong 27 64
  Rhodanobacter sp. FW510-T8 OKGIIK_15325 xerC tyrosine recombinase XerC no data 27 67
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01966 Site-specific recombinase XerD insig. 26 88
  Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 31 38
  Pseudomonas fluorescens GW456-L13 PfGW456L13_842 Tyrosine recombinase XerC sig. 29 40
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0827 Site-specific recombinase XerD insig. 27 61
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08535 tyrosine recombinase XerC insig. 26 67
  Castellaniella sp019104865 MT123 ABCV34_RS02095 site-specific integrase insig. 31 66
  Phaeobacter inhibens DSM 17395 PGA1_c05760 putative tyrosine recombinase XerC strong 29 40
  Pseudomonas sp. RS175 PFR28_04378 Tyrosine recombinase XerC strong 27 64
  Pseudomonas sp. S08-1 OH686_13785 tyrosine recombinase XerC insig. 31 36
  Pseudomonas syringae pv. syringae B728a Psyr_0185 tyrosine recombinase XerC subunit sig. 29 40
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0185 tyrosine recombinase XerC subunit sig. 29 40
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 28 56
  Azospirillum brasilense Sp245 AZOBR_RS03965 tyrosine recombinase XerC no data 26 57
  Pseudomonas fluorescens SBW25 PFLU_RS29280 tyrosine recombinase XerC sig. 30 38
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29280 tyrosine recombinase XerC strong 30 38
  Pseudomonas simiae WCS417 PS417_27595 recombinase XerC sig. 30 38
  Dinoroseobacter shibae DFL-12 Dshi_0395 integrase family protein (RefSeq) insig. 28 66
  Cupriavidus basilensis FW507-4G11 RR42_RS19640 hypothetical protein insig. 28 80
  Pseudomonas fluorescens FW300-N2E3 AO353_09050 recombinase XerC sig. 26 79